>CALCYCLIN (RABBIT, CA2+); SWP:P30801; PDB:1A03A MASPLDQAIGLLIGIFHKYSGKEGDKHTLSKKELKELIQKELTIG 642111111111011011111233321111111111112222344 SKLQDAEIVKLMDDLDRNKDQEVNFQEYITFLGALAMIYNEALKG 443332222111122123221100000001101111122223245 >TUMOR SUPPRESSOR P16INK4A; SWP:P42771; PDB:1A5E_ MEPAAGSSMEPSADWLATAAARGRVEEVRALLEAGALPNAPNSYG 999999764332100000000000000000000000000010100 RRPIQVMMMGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF 100000000000000000000000000000000000000000000 LDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAG 000000000000000000011000000000000000000000001 GTRGSNHARIDAAEGPSDIPD 224566677999999999999 >B-MYB; SWP:Q03237; PDB:1A5J_ GIPDLVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQC 999999999888755543355468878876654554568887876 RERWHNHLNPEVKKSSWTEEEDRIIFEAHKVLGNRWAEIAKLLPG 654345544455788643453355467779997654554567687 RTDNAVKNHWNSTIKRKVDT 65465356568877999999 >GAG POLYPROTEIN; SWP:P03322; PDB:1A6S_ GEAVIKVISSACKTYCGKTSPSKKEIGAMLSLLQKEGLLMSPSDL 110000000000000001122210000000000000011111111 YSPGSWDPITAALSQRAMILGKSGELKTWGLVLGALKAAREE 111100000000000001123331100000000000000001 >LEUKEMIA INHIBITORY FACTO; SWP:P15018; PDB:1A7M_ SPLPITPVNATCAIRHPCHGNLMNQIKNQLAQLNGSANALFISYY 998776543221233222221010000000000000000000000 TAQGEPFPNNLDKLCGPNVTDFPPFHANGTEKAKLVELYRMVAYL 000000000000000112221000001110000000000000000 SASLTNITRDQKVLNPSAVSLHSKLNATIDVMRGLLSNVLCRLCN 000000000000000000000000000000000000000000124 KYRVGHVDVPPVPDHSDKEVFQKKKLGCQLLGTYKQVISVVVQAF 211122111121110110000000000000000000000000000 >ALPHA-T-ALPHA; SWP:NA; PDB:1ABZ_ DWLKARVEQELQALEARGTDSNAELRAMEAKLKAEIQK 11000000000000011121111100000000011112 >NATURAL SCORPION PEPTIDE; SWP:P56215; PDB:1ACW_ VSCEDCPEHCSTQKAQAKCDNDKCVCEPI 00000000000000000000000000001 >P22 C2 REPRESSOR; SWP:P69202; PDB:1ADR_ MNTQLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEP 754210000000000000000000000000000000000111000 NGENLLALSKALQCSPDYLLKGDLSQTNVAY 0000000000000000000111134668899 >ACTINORHODIN POLYKETIDE S; SWP:Q02054; PDB:1AF8_ MATLLTTDDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLAL 653110000000000111223443223210011001112110110 METAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA 00000011111111111110100000000000000000012 >ANTIFUNGAL PROTEIN FROM A; SWP:P17737; PDB:1AFP_ ATYNGKCYKKDNICKYKAQSGKTAICKCYVKKCPRDGAKCEFDSY 000000000000000001112221000011000000000000011 KGKCYC 110000 >OMEGA-AGATOXIN-IVB; SWP:P37045; PDB:1AGG_ EDNCIAEDYGKCTWGGTKCCRGRPCRCSMIGTNCECTPRLIMEGL 631000000000001100000000000000000000013468999 SFA 999 >AGITOXIN 2; SWP:P46111; PDB:1AGT_ GVPINVSCTGSPQCIKPCKDAGMRFGKCMNRKCHCTPK 00000000000000000000000000000000000001 >SERINE PROTEASE PB92; SWP:P27693; PDB:1AH2_ AQSVPWGISRVQAPAAHNRGLTGSGVKVAVLDTGISTHPDLNIRG 321100010000000000010000000000001110100000000 GASFVPGEPSTQDGNGHGTHVAGTIAALNNSIGVLGVAPNAELYA 000011332101110000000000000011111000000000000 VKVLGASGSGSVSSIAQGLEWAGNNGMHVANLSLGSPSPSATLEQ 000011321100000000000000010000000011111110000 AVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQNNNR 000000000000000011222110000001210000000112211 ASFSQYGAGLDIVAPGVNVQSTYPGSTYASLNGTSMATPHVAGAA 111111111000000000000001111000000000000000000 ALVKQKNPSWSNVQIRNHLKNTATSLGSTNLYGSGLVNAEAATR 00000001100000000000000011223211110000000001 >INITIATION FACTOR 1; SWP:P69222; PDB:1AH9_ AKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIR 542100000000000000000000000000000000111111121 ILTGDKVTVELTPYDLSKGRIVFRSR 00000000000011000000001357 >ANTHOPLEURIN-A; SWP:P01530; PDB:1AHL_ GVSCLCDSDGPSVRGNTLSGTLWLYPSGCPSGWHNCKAHGPTIGW 100000111234554211000000000000000000011101100 CCKQ 0000 >ENDOGLUCANASE Z; SWP:P07103; PDB:1AIW_ MGDCANANVYPNWVSKDWAGGQPTHNEAGQSIVYKGNLYTANWYT 421111000000000122221100000000000000000000000 ASVPGSDSSWTQVGSCN 00000111000000012 >TROPONIN C; SWP:P09860; PDB:1AJ4_ ADIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMR 000000000000000000000000000000000000000000000 MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 000000000000000000000000000000000000000000000 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEEL 000000000000000000000000000000000000000000000 MKDGDKNNDGRIDYDEFLEFMKGVE 0000000000000000000000000 >APOKEDARCIDIN; SWP:P41249; PDB:1AKP_ ASAAVSVSPATGLADGATVTVSASGFATSTSATALQCAILADGRG 210000000000000000000000001000000000000000000 ACNVAEFHDFSLSGGEGTTSVVVRRSFTGYVMPDGPEVGAVDCDT 000000000000110000000000000000011101000000000 APGGCEIVVGGNTGEYGNAAISFG 000000000000110000000001 >ARGININE REPRESSOR; SWP:P0A6D0; PDB:1AOY_ MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSK 976421000000000000000000000000000000000000000 VSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTT 000000000000000000000000011234679 >MODIFIER PROTEIN 1; SWP:P83917; PDB:1AP0_ HMVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTW 999999999875310000000000010000000001122210000 EPEENLDCPDLIAEFLQSQKTAHETDKS 0000000000000000111233456799 >ANTHOPLEURIN-B; SWP:P01531; PDB:1APF_ GVPCLCDSDGPRPRGNTLSGILWFYPSGCPSGWHNCKAHGPNIGW 000000012344565321000000000000000000000000000 CCKK 0000 >COMPLEMENT PROTEASE C1R; SWP:P00736; PDB:1APQ_ AVDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQE 765311124467889877541000000000100000000100001 DRHSCQAE 10000002 >ACYLPHOSPHATASE; SWP:P00818; PDB:1APS_ STARPLKSVDYEVFGRVQGVCFRMYAEDEARKIGVVGWVKNTSKG 533210000000012322211111110000011000000011222 TVTGQVQGPEEKVNSMKSWLSKVGSPSSRIDRTNFSNEKTISKLE 100000002011100000000112233321210001000001111 YSNFSVRY 11000111 >CARTILAGE MATRIX PROTEIN; SWP:P05099; PDB:1AQ5A GSHMEEDPCECKSIVKFQTKVEELINTLQQKLEAVAKRIEALENK 999742100000000000000000000000000000000000000 II 00 >NEBULIN; SWP:P20929; PDB:1ARK_ TAGKIFRAMYDYMAADADEVSFKDGDAIINVQAIDEGWMYGTVQR 532110000000001111000000000011111122100000000 TGRTGMLPANYVEAI 000000000000001 >ASCARIS TRYPSIN INHIBITOR; SWP:P19398; PDB:1ATA_ EAEKCTKPNEQWTKCGGCEGTCAQKIVPCTRECKPPRCECIASAG 000000000000000000000000000000000000000000000 FVRDAQGNCIKFEDCPK 00000000000000000 >ATX IA; SWP:P01533; PDB:1ATX_ GAACLCKSDGPNTRGNSMSGTIWVFGCPSGWNNCEGRAIIGYCCK 100000112334354311100000111111000001111100000 Q 1 >SACY; SWP:P15401; PDB:1AUUA MKIKRILNHNAIVVKDQNEEKILLGAGIAFNKKKNDIVDPSKIEK 000000000000000000000000000000000000000000000 TFIRKDTPDY 0000111333 >SPOIIAA; SWP:P10727; PDB:1AUZ_ SLGIDMNVKESVLCIRLTGELDHHTAETLKQKVTQSLEKDDIRHI 100000000000000000000000000000000000000000000 VLNLEDLSFMDSSGLGVILGRYKQIKQIGGEMVVCAISPAVKRLF 000000000000000000000000001120000000000000000 DMSGLFKIIRFEQSEQQALLTLGVAS 00000000000000000000000101 >MENKES COPPER-TRANSPORTIN; SWP:Q04656; PDB:1AW0_ LTQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTV 100000000000100000000000000000000000000000000 EYDPLLTSPETLRGAIEDMGFDATLSD 000000000000000000000000002 >BRUTON'S TYROSINE KINASE; SWP:Q06187; PDB:1AWW_ GSMSTSELKKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWR 999754321000000000000000000000000000011100000 ARDKNGQEGYIPSNYVTEAEDS 0000000000000000000135 >ATRACOTOXIN-HVI; SWP:P56207; PDB:1AXH_ SPTCIPSGQPCPYNENCCSQSCTFKENENGNTVKRCD 4200000000000000000000000000000000000 >ANTIFUNGAL PROTEIN 1; SWP:P30231; PDB:1AYJ_ KLCERPSGTWSGVCGNNNACKNQCINLEKARHGSCNYVFPAHKCI 100000110010000000000000000000000000111110000 CYFPC 00011 >CELLOBIOHYDROLASE I; SWP:P62694; PDB:1AZ6_ TQSHAGQCGGIGYSGPTVCASGTTCQVLNPYYSQCL 443331001112233432222221000000000001 >PROTEIN (PRION PROTEIN); SWP:P04273; PDB:1B10A LGGYMLGSAMSRPMMHFGNDWEDRYYRENMNRYPNQVYYRPVDQY 111000000011111101000000000000000000000000011 NNQNNFVHDCVNITIKQHTVTTTTKGENFTETDIKIMERVVEQMC 100000000000000000000000110000000000000000000 TTQYQKESQAYYDG 00000000000012 >DNA REPAIR PROTEIN RAD51; SWP:Q06609; PDB:1B22A MAMQMQLEANADTSVEEESFGPQPISRLEQCGINANDVKKLEEAG ---------------322221100000000000000000000000 FHTVEAVAYAPKKELINIKGISEAKADKILAEAAKLVPMGFTTAT 0000001110000000000000000000000000000124----- EFHQRRSEIIQITTGSKELDKLLQ ------------------------ >PROTEIN (NEUROTOXIN CSE-I; SWP:P01491; PDB:1B3CA KDGYLVEKTGCKKTCYKLGENDFCNRECKWKHIGGSYGYCYGFGC 100000111111000000000000000011121111000000000 YCEGLPDSTQTWPLPNKTC 0000011111001112222 >PROTEIN (S-100 PROTEIN, B; SWP:P04631; PDB:1B4CA MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFL 000000000000000000000000000000000000000000000 EEIKEQEVVDKVMETLDEDGDGECDFQEFMAFVSMVTTACHEFFE 000000000000000000000000000000000000000011111 HE 11 >PROTEIN (HUMAN THIOLTRANS; SWP:P35754; PDB:1B4QA AQEFVNSKIQPGKVVVFIKPTCPYSRRAQEILSQLPIKQGLLEFV 000000000000000000000000000000000000000000000 DITATNHTNEIQDYLQQLTGARTVPRVFIGKDSIGGSSDLVSLQQ 000000000000000000000000000000000000000000000 SGELLTRLKQIGALQ 000000000000000 >PROTEIN (PKD1_HUMAN); SWP:P98161; PDB:1B4RA ATLVGPHGPLASGQLAAFHIAAPLPVTATRWDFGDGSAEVDAAGP 000000000000000000000000000000000000000000000 AASHRYVLPGRYHVTAVLALGAGSALLGTDVQVEA 00000000000000000000000000000000000 >ELONGATION FACTOR 1-BETA; SWP:P24534; PDB:1B64_ MLVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVP 531000000000000000000000000000000100000000000 VGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNK 111000000000000110000000000000000000000000000 I 1 >PROTEIN (MAJOR POLLEN ALL; SWP:P15494; PDB:1B6FA GVFNYETETTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIE 100000000000000000000000000000000000000000000 GNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGP 111000000000001222110000000000000000000000000 IGDTLEKISNEIKIVATPDGGSILKISNKYHTKGDHEVKAEQVKA 011000000000000001110000000000000110000000000 SKELGETLLRAVESYLLAHSDAYN 000000000000000000123467 >PROTEIN (CRP1); SWP:P67966; PDB:1B8TA MPNWGGGKKCGVCQKAVYFAEEVQCEGSSFHKSCFLCMVCKKNLD 999999999999999999999999999999999999999999999 STTVAVHGDEIYCKSCYGKKYGPKGKGKGMGAGTLSTDKGESLGI 999999999999999999999999999999999999999999999 KYEEGQSHRPTNPNASRMAQKVGGSDGCPRCGQAVYAAEKVIGAG 999999999999999999999999999999999999999999999 KSWHKSCFRCAKCGKSLESTTLADKDGEIYCKGCYAKNFGPKGFG 999999999999999999999999999999999999999999999 FGQGAGALIHSQ 999999999999 >PROTEIN (DEFENSIN-LIKE PE; SWP:P82172; PDB:1B8WA FVQHRPRDCESINGVCRHKDTVNCREIFLADCYNDGQKCCRK 643211000000000000000000000000000000000000 >PROTEIN (COLLAGEN ALPHA 1; SWP:P32018; PDB:1B9PA CAVELRSPGISRFRRKIAKRSIKTLEHKRENAKE 0000000000000000000000000000000000 >PROTEIN (TERPREDOXIN); SWP:P33007; PDB:1B9RA PRVVFIDEQSGEYAVDAQDGQSLMEVATQNGVPGIVAECGGSCVC 000000000000000000000000000000000111111111111 ATCRIEIEDAWVEIVGEANPDENDLLQSTGEPMTAGTRLSCQVFI 010000000000000011000000000011110010000000000 DPSMDGLIVRVPLPA 000000000001124 >G-PROTEIN COUPLED RECEPTO; SWP:P25098; PDB:1BAK_ GSHMGKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGEA 998542100000000001121111100000000000000012332 PQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFILQCDSDPELV 210000000000000000000000000000000000000000000 QWKKELRDAYREAQQLVQRVPKMKNKPRS 00000000000000010113467789999 >DIHYDROLIPOAMIDE SUCCINYL; SWP:P0AFG6; PDB:1BAL_ YASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVE 998987776532111000000000011111111122211000000 KHLAKA 001246 >HUMAN ENHANCER-BINDING PR; SWP:P15822; PDB:1BBO_ KYICEECGIRKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLT ----1-----10000000000000000000000000000000000 KHMKSKAHSKK 00000111124 >7-FE FERREDOXIN; SWP:Q45560; PDB:1BC6_ AYVITEPCIGTKDASCVEVCPVDCIHEGEDQYYIDPDVCIDCGAC 000000000012211000000000000000000000000001100 EAVCPVSAIYHEDFVPEEWKSYIQKNRDFFKK 00001100000000000000000000000013 >VPR PROTEIN; SWP:P12520; PDB:1BDE_ YGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIG 321000000000000000000000000011346 >BDS-I; SWP:P11494; PDB:1BDS_ AAPCFCSGKPGRGDLWILRGTCPGGYGYTSNCYKWPNICCYPH 0000000000000000000000000000000000000000000 >CHAPERONE PROTEIN FIMC; SWP:P31697; PDB:1BF8_ GVALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVENADGVKD 211111110001112210000001111100000000001111111 GRFIVTPPLFAMKGKKENTLRILDATNNQLPQDRESLFWMNVKAI 100000000000001110000000001121111111000000000 PSMDKSKLTENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFRR 113467899986432111110000000111111100000000000 SANSLTLINPTPYYLTVTELNAGTRVLENALVPPMGESTVKLPSD 111000000000000000000001000000000100000000111 AGSNITYRTINDYGALTPKMTGVM 111000000111111111111001 >BGK; SWP:P29186; PDB:1BGK_ VCRDWFKETACRHAKSLGNCRTSQKYRANCAKTCELC 1100000000000000000000000000000000001 >CRE-BP1; SWP:NA; PDB:1BHI_ MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG 86532000011111000000000000000000123356 >TOXIN BMTX1; SWP:NA; PDB:1BIG_ FTDVKCTGSKQCWPVCKQMFGKPNGKCMNGKCRCYS 001100000000000000000000000000000001 >PROTEIN DISULFIDE ISOMERA; SWP:NA; PDB:1BJX_ AATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAID 000000000000000000000000000000000000000000001 DIPFGITSNSDVFSKYQLDKDGVVLFKKFDEGRNNFEGEVTKENL 000000000000000000000000000000000000000000000 LDFIKHNQLPLVIEFTEQTA 00000000112345799999 >ANTIMICROBIAL PROTEIN 1; SWP:NA; PDB:1BK8_ LCNERPSQTWSGNCGNTAHCDKQCQDWEKASHGACHKRENHWKCF 000000000010001000000000000000000000000000000 CYFNC 00000 >BMKTX; SWP:NA; PDB:1BKT_ VGINVKCKHSGQCLKPCKDAGMRFGKCINGKCDCTPK 1000000000000000000000000000000000000 >PARATHYROID HORMONE RECEP; SWP:NA; PDB:1BL1_ SEAVKFLTNETREREVFDRLGMIYTVGYSVC 0000000000000000000000000000000 >P55 BLK PROTEIN TYROSINE; SWP:NA; PDB:1BLJ_ GSVAPVETLEVEKWFFRTISRKDAERQLLAPMNKAGSFLIRESES 998766544321000010000000000000000000000000001 NKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQA 110000000000011000000000000001000000000000000 LVQHYSKKGDGLCQKLTLPCVNLA 000000001000000000001124 >PROTEIN (MOLONEY MURINE L; SWP:NA; PDB:1BM4A CAKVKGITQGPNESPSAFLERLKEAYRRYTPY 99999999996532110000000000001134 >LQH III ALPHA-LIKE TOXIN; SWP:NA; PDB:1BMR_ VRDGYIAQPENCVYHCFPGSSGCDTLCKEKGGTSGHCGFKVGHGL 000000001110000011100000000000000000000111000 ACWCNALPDNVGIIVEGEKCHS 0000000000000012321112 >POLLEN ALLERGEN PHL P2; SWP:NA; PDB:1BMW_ VPKVTFTVEKGSNEKHLAVLVKYEGDTMAEVELREHGSDEWVAMT 321000000111111100000111111000000011112000000 KGEGGVWTFDSEEPLQGPFNFRFLTEKGMKNVFDDVVPEKYTIGA 011100000111122210000000001100000000011111111 TYAP 1111 >BOVINE NEUTROPHIL BETA-DE; SWP:NA; PDB:1BNB_ APLSCGRNGGVCIPIRCPVPMRQIGTCFGRPVKCCRSW 86531121100000001011000000000000000012 >TITIN; SWP:NA; PDB:1BPV_ SPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLP 110000000000000000000000000000000100000000000 NGRWLKANFSNILENEFTVSGLTEDAAYEFRVIAKNAAGAISPPS 101000000100000000000000000000000001000000000 EPSDAITCRDDVEA 00000000000112 >ETS-1; SWP:NA; PDB:1BQV_ MECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDPRQWT 999999999999999987654432211101000100000000000 ETHVRDWVMWAVNEFSLKGVDFQKFCMSGAALCALGKECFLELAP 000000000000000001000000000000000000000000000 DFVGDILWEHLEILQKEDVK 00000000000000012246 >BRAZZEIN; SWP:NA; PDB:1BRZ_ DKCKKVYENYPVSKCQLANQCNYDCKLDKHARSGECFYDEKRNLQ 320000011111111111000000000000000000012322100 CICDYCEY 00000134 >BARWIN, BASIC BARLEY SEED; SWP:NA; PDB:1BW3_ EQANDVRATYHYYRPAQNNWDLGAPAVSAYCATWDASKPLSWRSK 000000000111121111111121221100011111111010011 YGWTAFCGPAGPRGQAACGKCLRVTNPATGAQITARIVDQCANGG 111001111111111100000000000000000000000111221 LDLDWDTVFTKIDTNGIGYQQGHLNVNYQFVDCRD 11121110000111211111110000000000001 >INSULIN GENE ENHANCER PRO; SWP:NA; PDB:1BW5_ MKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPR 875433211100000000000000000000000000000000000 VIRVWFQNKRCKDKKRSIMMK 000000000001123345679 >PROTEIN (ALPHA-BETA T CEL; SWP:NA; PDB:1BWMA AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIH 100001111111111000000000000100000001122100000 YSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYFCA 0011111111011111----------------------------- SGGQGRAEQFFGPGTRLTVLGSDYKDDDDKRSGGGGSGGGGSGGS --1------------------------------------------ GAQQQVRQSPQSLTVWEGETTILNCSYEDSTFDYFPWYRQFPGKS --------------------------------------------- PALLIAISLVSNKKEDGRFTIFFNKREKKLSLHITDSQPGDSATY ---------------------------9----------------- FCAATGSFNKLTFGAGTRLAVSPY ------------------------ >PARATHYROID HORMONE; SWP:NA; PDB:1BWX_ SVSEIQLMHNLGKHLNSMERVEWLRKKLQDVHNFVALGA 766533323334565444333321211222334456899 >PROTEIN (HEART FATTY ACID; SWP:NA; PDB:1BWYA VDAFVGTWKLVDSKNFDDYMKSLGVGFATRQVGNMTKPTTIIEVN 011000000000100000001111112221112211100000000 GDTVIIKTQSTFKNTEISFKLGVEFDETTADDRKVKSIVTLDGGK 110000011122110000000000000111221000000001110 LVHVQKWNGQETSLVREMVDGKLILTLTHGTAVCTRTYEKQA 000000001000000000000000000001100000000011 >PROTEIN (OSMOLARITY SENSO; SWP:NA; PDB:1BXDA TGQEMPMEMADLNAVLGEVIAAESGYEREIETALYPGSIEVKMHP 987431000000000000000011111100000000000000000 LSIKRAVANMVVNAARYGNGWIKVSSGTEPNRAWFQVEDDGPGIA 000000000000000111110000000001000000000111111 PEQRKHLFQPFVRGDSARTISGTGLGLAIVQRIVDNHNGMLELGT 221122123567899999999997643210000000000000001 SERGGLSIRAWLPVPVTRAQGTTKEG 23321000000001124579999999 >PROTEIN (PIX); SWP:NA; PDB:1BY1A MKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQT 443234444321100000000000000000000000000001112 SEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGG 122111100000000000000000000000000011112110000 CFLNLMPQMKTLYLTYCANHPSAVNVLTEHSEELGEFMETKGASS 000000000000000000000000000000000001111122111 PGILVLTTGLSKPFMRLDKYPTLLKELERHMEDYHTDRQDIQKSM 110000110011110000000000000011223332111100000 AAFKNLSAQCQEVRKRKELELQILTEAIR 00000000001113434577777678999 >ANTIMICROBIAL PEPTIDE 1; SWP:NA; PDB:1C01A SAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYN 000000000001000000000000000000000000010000000 QAGCSGVAHTRFGSSARACNPFGWKSIFIQC 0000000000000000000000000000001 >PROTEIN (EPIDERMAL GROWTH; SWP:NA; PDB:1C07A TWVVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTL 101000000000000000000000000000000000000000000 LAHIWSLCDTKDCGKLSKDQFALAFHLISQKLIKGIDPPHVLTPE 000000000000000000000000000000000000000000000 MIPPS 00013 >PROTEIN (1D8 UBIQUITIN); SWP:NA; PDB:1C3TA MQLFVKTLTGKTLTVELEPSDTVENLKAKIQDKEGIPPDQQRLIF 000000000000000000000000000000000000000000000 AGKQLEDGRTLSDYNLQKESTIHLVLRLRGG 0000000000000000000000000012357 >THP12 CARRIER PROTEIN; SWP:NA; PDB:1C3YA ETPREKLKQHSDACKAESGVSEESLNKVRNREEVDDPKLKEHAFC 999987653211000000011100000011111110000000000 ILKRAGFIDASGEFQLDHIKTKFKENSEHPEKVDDLVAKCAVKKD 000000000000000000000000111211100000000000000 TPQHSSADFFKCVHDNRS 000000000100001135 >TOXIN K-BETA; SWP:NA; PDB:1C49A TISCTNEKQCYPHCKKETGYPNAKCMNRKCKCFGR 10000000000000000000000000000000112 >PROTEIN (GURMARIN); SWP:NA; PDB:1C4EA QCVKKDELCIPYYLDCCEPLECKKVNWWDHKCIG 0000000000000000000000000000000001 >BUTANTOXIN; SWP:NA; PDB:1C55A WCSTCLDLACGASRECYDPCFKAFGRAHGKCMNNKCRCYT 2110000000000000000000000000000000000001 >CYTOCHROME C6; SWP:NA; PDB:1C6S_ ADLANGAKVFSGNCAACHMGGGNVVMANKTLKKEALEQFGMYSED 200000000000000000000000011000001101111111000 AIIYQVQHGKNAMPAFAGRLTDEQIQDVAAYVLDQAAKGWAG 000000000000000100001000000000000000001013 >MAUROCALCIN; SWP:NA; PDB:1C6WA GDCLPHLKLCKENKDCCSKKCKRRGTNIEKRCR 210000000000000000000000111000000 >CALCIUM VECTOR PROTEIN; SWP:NA; PDB:1C7VA WVRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDA ------211000000000011100000000000122344332111 EVEEAMKEADEDGNGVIDIPEFMDLIKKSKNALKES 00000000001121000000000000125------- >CYTOKINE RECEPTOR COMMON; SWP:NA; PDB:1C8PA MIQMAPPSLNVTKDGDSYSLRWETMKMRYEHIDHTFEIQYRKDTA 311100000000011100000000121111210000000000000 TWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTGYNGIWS 000000000000000000000000000000000001122111100 EWSEARSWDTES 100000000001 >CASPASE-ACTIVATED DNASE; SWP:NA; PDB:1C9FA VPHMCAVLRQPKCVKLRALHSACKFGVAARSCQELLRKGCVRFQL ---753111000000000000000000000000000000000000 PMPGSRLCLYEDGTEVTDDCFPGLPNDAELLLLTAGETWHGYVSD 011100000000000000000000000000000000000000124 >CALBINDIN D9K; SWP:NA; PDB:1CB1_ SAQKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKG 653211000000000000012000000000000000011122233 PRTLDDLFQELDKNGDGEVSFEEFQVLVKKISQ 321010000101113321000000000001134 >PROTEIN (CYTOTOXIN 2); SWP:NA; PDB:1CB9A LKCKKLVPLFSKTCPAGKNLCYKMFMVAAPHVPVKRGCIDVCPKS 000000000000000000000000000000000000000000000 SLLVKYVCCNTDKCN 000000000000000 >CYTOCHROME C551; SWP:NA; PDB:1CCH_ QDGEALFKSKPCAACHSVDTKMVGPALKEVAAKNAGVEGAADTLA 000000000000000000000000000000000000000000000 LHIKNGSQGVWGPIPMPPNPVTEEEAKILAEWVLSLK 0000000000000000000000000000000000000 >CHYMOTRYPSIN INHIBITOR; SWP:NA; PDB:1CCVA EECGPNEVFNTCGSACAPTCAQPKTRICTMQCRIGCQCQEGFLRN 310000000000000000000000000000000000000000000 GEGACVLPENC 00000000000 >CD59; SWP:NA; PDB:1CDQ_ LQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQVYNKCWKFEHC 000000000011000000111000000000010000000000000 NFNDVTTRLRENELTYYCCKKDLCNFNEQLEN 00000000000000000000000001001123 >PROTEIN (MEROZOITE SURFAC; SWP:NA; PDB:1CEJA NISQHQCVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENP 543211112110000000011111110000000000000000001 NPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSYPLFDGI 100111111101000000012344421100000111211000000 FCSSSN 012358 >PATHOGENESIS-RELATED PROT; SWP:NA; PDB:1CFE_ QNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCN 110000000000000000000000000000000000000011111 LIHSGAGENLAKGGGDFTGRAAVQLWVSERPSYNYATNQCVGGKK 111221000000011100000000000000100011111111211 CRHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY 100000000000000000000012300000000000000111000 >PROTEIN (NON HISTONE PROT; SWP:NA; PDB:1CG7A MVTPREPKKRTTRKKKDPNAPKRALSAYMFFANENRDIVRSENPD 999999999999865432221221000000000000000111111 ITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRYESEKELYNA 111100000000000000000000000000000000000000000 TLA 112 >EQUINE HERPES VIRUS-1 RIN; SWP:NA; PDB:1CHC_ MATVAERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPL 000000000000000000000000000000000000000000000 CKVPVESVVHTIESDSEFGDQLI 00000000000000000000000 >CHLOROTOXIN; SWP:NA; PDB:1CHL_ MCMPCFTTDHQMARKCDDCCGGKGRGKCYGPQCLCR 110012332210000000000010000001000001 >PROTEIN (LYMPHOCYTE FUNCT; SWP:NA; PDB:1CI5A SSQQIYGVKYGNVTFHVPSNQPLKEVLWKKQKDKVAELENSEFRA 200000000000000000000000000000000000000000000 FSSFKNRVYLDTKSGSLTIYNLTSSDEDEYEMESPNITDSMKFFL 010000000000000000000000000000000000000000000 YVGES 00000 >PROTEIN (TACHYSTATIN A); SWP:NA; PDB:1CIXA YSRCQLQGFNCVVRSYGLPTIPCCRGLTCRSYFPGSTYGRCQRY 43111000000001233221110000000000121100000001 >POLYOMAVIRUS ENHANCER BIN; SWP:NA; PDB:1CL3A VVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQTRFQNAC 432111000000000000000000000000000000000000000 RDGRSEIAFVATGTNLSLQFFPASWQGEQRQTPSREYVDLEREAG 000000000000000000000000121111100000000000000 KVYLKAPMILNGVCVIWKGWIDLHRLDGMGCLEFDEERAQQEDAL 000000000000000000000000000000000000000000000 AQQ 012 >FERREDOXIN; SWP:NA; PDB:1CLF_ AYKIADSCVSCGACASECPVNAISQGDSIFVIDADTCIDCGNCAN 100000010001110000000000000000000000011111000 VCPVGAPVQE 0011000011 >PROTEIN (GAIP (G-ALPHA IN; SWP:NA; PDB:1CMZA SPGISGGGGGIPSPEEVQSWAQSFDKLMHSPAGRSVFRAFLRTEY -----------0000000000000000000000000000000000 SEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSL 000000000000000011000000000000000000111110000 DSRVREGINKKMQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTY 100000000000000000000000000000000000000000000 RALLPWVDSSSSLIHRD 0000------------- >TOXIN 2; SWP:NA; PDB:1CN2_ KEGYLVDKNTGCKYECLKLGDNDYCLRECKQQYGKGAGGYCYAFA 100000122211111110000000000000000111000000000 CWCTHLYEQAIVWPLPNKRCS 000000001100011222223 >PROTEIN (ACTIVATOR OF MET; SWP:NA; PDB:1CO4A MVVINGVKYACDSCIKSHKAAQCEHNDRPLKILKPRGRPPTT 000000000000000010000001001000000123578999 >PROTEIN (NEMATODE ANTICOA; SWP:NA; PDB:1COUA KATMQCGENEKYDSCGSKECDKKCKYDGVEEEDDEEPNVPCLVRV 855332321000111122221111224555667665545544333 CHQDCVCEEGFYRNKDDKCVSAEDCELDNMDFIYPGTRNP 3210000011001111100000000011234445789999 >PROTEIN (COPZ); SWP:NA; PDB:1CPZA AQEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFD 100000000011000000000000000000000001000000000 EANVQATEICQAINELGYQAEVI 00000000000000000000000 >CARDIOTOXIN II; SWP:P01442; PDB:1CRE LKCNKLVPLFYKTCPAGKNLCYKMFMVSNLTVPVKRGCIDVCPKN 000000000000000000000000000000000000000000000 SALVKYVCCNTDRCN 000000000000000 >TYPE IIA BACTERIOCIN LEUC; SWP:NA; PDB:1CW6A KYYGNGVHCTKSGCSVNWGEAFSAGVHRLANGGNGFW 0111000000110000000000000000000257899 >ENDOGLUCANASE C; SWP:NA; PDB:1CX1A ASLDSEVELLPHTSFAESLGPWSLYGTSEPVFADGRMCVDLPGGQ 642211000010000000000000000000000100000001111 GNPWDAGLVYNGVPVGEGESYVLSFTASATPDMPVRVLVGEGGGA 110110000000000000000000000000000000000001122 YRTAFEQGSAPLTGEPATREYAFTSNLTFPPDGDAPGQVAFHLGK 110000000000000000000000001000111111000000000 AGAYEFCISQVSLTTSAT 110000000000001136 >VCP-LIKE ATPASE; SWP:NA; PDB:1CZ4A MESNNGIILRVAEANSTDPGMSRVRLDESSRRLLDAEIGDVVEIE 000000000000000000000000000000000000000000000 KVRKTVGRVYRARPEDENKGIVRIDSVMRNNCGASIGDKVKVRKV 000000000000000000000000000000000000000000000 RTEIAKKVTLAPIIRKDQRLKFGEGIEEYVQRALIRRPMLEQDNI 000000000000000000000000000000000000000000000 SVPGLTLAGQTGLLFKVVKTLPSKVPVEIGEETKIEIREEPASEV 000000000000000000000000000000000000000000000 LEEGG 00000 >GLUCAGON-LIKE PEPTIDE-1-(; SWP:NA; PDB:1D0RA HAEGTFTSDVSSYLEGQAAKEFIAWLVKGR 666554321211111221221121233455 >HANATOXIN TYPE 1; SWP:NA; PDB:1D1HA ECRYLFGGCKTTSDCCKHLGCKFRDKYCAWDFTFS 10000000000000000000001210000013578 >INITIATION FACTOR 2; SWP:NA; PDB:1D1NA YEEKVIGQAEVRQTFKVSKVGTIAGCYVTDGKITRDSKVRLIRQG 321000000000000000000000000000000000000000000 IVVYEGEIDSLKRYKDDVREVAQGYECGLTIKNFNDIKEGDVIEA 000000000000001000000000000000000000000000000 YVMQEVARA 001110112 >HYPOTHETICAL 11.4 KD PROT; SWP:NA; PDB:1D1RA MSDSNSRLVYSTETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKGK ---------------------------421000000000123421 GVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRD 000000000010000000000000112111001110000000000 LLKSLLEAKGMKVKLAGGLEHHHHHH 00000000000000112235------ >TRNA SYNTHETASE; SWP:NA; PDB:1D2DA MVYDKIAAQGEVVRKLKAEKAPKAKVTEAVECLLSLKAEYKEKTG 200000000000000000000000000000000000000000000 KEYVPGLEHHHHHH 00000000023--- >HUMAN PHOSPHATASE HPTP1E; SWP:NA; PDB:1D5GA PKPGDIFEVELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGA -------5-6----------------------------------- AESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLE --------------------------------------------- KGQSPT ------ >DEFENSIN-LIKE PEPTIDE-2; SWP:NA; PDB:1D6BA IMFFEMQACWSHSGVCRDKSERNCKPMAWTYCENRNQKCCEY 653210000000000000000000000000000000000000 >RIBONUCLEASE P; SWP:NA; PDB:1D6TA MLLEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHFRL 543222111111000000000000000000000012222111000 GISVSKKLGNAVLRNKIKRAIRENFKVHKSHILAKDIIVIARQPA 100001111100000000000000000000000000000000000 KDMTTLQIQNSLEHVLKIAKVFNKKIK 010000000000000000000011223 >SGS1 RECQ HELICASE; SWP:NA; PDB:1D8BA ELNNLRMTYERLRELSLNLGNRMVPPVGNFMPDSILKKMAAILPM 321000000000000000000001111100000000000000000 NDSAFATLGTVEDKYRRRFKYFKATIADLSKKRSSE 000000001100000000000000000000001124 >GENERAL TRANSCRIPTION FAC; SWP:NA; PDB:1D8JA ALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLD 999753110000000000000000000000000000000000001 IGLKQKQWLMTEALVNNPKIEVIDGKYAFKPKYNVR 000000000000000000000010000000024579 >METHYL-CPG-BINDING PROTEI; SWP:NA; PDB:1D9NA MAEDWLDCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRS 531000000000000000001234555421000000000000000 KVELTRYLGPACDLTLFDFKQGILCYPAPK 000000000000000000000000012357 >CYCLIN-DEPENDENT KINASE 4; SWP:NA; PDB:1D9SA GSPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFG 999999975321100000000000000000000000000001100 RRPIQVMMMGSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGF 000000000000000000000000000000000000000000000 LDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 000000000000000000111100000000000000000000001 D 3 >CHLOROPLAST THIOREDOXIN M; SWP:NA; PDB:1DBYA MEAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIA 310000000000000000000000000000000000000000000 GEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETII 000111010000000000000000001000000001110000001 GAVPKATIVQTVEKYLN 11001000000000113 >YHHP PROTEIN; SWP:NA; PDB:1DCJA MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADD 310000000000000000000000000000000000000000000 PATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKGG 000000000000000000000000000000000002 >PROTEIN (BID); SWP:NA; PDB:1DDBA MDSEVSNGSGLGAKHITDLLVFGFLQSSGCTRQELEVLGRELPVQ 999999999986310000000000000111110000000135899 AYWEADLEDELQTDGSQASRSFNQGRIEPDSESQEEIIHNIARHL 999999999999999999999999999999999641000000000 AQIGDEMDHNIQPTLVRQLAAQFMNGSLSEEDKRNCLAKALDEVK 000000001110110000000000123334321000000000001 TAFPRDMENDKAMLIMTMLLAKKVASHAPSLLRDVFHTTVNFINQ 000011110000000000000000111111100000000000001 NLFSYVRNLVRNEMD 111112222134457 >RIBONUCLEASE ALPHA-SARCIN; SWP:NA; PDB:1DE3A AVTWTCLNDQKNPKTNKYETKRLLYNQNKAESNSHHAPLSDGKTG 100000000000000000000000000000000000000000000 SSYPHWFTNGYDGDGKLPKGRTPIKFGKSDCDRPPKHSKDGNGKT 000000000001111111211000000000000000000001111 DHYLLEFPTFPDGHDYKFDSKKPKENPGPARVIYTYPNKVFCGII 000000000000000000000000000000000000000000000 AHTKENQGELKLCSH 000000000000000 >DECORSIN; SWP:NA; PDB:1DEC_ APRLPQCQGDDQEKCLCNKDECPPGQCRFPRGDADPYCE 210000000000000000000000000000000000000 >DENDROTOXIN I; SWP:NA; PDB:1DEM_ QPLRKLCILHRNPGRCYQKIPAFYYNQKKKQCEGFTWSGCGGNSN 000000000000000000000000000000000000000000000 RFKTIEECRRTCIRK 000000000000000 >ICEBERG (PROTEASE INHIBIT; SWP:NA; PDB:1DGNA ADQLLRKKRRIFIHSVGAGTINALLDCLLEDEVISQEDMNKVRDE 000000000000000000000000000000000000000000000 NDTVMDKARVLIDLVTGKGPKSCCKFIKHLCEEDPQLASKMGLH 00000000000000000000000000000000000000000001 >ANTIFUNGAL PEPTIDE; SWP:NA; PDB:1DKCA AGCIKNGGRCNASAGPPYCCSSYCFQIAGQSYGVCKNR 11000000000122122100000000001100000001 >J-ATRACOTOXIN-HV1C; SWP:NA; PDB:1DL0A AICTGADRPCAACCPCCPGTSCKAESNGVSYCRKDEP 0000000000000000000000000000000000124 >NON-RIBOSOMAL PEPTIDE SYN; SWP:NA; PDB:1DNYA MPVTEAQYVAPTNAVESKLAEIWERVLGVSGIGILDNFFQIGGHS -------23111000000000000000000000000000111210 LKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVATRSHHHHH 00000000000000000000000000000000000000------- H - >CYTOCHROME B5; SWP:NA; PDB:1DO9A DKDVKYYTLEEIKKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEV 653110000000001011000000000000000000000000000 LREQAGGDATENFEDVGHSTDARELSKTFIIGELHPDDRSKLSKP 000000000000000000000000000000000001112245799 METL 9999 >TRAM PROTEIN; SWP:NA; PDB:1DP3A AKVQAYVSDEIVYKINKIVERRRAEGAKSTDVSFSSISTMLLELG 998655431100100000000000112223210000000000000 LRVYEAQMER 0111112347 >TACHYCITIN; SWP:NA; PDB:1DQCA YLAFRCGRYSPCLDDGPNVNLYSCCSFYNCHKCLARLENCPKGLH 753211101101111000000000000000010000000111100 YNAYLKVCDWPSKAGCTSVNKECHLWKT 0001000000010011111111222346 >BETA-SPECTRIN; SWP:NA; PDB:1DRO_ GSGTGAGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRIS 987654321000000001112444555542100000000010000 FYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYTKKKHVLRVK 000000000000100010000000000000011211100000000 LANGALFLLQAHDDTEMSQWVTSLKAQSDSTA 00100000000000000000000000001356 >DENDROASPIN; SWP:NA; PDB:1DRS_ RICYNHLGTKPPTTETCQEDSCYKNIWTFDNIIRRGCGCFTPRGD 000000011111000000000000001111100000000123444 MPGPYCCESDKCNL 31100000000011 >NUCLEIC ACID BINDING PROT; SWP:NA; PDB:1DSVA PPGLCPRCKKGYHWKSECKSKFDKDGNPLPP 4210000000010111100000000000012 >DENDROTOXIN K; SWP:NA; PDB:1DTK_ AAKYCKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRF 100000000000000000000000000000000000000000000 KTIEECRRTCVG 000000000001 >DNA POLYMERASE III; SWP:NA; PDB:1DU2A MLKNLAKLDQTEMDKVNVDLAAAGVAFKERYNMPVIAEAVEREQP 999975432100000000001111111111111111110000000 EHLRSWFRERLIAHRLASVNLSRLPYEPKLK 0000000001222333322234556899999 >HOMEOBOX PROTEIN PBX1; SWP:NA; PDB:1DU6A SSGHIEGRHMNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGI 999997542211000000000000000010000000000000000 TVSQVSNWFGNKRIRYKKN 0000000000001111246 >APO-D-ALANYL CARRIER PROT; SWP:NA; PDB:1DV5A ADEAIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLL 310000000000000000000000000000000000000000000 LELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQAQ 00000000000001000000000000000000000 >CYTOCHROME C553; SWP:NA; PDB:1DVH_ ADGAALYKSCIGCHGADGSKAAMGSAKPVKGQGAEELYKKMKGYA 200000000000000010000000000000010000000000000 DGSYGGERKAMMTNAVKKYSDEELKALADYMSKL 0000111000000000000000000000000001 >CYTOCHROME C551; SWP:NA; PDB:1DVVA EDPEVLAKNKGCMACHAIDTKMVGPAYKDVAAKYAGQAGAEAYLA 100000000000000000000000000000000000000000000 QRIKNGSQGVWGPIPMPPNAVSDDEAQTLAKWILSQK 0000000000000000000000000000000000002 >LINUM USITATISSINUM TRYPS; SWP:NA; PDB:1DWMA SRRCPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTK 321000000000000000000000000000000000000000000 DFRCDRVWVIVNDHGVVTSVPHIT 000000000000000000000000 >RUBREDOXIN; SWP:NA; PDB:1DX8A MEIDEGKYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPA 321110000000000000000000000000000000000000000 CRSPKNQFKSIKKVIAGFAENQKYG 0000000000001235679999999 >MODIFIER 1 PROTEIN; SWP:P83917; PDB:1DZ1A HMKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADL 975433211000000000000000001110000001011110000 VPAKEANVKCPQVVISFYEERLTWH 0000000000000000000000112 >CHORIONIC GONADOTROPIN; SWP:P01215; PDB:1DZ7A APDVQDCPECTLQENPFFSQPGAPILQCMGCCFSRAYPTPLRSKK 999976432112223443445443322112223579999999999 TMLVQKNVTSESTCCVAKSYNRVTVMGGFKVENHTACHCSTCYYH 999999997531000111122333344432222221100001356 KS 89 >PRU AV 1; SWP:O24248; PDB:1E09A GVFTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILE 000000000000000000000000000000000000000000000 GDGGPGTIKKITFGEGSQYGYVKHKIDSIDKENYSYSYTLIEGDA 000000000000012221000000000000000000000000000 LGDTLEKISYETKLVASPSGGSIIKSTSHYHTKGNVEIKEEHVKA 000000000000000000000000000000000110000000000 GKEKASNLFKLIETYLKGHPDAYN 000000000000000000000000 >SERINE/THREONINE-PROTEIN; SWP:P35465; PDB:1E0AB GSISLPSDFEHTIHVGFDAVTGEFTGMPEQWARLLQTSNITKSEQ 999999999889976422234221132222222245678999999 K 9 >HUMAN IMMUNODEFICIENCY VI; SWP:P04584; PDB:1E0EA FLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQ 000000000000000000000000000000000000000000000 KGEAIHGQVN 1--------- >MEMBRANE-BOUND LYTIC MURE; SWP:P0AEZ7; PDB:1E0GA DSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTL 000000000000000000000000000000000000000000000 FVK 001 >WWPROTOTYPE; SWP:NA; PDB:1E0MA SMGLPPGWDEYKTHNGKTYYYNHNTKTSTWTDPRMSS 4200000000000000000000000000000000023 >FERREDOXIN; SWP:NA; PDB:1E0ZA PTVEYLNYETLDDQGWDMDDDDLFEKAADAGLDGEDYGTMEVAEG 000000000000000001111000000000000000000000000 EYILEAAEAQGYDWPFSCRAGACANCASIVKEGEIDMDMQQILSD 000000000000000000000000000000000000001110000 EEVEEKDVRLTCIGSPAADEVKIVYNAKHLDYLQNRVI 00000000000000000000000000000001111224 >BETA-DEFENSIN 8; SWP:NA; PDB:1E4RA NEPVSCIRNGGICQYRCIGLRHKIGTCGSPFKCCK 54421001000000000111000000000000000 >BETA-DEFENSIN 1; SWP:NA; PDB:1E4SA DHYNCVSSGGQCLYSACPIFTKIQGTCYRGKAKCCK 211000000000000000000000000010100000 >BETA-DEFENSIN 7; SWP:NA; PDB:1E4TA NSKRACYREGGECLQRCIGLFHKIGTCNFRFKCCKFQ 6431000001000000011000000001110000012 >TRANSCRIPTIONAL REPRESSOR; SWP:NA; PDB:1E4UA MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRI 999998664211001001111111001000011100000000000 RTDENGLCPACRKPYPEDPAVYKPLSQEELQRI 000010001111000113567899999999999 >EXCINUCLEASE ABC SUBUNIT; SWP:NA; PDB:1E52A MHHHHHHLEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEA -------99987764321100000000000000000000011000 AQIRDQLHQLRELFIAAS 000000000000000101 >FIBRONECTIN; SWP:P02751; PDB:1E88A YGHCVTDSGVVYSVGMQWLKTQGNKQMLCTCLGNGVSCQETAVTQ 542222333221122111223334433222233432233454556 TYGGNSNGEPCVLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQ 566545665433343345655332234445776542113344344 DQKYSFCTDHTVLVQTRGGNSNGALCHFPFLYNNHNYTDCTSEGR 322234456644322222321111122332222222233334444 RDNMKWCGTTQNYDADQKFGFCPMA 5554322111221222211223456 >ILEAL LIPID BINDING PROTE; SWP:P10289; PDB:1EAL_ AFTGKYEIESEKNYDEFMKRLALPSDAIDKARNLKIISEVKQDGQ 100000000111000000000111111111111110000000110 NFTWSQQYPGGHSITNTFTIGKECDIETIGGKKFKATVQMEGGKV 000000001121110000000110001111111100000001100 VVNSPNYHHTAEIVDGKLVEVSTVGGVSYERVSKKLA 0001110000000011000000001100000000012 >ECTATOMIN; SWP:P49343; PDB:1ECIA GVIPKKIWETVCPTVEPWAKKCSGDIATYIKRECGKL ---------2-211----1122-2-232-21--1-3- >ECTATOMIN; SWP:P49344; PDB:1ECIB WSTIVKLTICPTLKSMAKKCEGSIATMIKKKCDK 3332112122112211113332023212123124 >CHITINASE A1; SWP:P20533; PDB:1ED7A AWQVNTAYTAGQLVTYNGKTYKCLQPHTSLAGWEPSNVPALWQLQ 000000000000000010000000000000000000000000000 >DNA-DIRECTED RNA POLYMERA; SWP:O26147; PDB:1EF4A MIPVRCLSCGKPVSAYFNEYQRRVADGEDPKDVLDDLGLKRYCCR 101100000000000000000000000000000000000100000 RMLISHVETW 0000000123 >MINI-PROINSULIN; SWP:P01308; PDB:1EFEA FVNQHLCGSHLVEALYLVCGERGFFYTPKTRRYPGDVKRGIVEQC 211000000000000000011222222223343433211110000 CTSICSLYQLENYCN 000000000000001 >GLUTAREDOXIN; SWP:P68688; PDB:1EGO_ MQTVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITK 100000011211100000000000011111000000000000011 EDLQQKAGKPVETVPQIFVDQQHIGGYTDFAAWVKENLDA 1100101122221110000110000000000000000013 >VASODILATOR-STIMULATED PH; SWP:P50552; PDB:1EGXA MSETVICSSRATVMLYDDGNKRWLPAGTGPQAFSRVQIYHNPTAN 210000000000000000000000000000100000000000000 SFRVVGRKMQPDQQVVINCAIVRGVKYNQATPNFHQWRDARQVWG 000000000000000000000000000000000000000000000 LNFGSKEDAAQFAAGMASALEALEG 0000000000000000000000001 >EPS15; SWP:P42566; PDB:1EH2_ PWAVKPEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDIL 100000000000000000000000000000000000000000000 GRVWELSDIDHDGMLDRDEFAVAMFLVYCALEKEPVPMSLPPALV 000000000000000000000000000000000000000000000 PPSKR 01112 >SCAFFOLDIN PROTEIN; SWP:Q45996; PDB:1EHXA MQDPTINPTSISAKAGSFADTKITLTPNGNTFNGISELQSSQYTK 110000000000000000000000000000000000000000000 GTNEVTLLASYLNTLPENTTKTLTFDFGVGTKNPKLTITVLPKDI 000000000000000000000000000000110000000001135 PGLE 7899 >HYPOTHETICAL PROTEIN MTH1; SWP:O27652; PDB:1EIJA MRQQLEMQKKQIMMQILTPEARSRLANLRLTRPDFVEQIELQLIQ 999754210000000000000000000000000000000000000 LAQMGRVRSKITDEQLKELLKRVAGKKREIKISRK 000121100000000000000000135-------- >RNA POLYMERASE SUBUNIT RP; SWP:O27122; PDB:1EIKA MKREILKHQLVPEHVILNESEAKRVLKELDAHPEQLPKIKTTDPV 999999763100000000000000000000000000000000000 AKAIGAKRGDIVKIIRKSPTAEEFVTYRLVQD 00000000000000000001000000000000 >MU-AGATOXIN-I; SWP:P11057; PDB:1EIT_ ECVPENGHCRDWYDECCEGFYCSCRQPPKCICRNNN 210000000133211001000000000000000001 >HYPOTHETICAL PROTEIN MTH5; SWP:NA; PDB:1EIWA VTAEIRLYITEGEVEDYRVFLERLEQSGLEWRPATPEDADAVIVL 431100000000100000000000001111000001100000000 AGLWGTRRDEILGAVDLARKSSKPIITVRPYGLENVPPELEAVSS 000010000000000000011100000000011111000000000 EVVGWNPHCIRDALEDALDVI 000000000000000001135 >WISKOTT-ALDRICH SYNDROME; SWP:NA; PDB:1EJ5A SGFKHVSHVGWDPQNGFDVNNLDPDLRSLFSRAGISEAQLTDAET 986442110000000000000000000000000000000000000 SKLIYDFIEDQGGLEAVRQEMRRQGGSGGSQSSEGLVGALMHVMQ 000000000000000000000000135653210000000000000 KRSRAIHSSDEGEDQAG 00011234689999999 >TRANSCRIPTION ELONGATION; SWP:NA; PDB:1ENWA GSHMPRNSKNDGVDTAIYHHKLRDQVLKALYDVLAKESEHPPQSI 999999997766554555554333212211122233444554432 LHTAKAIESEMNKVNNCDTNEAAYKARYRIIYSNVISKNNPDLKH 343233323333444445544443333223323434555555455 KIANGDITPEFLATCDAKDLAPAP 455455456777999999999999 >TRANSCRIPTION ELONGATION; SWP:NA; PDB:1EO0A MDSKEVLVHVKNLEKNKSNDAAVLEILHVLDKEFVPTEKLLRETK 000000000000000000000000000000000000000000000 VGVEVNKFKKSTNVEISKLVKKMISSWKDAIN 00000000000000000000000000000000 >HYPOTHETICAL PROTEIN MTH1; SWP:NA; PDB:1EO1A MKIAIASSGTDLGSEVSRFFGRAPYFMIVEMKKGNIESSEVIENP 000000121111111111111100000000011100000000012 SASASGGAGIRTAQIIANNGVKAVIASSPGPNAFEVLNELGIKIY 223333210000000000000000000000000000000000000 RATGTSVEENLKLFTEGNLEEIRSPGSGRGRRRR 0011100000000000001010124678999999 >APOLIPOPHORIN-III; SWP:NA; PDB:1EQ1A DAPAGGNAFEEMEKHAKEFQKTFSEQFNSLVNSKNTQDFNKALKD 987654311000000000000000000000111111110000000 GSDSVLQQLSAFSSSLQGAISDANGKAKEALEQARQNVEKTAEEL 000000000000000000000101100000000000000000000 RKAHPDVEKEANAFKDKLQAAVQTTVQESQKLAKEVASNMEETNK 000000000000000000000000000000000000011221110 KLAPKIKQAYDDFVKHAEEVQKKLHEAATKQ 0000000000000000000000000000012 >ORYZACYSTATIN-I; SWP:NA; PDB:1EQKA MSSDGGPVLGGVEPVGNENDLHLVDLARFAVTEHNKKANSLLEFE 999999986420000100000000000000000000000000000 KLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKEL 000000000000000000000000000000000000000000000 QEFKPVDASANA 000000123568 >PHEROMONE ER-2; SWP:NA; PDB:1ERD_ DPMTCEQAMASCEHTMCGYCQGPLYMTCIGITTDPECGLP 3100000000000000000000000000000000000112 >PHEROMONE ER-10; SWP:NA; PDB:1ERP_ DLCEQSALQCNEQGCHNFCSPEDKPGCLGMVWNPELCP 00000000000000000000000000000000000001 >PHEROMONE ER-11; SWP:NA; PDB:1ERY_ DECANAAAQCSITLCNLYCGPLIEICELTVMQNCEPPFS 000000000000000000000000000000000000001 >MINE; SWP:NA; PDB:1EV0A RSDAEPHYLPQLRKDILEVICKYVQIDPEMVTVQLEQKDGDISIL 000000000000000000000000000000000000000000000 ELNVTLPEAEELK 0000000011247 >RK-1 DEFENSIN; SWP:P81655; PDB:1EWSA MPCSCKKYCDPWEVIDGSCGLFNSKYICCREK 31000000000000000000000000000013 >TRANSCRIPTION FACTOR 1; SWP:P04445; PDB:1EXEA MNKTELIKAIAQDTGLTQVSVSKMLASFEKIITETVAKGDKVQLT 000000000000000000000000000000000000000000001 GFLNIKPVARQARKGFNPQTQEALEIAPSVGVSVKPGESLKKAAE 000000011223467899999987543211111111102000000 GLKYEDFAK 000001111 >DNAJ PROTEIN; SWP:P08622; PDB:1EXKA GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQG 999998753211001101000001111000000000100000112 FFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERS 1110111111111100000000111101011123 >ANTITERMINATION FACTOR NU; SWP:P0A780; PDB:1EY1A MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDV 766533200000000000000000000000000001111231110 LYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALY 000000000000000000000000110001111000000000000 ELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVLDKAAPVIR 000001111000000000000000001110000000000000001 PNKK 1122 >CHOLESTERYL ESTER TRANSFE; SWP:P34929; PDB:1EZEA APDVSSALDKLKEFGNTLEDKAWEVINRIKQSEFPAKT 64333110000000000000000000000001113456 >DIADENOSINE 5',5'''-P1,P4; SWP:O04841; PDB:1F3YA GPLGSMDSPPEGYRRNVGICLMNNDKKIFAASRLDIPDAWQMPQG 421110000111110000000000000000000000000000000 GIDEGEDPRNAAIRELREETGVTSAEVIAEVPYWLTYDFPPKVRE 000000000000000000000000000000000000001122111 KLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWS 211122222110000000000000000001012322110000000 WVTPEQLIDLTVEFKKPVYKEVLSVFAPHL 000000000000000000000000000000 >YEAST KILLER TOXIN-LIKE P; SWP:NA; PDB:1F53A IDHVPCRGGENFLKIWSHSGGQQSVDCYANRGRIDFGGWWVDKIS 000000000000000000000000000000000000000000000 TGNNDLIYYDANGDSVRVDRWHDITYPNRPPKVNSIEIL 000000000000000000000000000000000000000 >CALMODULIN; SWP:P06787; PDB:1F54A SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSE 421000000000000000000000000000000000000000000 AEVNDLMNEIDVDGNHQIEFSEFLALMSRQLK 00000000000010100000000000000113 >RHO-GEF VAV; SWP:P27870; PDB:1F5XA MKGDEIYEDLMRLESVPTPPKMTEYDKRCCCLREIQQTEEKYTDT 310000000112222234444423211110000000000000000 LGSIQQHFMKPLQRFLKPQDMETIFVNIEELFSVHTHFLKELKDA 000000000000000000000000000000000000000000000 LAGPGATTLYQVFIKYKERFLVYGRYCSQVESASKHLDQVATARE 001110000000000000000000000000000000000000000 DVQMKLEECSQRANNGRFTLRDLLMVPMQRVLKYHLLLQELVKHT 000000000000000000000000000000000000000000000 QDATEKENLRLALDAMRDLAQCVNEVKR 1110000000000000000000000124 >LOW-DENSITY LIPOPROTEIN R; SWP:P01130; PDB:1F5YA GSAVGDRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCL 876443335442112332211223223454433444323433333 SVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC 4443433212235533211224334565544554335544 >HISTONE ACETYLTRANSFERASE; SWP:Q92830; PDB:1F68A GDQLYTTLKNLLAQIKSHPSAWPFMEPVKKSEAPDYYEVIRFPID 310000000000000000000000000000110000000000000 LKTMTERLRSRYYVTRKLFVADLQRVIANCREYNPPDSEYCRCAS 000000000000000000000000000000000000100000000 ALEKFFYFKLKEG 0000000000114 >DNA TRANSPOSITION PROTEIN; SWP:P03763; PDB:1F6VA GSRIAKRTAINKTKKADVKAIADAWQINGEKELELLQQIAQKPGA 999865311100000000000000000000000000000000000 LRILNHSLRLAAMTAHGKGERVNEDYLRQAFRELDLDVDISTLLR 000000000000000010000000000000000000000001122 N 3 >PROTEIN (Blood Coagulatio; SWP:P08709; PDB:1F7EA SDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDGS 421110000000000000001100000000000000000001358 A 9 >CREB-BINDING PROTEIN; SWP:P45481; PDB:1F81A MSPQESRRLSIQRCIQSLVHACQCRNANCSLPSCQKMKRVVQHTK -00000000000000000000000000000000000000000000 GCKRKTNGGCPVCKQLIALCCYHAKHCQENKCPVPFCLNIKHK 0000100000000000000000000000000000000000000 >PROTEIN (FADD PROTEIN); SWP:Q61160; PDB:1FADA GSHMAAPPGEAYLQVAFDIVCDNVGRDWKRLARELKVSEAKMDGI ----00000000000000000000000000000000000000000 EEKYPRSLSERVRESLKVWKNAEKKNASVAGLVKALRTCRLNLVA 000000000000000000000000000000000000000000000 DLVEEAQES 000000012 >LARGE T ANTIGEN; SWP:P03074; PDB:1FAFA MDRVLSRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDK 321000000000000000000000000000000000000000000 GGSHALMQELNSLWGTFKTEVYNLRMNLGGTGFQ 0000000000000000000000000112478999 >RAF-1; SWP:P04049; PDB:1FAQ_ LTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKV 642100000001100000000000000000000000000001111 PTMCVD 222357 >IMMUNOGLOBULIN G BINDING; SWP:P19909; PDB:1FCLA TTFKLIINGKTLKGETTTEAVDAATAEKVLKQYINDNGIDGEWTY 100000000000000000000000000000000000000000000 DDATKTWTVTE 00000000000 >IMMUNOGLOBULIN G BINDING; SWP:P19909; PDB:1FD6A MTTFKLIINGKTLKGETTTEAVDAATAEKVFKQYANDNGIDGEWT 000000000000000000000000000000000000000000000 YDDATKTFTVTE 000000000000 >TRF2-INTERACTING TELOMERI; SWP:Q9NYB0; PDB:1FEXA GRIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHS 431100000000000000000101000010000000000111100 WQSLKDRYLKHLRG 00000000000013 >NODULATION PROTEIN F; SWP:P04685; PDB:1FH1A MADQLTLEIISAINKLVKAENGERTSVALGEITTDTELTSLGIDS ----0000000000000---------------------------- LGLADVLWDLEQLYGIKIEMNTADAWSNLNNIGDVVEAVRGLLTK 0000000000000-----------------00000000000---- EV -- >UNC-89; SWP:O01761; PDB:1FHOA MGDTGKLGRIIRHDAFQVWEGDEPPKLRYVFLFRNKIMFTEQDAS 999876431110000000012211100000001110000001124 TSPPSYTHYSSIRLDKYNIRQHTTDEDTIVLQPQEPGLPSFRIKP 544322321100011110100112211000011112211100001 KDFETSEYVRKAWLRDIAEEQEKYAAERD 12233221111101001111122335799 >EH DOMAIN PROTEIN REPS1; SWP:O54916; PDB:1FI6A WKITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILEL 211000000000000000011110000000000000010000000 SHIWELSDFDKDGALTLDEFCAAFHLVVARKNGYDLPEKLPESLM 000000000000000000000000000000011211222234443 PK 57 >NUCLEOLIN RBD1; SWP:P08199; PDB:1FJ7A GSHMLEDPVEGSESTTPFNLFIGNLNPNKSVAELKVAISELFAKN 999999999764310000000000000000000000000000000 DLAVVDVRTGTNRKFGYVDFESAEDLEKALELTGLKVFGNEIKLE 000000000011000000000000000000000000100000000 KPKGRDGTRGC 00135799999 >PEPTIDYL PROLYL CIS/TRANS; SWP:Q9Y237; PDB:1FJDA GSGPKGGGNAVKVRHILCEKHGKIMEAMEKLKSGMRFNEVAAQYS 999986530000000000000000000000000000000000000 EDKARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDKPVFTDPPVK 111121210000000111000000000100010111110000000 TKFGYHIIMVEGRK 01100000000001 >DEFENSIN MGD-1; SWP:P80571; PDB:1FJNA GFGCPNNYQCHRHCKSIPGRCGGYCGGWHRLRCTCYRCG 000000000000000000000000000000000000000 >FLI-1; SWP:Q01543; PDB:1FLIA PGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARR 643210100000000000000010001112210000000000000 WGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGI 000000011100000000000000000000111000000111221 AQALQPHP 22223446 >GENERAL CONTROL PROTEIN G; SWP:P03069; PDB:1FMHA EVAQLEKEVAQAEAENYQLEQEVAQLEHECG 00--0-0-0----0-00---0-0--0-0-12 >GENERAL CONTROL PROTEIN G; SWP:P03069; PDB:1FMHB EVQALKKRVQALKARNYAAKQKVQALRHKCG 0000000000000000000000000000012 >THIOREDOXIN; SWP:Q57755; PDB:1FO5A MSKVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMEN 310000000001123311000000000000000000000000111 PQKAMEYGIMAVPTIVINGDVEFIGAPTKEALVEAIKKRL 1111111111100000000000000000000000000013 >GLUTAREDOXIN 3; SWP:P0AC62; PDB:1FOVA ANVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIK 100000000100000000000000000000000111100000000 RSGRTTVPQIFIDAQHIGGYDDLYALDARGGLDPLLK 0000000000000000000000000000000000001 >CALCIUM-BINDING PROTEIN N; SWP:Q06389; PDB:1FPWA MGAKTSKLSKDDLTCLKQSTYFDRREIQQWHKGFLRDCPSGQLAR 997543111111111112111111100000000011111100000 EDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLS 000000001111100000000000000111110000000000000 TTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSM 011111101000000000000000000000000000000012346 VTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSII 666643211000000000001111111000000000001112211 GALNLYDGLI 2112135779 >P-SELECTIN; SWP:P16109; PDB:1FSB_ TASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRE 3211111100000000112110000000000000000012 >DISHEVELLED-1; SWP:P51141; PDB:1FSHA TSSVPGAPQLEEAPLTVKSDMSAIVRVMQLPDSGLEIRDRMWLKI -----------1100000000000000000000000000000000 TIANAVIGADVVDWLYTHVEGFKERREARKYASSMLKHGFLRHTV 000000000000000000000000000000000000000000010 NKITFSEQCYYVFGD 100000001000001 >THYROID TRANSCRIPTION FAC; SWP:P23441; PDB:1FTT_ MRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQ 999985421000000000000011110000000000000000000 VKIWFQNHRYKMKRQAKDKAAQQ 00000000000000135689999 >FUSHI TARAZU PROTEIN; SWP:P02835; PDB:1FTZ_ MDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSER 999997531000000000000000000000000000000000000 QIKIWFQNRRMKSKKDRTLDSSPEH 0000000000113234568999999 >U-SHAPED TRANSCRIPTIONAL; SWP:Q9VPQ6; PDB:1FU9A GSAAEVMKKYCSTCDISFNYVKTYLAHKQFYCKNKP 997653210000000000000000000000000136 >FIRST ZINC FINGER OF U-SH; SWP:Q9VPQ6; PDB:1FV5A GSLLKPARFMCLPCGIAFSSPSTLEAHQAYYCSHRI 111111100000000000000000000000000011 >ORYZAIN BETA CHAIN; SWP:P25777; PDB:1FWOA DHVCDDNFSCPAGSTCSSAFGFRNLSLVWGCSPVE 21122221111110001123565432111000113 >MULTIFUNCTIONAL AMINOACYL; SWP:P07814; PDB:1FYJA DSLVLYNRVAVQGDVVRELKAKKAPKEDVDAAVKQLLSLKAEYKE 100000000000000000000000000000000000000000000 KTGQEYKPGNPP 000111112223 >PHOSPHOGLYCERATE MUTASE; SWP:P36623; PDB:1FZTA MTTEAAPNLLVLTRHGESEWNKLNLFTGWKDPALSETGIKEAKLG 112211000000000000000000000000000000000000000 GERLKSRGYKFDIAFTSALQRAQKTCQIILEEVGEPNLETIKSEK 000000000000000000000000000000000000000000000 LNERYYGDLQGLNKDDARKKWGAEQVQIWRRSYDIAPPNGESLKD 000000000000000000000000000000000000000000000 TAERVLPYYKSTIVPHILKGEKVLIAAHGNSLRALIMDLEGLTGD 000000000000000000000000000000000000000000000 QIVKRELATGVPIVYHLDKDGKYVSKELIDN 0000000000000000000000000000001 >CDK-ACTIVATING KINASE ASS; SWP:P51948; PDB:1G25A MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGN 212110000000000001000000000000000000000000000 CPECGTPLRKSNFRVQLFED 00001001111000001235 >GRANULIN A; SWP:P28799; PDB:1G26A VVHCDMEVICPDGYTCCRLPSGAWGCCPFTQ 0000011000110000000111000000123 >PINCH PROTEIN; SWP:P48059; PDB:1G47A ISEFMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQC ----99875310000000000010000000110000000000000 FQQFPEGLFYEFEGRKYCEHDFQMLFAPCWIL 00000110000000000000000000235--- >FATTY ACID-BINDING PROTEI; SWP:P05413; PDB:1G5WA VDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKN 000000000000000000000000011000000000000000001 GDILTLKTHSTFKNTEISFKLGVEFDETTADDRKVKSIVTLDGGK 100000000011100000000000000000000000000000000 LVHLQKWDGQETTLVRELIDGKLILTLTHGTAVCTRTYEKEA 000000000000000000000000000011000000000001 >ANTIFUNGAL PROTEIN; SWP:Q9RCK8; PDB:1G6EA MINRTDCNENSYLEIHNNEGRDTLCFANAGTMPVAIYGVNWVESG 100000001100000000000000000000000000000000000 NNVVTLQFQRNLSDPRLETITLQKWGSWNPGHIHEILSIRIY 000000000000000000000000000000000000000000 >SHORT NEUROTOXIN 1; SWP:P82849; PDB:1G6MA LECHNQQSSQTPTTTGCSGGENNCYKKEWRDNRGYRTERGCGCPS 000001112221000001110000000000111000000000011 VKKGIGINCCTTDRCNN 22111110000000000 >COLD SHOCK PROTEIN TMCSP; SWP:O54310; PDB:1G6PA MRGKVKWFDSKKGYGFITKDEGGDVFVHWSAIEMEGFKTLKEGQV 000000000000000000000000000000011133311000000 VEFEIQEGKKGPQAAHVKVVE 000000111110000000000 >CLR4 PROTEIN; SWP:NA; PDB:1G6ZA ISSPKQEEYEVERIVDEKLDRNGAVKLYRIRWLNYSSRSDTWEPP --9987544211000000001000000000011223321000000 ENLSGCSAVLAEWKRRKRRLKGSNS 0000000000000000012356899 >ENDOPLASMIC RETICULUM PRO; SWP:P52555; PDB:1G7DA PGCLPAYDALAGQFIEASSREARQAILKQGQDGLSGVKETDKKWA 310000000000000000000000000000000000000000000 SQYLKIMGKILDQGEDFPASELARISKLIENKMSEGKKEELQRSL 000000000000000000000000000000011111100000000 NILTAFRKKGAEKEEL 0000001112122233 >ENDOPLASMIC RETICULUM PRO; SWP:P52555; PDB:1G7EA LHTKGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGEKQDEFKRLA 100110000000000000000000000000111111100000000 ENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYPVFYLFR 011111100000000000111000000000000001100000001 DGDFENPVPYSGAVKVGAIQRWLKGQGVYLGM 11111100000000000000000000101122 >GLUTAREDOXIN 2; SWP:P0AC59; PDB:1G7OA MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVGQ 000000000000000000000000000000000000000000000 KQVPILQKDDSRYMPESMDIVHYVDKLDGKPLLTGKRSPAIEEWL 000000000000000000000000000000000000000000000 RKVNGYANKLLLPRFAKSAFDEFSTPAARKYFVDKKEASAGNFAD 000000000000000000000000000000000111211110000 LLAHSDGLIKNISDDLRALDKLIVKPNAVNGELSEDDIQLFPLLR 000000000000000000000000000000000000000000000 NLTLVAGINWPSRVADYRDNMAKQTQINLLSSMAI 00000000000000000000000000000000000 >IMMUNOGLOBULIN E; SWP:P01854; PDB:1G84A SRDFTPPTVKILQSSSDGGGHFPPTIQLLCLVSGYTPGTINITWL 421111000000000134555430000000000000000000000 EDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQV 000111110000000000000000000000000000000000000 TYQGHTFEDSTKKSA 000000000000024 >H14; SWP:A2KD53; PDB:1G9EA QVQLQESGGGLVQAGGSLRLSCAASGRTGSTYDMGWFRQAPGKER 210000000000000000000000111111100000000010000 ESVAAINWDSARTYYASSVRGRFTISRDNAKKTVYLQMNSLKPED 000000011210000000000000000000100000000000000 TAVYTCGAGEGGTWDSWGQGTQVTVSS 000000000000000000000000012 >INTERLEUKIN-13; SWP:P35225; PDB:1GA3A GGPVPPSTALRELIEELVNITQNQKAPLCNGSMVWSINLTAGMYC 864321100000000000000011111111100000001110000 AALESLINVSGCSAIEKTQRMLSGFCPHKVSAGQFSSLHVRDTKI 000000000010000000000000001000112334443321100 EVAQFVKDLLLHLKKLFREGRFN 00000000000000000001357 >GB1-C3B4; SWP:P19909; PDB:1GB4_ MTTFKLIINGKTLKGEITIEAVDAAEAEKIFKQYANDNGIDGEWT 100000000001100000000000000000000000000000000 YDDATKTFTVTE 000000000000 >RIBOSOME RECYCLING FACTOR; SWP:O66928; PDB:1GE9A MIKELEDIFKEAEKDMKKAVEYYKNEIAGLRTSRASTALVEEIKV 421101111111111111111111111111111111111111111 EYYGSKVPIKQLGTISVPEHNQIVIQVWDQNAVPAIEKAIREELN 122222111121111111211111111111111111111011111 LNPTVQGNVIRVTLPPLTEERRRELVRLLHKITEEARVRVRNVRR 110001111111111111111111000000000000010011111 EAKEMIEELEGISEDEKKRALERLQKLTDKYIDEINKLMEAKEKE 111111221222221111101110111011001100111111112 IMSV 1122 >PROTEIN (CDC4P); SWP:Q09196; PDB:1GGWA STDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITE 999775456535545555543345543443345455567786577 IESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDAT 668876653345434544567766654333322332233446656 GMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVKDGMVNYHDFVQ 543222212222333443334443343344333332334344445 MILAN 55679 >TRANSLATION ELONGATION FA; SWP:O27734; PDB:1GH8A MGDVVATIKVMPESPDVDLEALKKEIQERIPEGTELHKIDEEPIA 100000000000000000000000000000000000000000000 FGLVALNVMVVVGDAEGGTEAAEESLSGIEGVSNIEVTDVRRLM 00000000000000000000000000000000000000000001 >8.3 KDA PROTEIN (GENE MTH; SWP:O27252; PDB:1GH9A MYIIFRCDCGRALYSREGAKTRKCVCGRTVNVKDRRIFGRADDFE 000000000000000000000000000000000000000000000 EASELVRKLQEEKYGSCHFTNPSKRE 00000000000124568999999999 >DNA-DAMAGE-INDUCIBLE PROT; SWP:P0ABR1; PDB:1GHHA MRIEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRYA 000000000000000000000000000000000000000000000 AANNLSVIGATKEDKQRISEILQETWESADDWFVSE 000000000000000000000000000000000000 >LAP2; SWP:P42166; PDB:1GJJA MPEFLEDPSVLTKDKLKSELVANNVTLPAGEQRKDVYVQLYLQHL 000000000000000000000000000000000000000000000 TARNRPPLPAGTNSKGPPDFSSDEEREPTPVLGSGAAAAGRSRAA 00000---------------------------------------- VGRKATKKTDKPRQEDKDDLDVTELTNEDLLDQLVKYGVNPGPIV --------------------0000000000000000000000000 GTTRKLYEKKLLKLREQGTESRSSTPLPTISSS 000000000000000000--------------- >IMMUNOGLOBULIN G BINDING; SWP:P19909; PDB:1GJSA MKAIFVLNAQHDEAVDANSLAEAKVLANRELDKYGVSDYYKNLIN 999999999999754210000000000000000000000000000 NAKTVEGVKALIDEILAALP 00000000000000000113 >PYRUVATE DEHYDROGENASE; SWP:Q9JZ09; PDB:1GJXA ALVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKATM 100000000011100000000000000000000000000001000 DVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAEGTA 000000000000000000000000000000000134 >COMPLEMENT RECEPTOR TYPE; SWP:P17927; PDB:1GKGA EAEAKSCKTPPDPVNGMVHVITDIQVGSRITYSCTTGHRLIGHSS 653221111121111111111111111100011112211111110 AECILSGNTAHWSTKPPICQRIPCGLPPTIANGDFISTNRENFHY 001112222110000111111111111122222222222222211 GSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQC 111111223345544432211111111122333322112122112 I 2 >COMPLEMENT RECEPTOR TYPE; SWP:P17927; PDB:1GKNA EAEAHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEYYGRPF 642211111111111001111211111111100000111111111 SITCLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHVITDIQVGSRI 001121211111111111111111111111100011111111100 TYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQRIP 00011111111110000011121110000001111122 >CYTOCHROME C551; SWP:P00122; PDB:1GKS_ DGESIYINGTAPTCSSCHDRGVAGAPELNAPEDWADRPSSVDELV 110000000000000000000000000000000000000000000 ESTLAGKGAMPAYDGRADREDLVKAIEYMLSTL 000000000000000000000000000000001 >TYROSINE-PROTEIN KINASE T; SWP:P24604; PDB:1GL5A GSEIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRARDKYG 311000000000111100000000000000011100000000111 SEGYIPSNYVTGKKSNNLDQYD 1000000000011234679999 >PROTEIN (SCAFFOLDING PROT; SWP:P26748; PDB:1GP8A ITGDVSAANKDAIRKQMDAAASKGDVETYRKLKAKLKGIR 7631100000000000000000000000000000001113 >GAMMA-1-P THIONIN; SWP:P20158; PDB:1GPS_ KICRRRSAGFKGPCMSNKNCAQVCQQEGWGGGNCDGPFRRCKCIR 100000011111111110000000000000000011111000000 QC 01 >GAMMA-1-H THIONIN; SWP:P20230; PDB:1GPT_ RICRRRSAGFKGPCVSNKNCAQVCMQEGWGGGNCDGPLRRCKCMR 100000011111111100000000000000000001221000000 RC 11 >MYOSIN BINDING PROTEIN C,; SWP:Q14896; PDB:1GXEA MHHHHHHSSRQEPPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGD ---------100000001111100000000000000000000000 PAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCET 000000000012356899999999999999999999999986433 EGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTV 431000000000000000010121000000000000000000000 KVID 0000 >COLICIN E8 IMMUNITY PROTE; SWP:P09881; PDB:1GXGA MELKNSISDYTETEFKKIIEDIINCEGDEKKQDDNLEHFISVTEH 000000000000000000000000000000000000000000000 PSGSDLIYYPEGNNDGSPEAVIKEIKEWRAANGKSGFKQG 0000000000000000000000000000000000000000 >PHOTOSYSTEM I REACTION CE; SWP:P12975; PDB:1GXIE ALNRGDKVRIKRTESYWYGDVGTVASVEKSGILYPVIVRFDRVNY 110100000001111000000000001011111000000011123 NGFSGSASGVNTNNFAENELELVQAAAK 3467654431000000000000000012 >SERINE PROTEASE INHIBITOR; SWP:Q9NQ38; PDB:1H0ZA ESGKATSYAELCNEYRKLVRNGKLACTRENDPIQGPDGKVHGNTC 975321000000000000011110011111110000110000000 SMCEVFFQAEEEEKKKKEGESRN 00000000000001123457899 >THO1 PROTEIN; SWP:P40040; PDB:1H1JS GSADYSSLTVVQLKDLLTKRNLSVGGLKNELVQRLIKDDEESKGE 42000000000000000000000000000000000000001356- SEVSPQ ------ >METALLOCARBOXYPEPTIDASE I; SWP:P01075; PDB:1H20A EQHADPICNKPCKTHDDCSGAWFCQACWNSARTCGPYVG 642100000000000000000000000000000000012 >HYPOTHETICAL 62.8 KDA PRO; SWP:O94312; PDB:1H3ZA GSERVNYKPGMRVLTKMSGFPWWPSMVVTESKMTSVARKSKPKRA -42100000000000000000000000000000000000000100 GTFYPVIFFPNKEYLWTGSDSLTPLTSEAISQFLEKPKPKTASLI 000000000000000000000000000000000000000000000 KAYKMAQSTPDLDSLSVPS 0000000000000000112 >POLCALCIN BET V 4; SWP:Q39419; PDB:1H4BA ADDHPQDKAERERIFKRFDANGDGKISAAELGEALKTLGSITPDE 210000000000000000000000000000000000000000000 VKHMMAEIDTDGDGFISFQEFTDFGRANRGLLKDVAKIF 000000000000000000000000000000000000000 >MYOTOXIN; SWP:P01475; PDB:1H5OA YKQCHKKGGHCFPKEKICLPPSSDFGKMDCRWRWKCCKKGSG 100000000000001111112210000001010000002466 >NUCLEAR AUTOANTIGEN SP100; SWP:P23497; PDB:1H5PA MDENINFKQSELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKWF 311101001000000000000000000000000000000010000 TPREFEIEGDRGASKNWKLSIRCGGYTLKVLMENKFLPEPPSTRK 000000000000010000000000000000000000011343445 KVTIK 55444 >CALPONIN ALPHA; SWP:P26932; PDB:1H67A MPQTERQLRVWIEGATGRRIGDNFMDGLKDGVILCELINKLQPGS 211211000000000000111110000000100000000000000 VQKVNDPVQNWHKLENIGNFLRAIKHYGVKPHDIFEANDLFENTN 011000011000000000000000000000000000000000000 HTQVQSTLIALASQAKTK 000000000000000011 >TRANSLATIONALLY CONTROLLE; SWP:Q10344; PDB:1H6QA MLLYKDVISGDELVSDAYDLKEVDDIVYEADCQMVTVKQGGDVDI 000000000000000000000000000000000000000000000 GANPSAEDAEENAEEGTETVNNLVYSFRLSPTSFDKKSYMSYIKG 000000000000000000000000000000000000000000000 YMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGES 000000000000000000000000000000000000000000000 MDPDAMVVLMNYREDGITPYMIFFKDGLVSEKF 000000000000000000000000000000000 >ALPHA-ACTININ 2, SKELETAL; SWP:P35609; PDB:1H8BA GAMADTDTAEQVIASFRILASDKPYILAEELRRELPPDQAQYCIK -------------------------------------776----- RMPAYSGPGSVPGALDYAAFSSALYGESDL 7----------------------------- >FAS-ASSOCIATED FACTOR 1; SWP:Q9UNN5; PDB:1H8CA NAEPVSKLRIRTPSGEFLERRFLASNKLQIVFDFVASKGFPWDEY 542000000000000000000000000000000000000011110 KLLSTFPRRDVTQLDPNKSLLEVKLFPQETLFLEAKE 0000000000000000000000000000000000012 >SYNAPTOBREVIN HOMOLOG 1; SWP:P36015; PDB:1H8MA MRIYYIGVFRSGGEKALELSEVKDLSQFGFFERSSVGQFMTFFAE 000000000000000000000000000000000000000000000 TVASRTGAGERQSIEEGNYIGHVYARSEGICGVLITDKQYPVRPA 000000000000000000000000000000000000000000000 YTLLNKILDEYLVAHPKEEWADVTETNDALKMKQLDTYISKYQDP 000000000000000000000000000000000000000000000 SQADA 00000 >Y-BOX BINDING PROTEIN; SWP:P67809; PDB:1H95A MKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNN 642000000000011011211000000100000000000001245 PRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPG 5555443211000000000022110000001124 >MACROPHAGE INFLAMMATORY P; SWP:O89093; PDB:1HA6A ASNYDCCLSYIQTPLPSRAIVGFTRQMADEACDINAIIFHTKKRK 642110000000000000000000000000000000000000000 SVCADPKQNWVKRAVNLLSLRVKKM 0000000000000000000000123 >PHEROMONE; SWP:P58547; PDB:1HA8A GECEQCFSDGGDCTTCFNNGTGPCANCLAGYPAGCSNSDCTAFLS 000000000000000000000000000000000000000000000 QCYGGC 000001 >REGULATORY PROTEIN GAL4; SWP:P04386; PDB:1HBWA TRAHLTEVESRLERLEQLFLLIFPREDLDMILKMDSLRDIEALLT 776543222222122223344335666533212222212221222 GLFVQDNVNKDA 223467999999 >HISACTOPHILIN; SWP:P13231; PDB:1HCD_ MGNRAFKSHHGHFLSAEGEAVKTHHGHHDHHTHFHVENHGGKVAL 000000000000000000000000000000000000000000000 KTHCGKYLSIGDHKQVYLSHHLHGDHSLFHLEHHGGKVSIKGHHH 000000000000000000000000000000000000000000000 HYISADHHGHVSTKEHHDHDTTFEEIII 0000000000000000000000000000 >PHEROMONE ER-22; SWP:P58548; PDB:1HD6A DICDIAIAQCSLTLCQDCENTPICELAVKGSCPPPWS 0000000000000000000000000000000001112 >HUMAN HSP40; SWP:P25685; PDB:1HDJ_ MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKF 532100000001111000000000000011112222222100000 KEIAEAYDVLSDPRKREIFDRYGEEGLKGSGC 00000000000011000000111222234689 >SERINE PROTEINASE INHIBIT; SWP:Q9NQ38; PDB:1HDLA KNEDQEMCHEFQAFMKNGKLFCPQDKKFFQSLDGIMFINKCATCK 755433111111111111111111111000000000000000000 MILEKEAKSQ 0000000134 >FACTOR H, 15TH AND 16TH C; SWP:P08603; PDB:1HFH EKIPCSQPPQIEHGTINSSRSSQESYAHGTKLSYTCEGGFRISEE 000000000000000000000000000000000000000000000 NETTCYMGKWSSPPQCEGLPCKSPPEISHGVVAHMSDSYQYGEEV 000000000000000000000000000000000000000000000 TYKCFEGFGIDGPAIAKCLGEKWSHPPSCI 000000000000000000000000000000 >CALRETICULIN; SWP:P18418; PDB:1HHNA SKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKK 999999999999987554321223333323222211110011111 PEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEI 122111111110000111111222222211123444567999999 DNPEYSPDANI 99999999999 >THYMOSIN BETA9; SWP:P21752; PDB:1HJ0A ADKPDLGEINSFDKAKLKKTETQEKNTLPTKETIEQEKQAK 00000000000000000000000000000000000000000 >HEAT-SHOCK TRANSCRIPTION; SWP:P22813; PDB:1HKS_ GSGVPAFLAKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKEL 000000000000000000000000000000000000000000000 LPLNYKHNNMASFIRQLNMYGFHKITSIDNGGLRFDRDEIEFSHP 000000000000000000000000000000000000000000000 FFKRNSPFLLDQIKRK 0000000000000000 >MICRONEME PROTEIN 5 PRECU; SWP:Q9U966; PDB:1HKYA DYKDDDDKVKLTCYQNGVSFTGGKAISEAKAASSQACQELCEKDA 999999999975321110000000000000000000000000000 KCRFFTLASGKCSLFADDAALRPTKSDGAVSGNKRCILLED 00000000000000001111000111100000122467999 >ALPHA-2A ADRENERGIC RECEP; SWP:P08913; PDB:1HLLA TSSIVHLCAISLDRYWSITQAIEYNLKRTPRR 00000000000000000000000000000000 >HONGOTOXIN 1; SWP:P59847; PDB:1HLYA TVIDVKCTSPKQCLPPCKAQFGIRAGAKCMNGKCKCYPH 000000000000000000000010000000000000001 >HIGH MOBILITY GROUP PROTE; SWP:P63159; PDB:1HME_ FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMW 000000000000000000000000000000000000000000000 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 00000000000000000000000000000000 >PROTEIN (SUBUNIT H); SWP:Q58443; PDB:1HMJA MKVTDHILVPKHEIVPKEEVEEILKRYNIKIQQLPKIYEDDPVIQ ---------000000000000000000000000000000000000 EIGAKEGDVVRVIRKSPTAGVSIAYRLVIKRII 00000000000000000000000000000000- >P19 ARF PROTEIN; SWP:NA; PDB:1HN3A GSHMGRRFLVTVRIQRAGRPLQERVFLVKFVRSRRPRTAS 9997533322222122222343222222233347899999 >TITYUSTOXIN K ALPHA; SWP:P46114; PDB:1HP2A VFINAKCRGSPECLPKCKEAIGKAAGKCMNGKCKCYP 1000100010000000000000000000000000001 >PHENOL HYDROXYLASE P2 PRO; SWP:P19731; PDB:1HQI_ MSSLVYIAFQDNDNARYVVEAIIQDNPHAVVQHHPAMIRIEAEKR 542211111111213222322322433211122221111111221 LEIRRETVEENLGRAWDVQEMLVDVITIGGNVDEDDDRFVLEWKN 111223222223212322222221232222222233321112479 >SYNTAXIN VAM3; SWP:Q12241; PDB:1HS7A TNQKTKELSNLIETFAEQSRVLEKECTKIGSKRDSKELRYKIETE 300000000000000000000000000000000000000000000 LIPNCTSVRDKIESNILIHQNGKLSADFKNLKTKYQSLQQSYNQR 000000000000000000000000000000000000000000000 KSLFPLK 0000001 >PHOSPHOLIPASE C-GAMMA (SH; SWP:P19174; PDB:1HSQ_ GSPTFKCAVKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWRGD 000000000000000000000000000000000000000000000 YGGKKQLWFPSNYVEEMVNPEGIHRD 00000000000000000000000000 >HU PROTEIN; SWP:P0A3H0; PDB:1HUEA MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLI 211110011011111110000000000011111111222111001 GFGNFEVRERAARKGRNPQTGEEMEIPASKVPAFKPGKALKDAVK 101111122222123579998642212222221111111111122 >BSTI; SWP:Q90248; PDB:1HX2A NFVCPPGQTFQTCASSCPKTCETRNKLVLCDKKCNQRCGCISGTV 210001000000001000000010011001110000000000000 LKSKDSSECVHPSKC 000000000000011 >TRIGGER FACTOR; SWP:P47480; PDB:1HXVA MRGSHHHHHHGSEKLAKTKSTMVDVSDKKLANGDIAIIDFTGIVD ----------------------------00000000000000000 NKKLASASAQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFP 000000000000000000000000000000000000000000000 SDYHVKELQSKPVTFEVVLKAIK 00000000000000000000000 >COCAINE AND AMPHETAMINE R; SWP:Q16568; PDB:1HY9A YGQVPMCDAGEQCAVRKGARIGKLCDCPRGTSCNSFLLKCL 42110001111000000110000000011111011111011 >AGOUTI RELATED PROTEIN; SWP:O00253; PDB:1HYKA CVRLHESCLGQQVPCCDPCATCYCRFFNAFCYCRKLGTAMNPCSR 000000000000000000000000000000000000001110011 T 2 >HEAD-TO-TAIL JOINING PROT; SWP:P68660; PDB:1HYWA MTRQEELAAARAALHDLMTGKRVATVQKDGRRVEFTATSVSDLKK 320000000000000000000000000000000000000000000 YIAELEVQTGMTQRRRGPAGFYV 0000000001124---------- >DUAL SPECIFICITY PROTEIN; SWP:Q16828; PDB:1HZMA MIDTLRPVPFASEMAISKTVAWLNEQLELGNERLLLMDCRPQELY 000000000000000000000000000000000000000000000 ESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRRC 000000000000000000000000000000000000000000000 GTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCRAFYLEGG 000000000000000000000000000000000000000000000 FSKFQAEFSLHCETNLDGS 0000000000000000000 >TRANSCRIPTION FACTOR SOX-; SWP:P35710; PDB:1I11A GSPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKA --6433221000000000000000110100010000000000000 MTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRT 010000000000000001112223456--------- >INTERLEUKIN 16; SWP:Q14005; PDB:1I16_ MPDLNSSTDSAASASAASDVSVESTAEATVCTVTLEKMSAGLGFS 999999999999999999999998742000000000011100000 LEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAM 000113443211000000001221221100000000000000000 QGLTRFEAWNIIKALPDGPVTIVIRRKSLQSKETTAAGDS 0000000000000000000000000012468999999999 >PRION-LIKE PROTEIN; SWP:Q9QUG3; PDB:1I17A RVAENRPGAFIKQGRKLDIDFGAEGNRYYAANYWQFPDGIYYEGC 753100000000000000000000000000000000000000000 SEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIK 000000000000000000000000000000000000000000000 EICSAKHCDFWLERGAA 00000000111123589 >PTU-1; SWP:P58606; PDB:1I26A AEKDCIAPGAPCFGTDKPCCNPRAWCSSYANKCL 4322111100000221000100000000000000 >PROTEIN KINASE BYR2; SWP:P28829; PDB:1I35A CILRFIACNGQTRAVQSRGDYQKTLAIALKKFSLEDASKFIVCVS 100000001100000011110000000000000000001000001 QSSRIKLITEEEFKQICFNSSSPERDRLIIVPKEKPCPSFEDLRR 221110000000000011133334311000001111121111122 SWEIE 32333 >APOLIPOPROTEIN CII; SWP:P02655; PDB:1I5JA TQQPQQDEMPSPTFLTQVKESLSSYWESAKTAAQNLYEKTYLPAV ------------998765554433432343345556777789999 DEKLRDLYSKSTAAMSTYTGIFTDQVLSVLKGEE 9999999999999999978755545567889998 >BAG-FAMILY MOLECULAR CHAP; SWP:Q60739; PDB:1I6ZA GSPEFMLIGEKSNPEEEVELKKLKDLEVSAEKIANHLQELNKELS 999999998754211100000000000000000000000000111 GIQQGFLAKELQAEALCKLDRKVKATIEQFMKILEEIDTMVLPEQ 111222111100000000000000000000000000011111221 FKDSRLKRKNLVKKVQVFLAECDTVEQYICQETERLQSTNLALAE 110000000000000000000000000000011111234689999 >GRANULIN-1; SWP:P81013; PDB:1I8XA VIHCDAATICPDGTTCSLSPYGVWYCSPFS 001000100001000000000000000001 >GLUCOSE PERMEASE; SWP:P69786; PDB:1IBA_ MAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGA 000000000000000000000000000000111100000000000 AGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNFG 000000000000011100000000000010011 >DNA FRAGMENTATION FACTOR; SWP:P19909; PDB:1IBXA MLQKPKSVKLRALRSPRKFGVAGRSCQEVLRKGCLRFQLPERGSR ---99--------3--------------------9---------- LCLYEDGTELTEDYFPSVPDNAELVLLTLGQAWQGHHHHHH 5-3-6654----3---------------------------- >CHIMERA OF IGG BINDING PR; SWP:P19909; PDB:1IBXB MQYKLILNGKTLKGETTTEAVDAATAEKVFKQYANDNGVDGEWTY --------------------------------------------- DDATKTFTVTESGEIRTLKPCLLRRNYSREQHGVAASCLEDLRSK --------------------------------------------- ACDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSNTKFVALAS --------------------------------------------- NEKWAYNNSD ---------- >NEURAL CELL ADHESION MOLE; SWP:P13590; PDB:1IE5A GKDIQVIVNVPPSVRARQSTMNATANLSQSVTLACDADGFPEPTM 755653221000000000000000000000000000000000000 TWTKDGEPIEQEDNEEKYSFNYDGSELIIKKVDKSDEAEYICIAE 000000000001100000000111000000000000000000000 NKAGEQDATIHLKVFAK 00000000000000001 >BRUC.D4.4; SWP:NA; PDB:1IEHA DVQLQASGGGLVQPGGSLRVSCAASGFTFSSYHMAWVRQAPGKGL 100000000000000000000000001010000000000011100 EWVSTINPGDGSTYYADSVKGRFTISRDNAKNTLYLQMNSLKSED 000000001200000000010000000011000000000000000 TAVYYCAKYSGGALDAWGQGTQVTVSSQSEQKLISEEDLNHHHHH 000000000111100010000000001357999999999999999 >POLYADENYLATE-BINDING PRO; SWP:P04147; PDB:1IFWA GPLGSPRNANDNNQFYQQKQRQALGEQLYKKVSAKTSNEEAAGKI 999999999997643310000000000000000000000000000 TGMILDLPPQEVFPLLESDELFEQHYKEASAAYESFKKEQEQQTE 000000000000000000000000000000000000000123346 QA 78 >MODULATOR RECOGNITION FAC; SWP:Q14865; PDB:1IG6A RADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKL 000000000000000000111001111111110000000000000 GGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYER 000000000000000000001121111000000000000000000 FIKGEEDKPLPPIKPRK 00011245899999999 >INSULIN-LIKE GROWTH FACTO; SWP:P01344; PDB:1IGL_ AYRPSETLCGGELVDTLQFVCGDRGFYFSRPASRVSRRSRGIVEE 653321111110000000000011001112346998754311001 CCFRSCDLALLETYCATPAKSE 0011111100000001234679 >CHIMERIC PEPTIDE GlyTM1bZ; SWP:P04692; PDB:1IHQA GAGSSSLEAVRRKIRSLQEQNYHLENEVARLKKLVGER 99642000000000000000000000000000000012 >PROTEIN (HLA-DR ANTIGENS; SWP:P04233; PDB:1IIEA YGNMTEDHVMHLLQNADPLKVYPPLKGSFPENLRHLKNTMETIDW 321000000000000000000000000000000000000000000 KVFESWMHHWLLFEMSRHSLEQKPTDAPPK 000000000000000000112234679999 >conserved hypothetical pr; SWP:NA; PDB:1IIOA GSHMKMGVKEDIRGQIIGALAGADFPINSPEELMAALPNGPDTTC ---422000000000000000000000000000000000010000 KSGDVELKASDAGQVLTADDFPFKSAEEVADTIVNKAGL 001000000000000000000000000000000000000 >conserved hypothetical pr; SWP:O26981; PDB:1ILOA MMKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIKEMDQILE 000000001100000000000000000000000000000000000 AGLTALPGLAVDGELKIMGRVASKEEIKKILS 00000000000000000000000000000001 >CYSTEINE RICH INTESTINAL; SWP:P63255; PDB:1IML_ PKCPKCDKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEH 100000000000000000000000000000000000001100000 EGKPYCNHPCYSAMFGPKGFGRGGAESHTFK 1100000000000113579999999999999 >INTESTINAL TOXIN 1; SWP:P25687; PDB:1IMT_ AVITGACERDLQCGKGTCCAVSLWIKSVRVCTPVGTSGEDCHPAS 764310000000101000000112111100000000000000000 HKIPFSGQRMHHTCPCAPNLACVQTSPKKFKCLSK 00000110000000000000000000000000002 >HYPOTHETICAL PROTEIN HI02; SWP:P71346; PDB:1IMUA MTLNITSKQMDITPAIREHLEERLAKLGKWQTQLISPHFVLNKVP 110000000000000000000000000000000000000000000 NGFSVEASIGTPLGNLLASATSDDMYKAINEVEEKLERQLNKLQH 000000000000000000000000000000000000000000000 KSESRRADERLKDSFEN 13568999999999999 >APOC-I; SWP:P02654; PDB:1IOJ_ TPDVSSALDKLKEFGNTLEDKARELISRIKQSELSAKMREWFSET 999999988865444322232244446656655543332222232 FQKVKEKLKIDS 232344567999 >Betacellulin; SWP:P35070; PDB:1IOXA RKGHFSRCPKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARCER 432100000000000000000000000000000000000000000 VDLFY 00134 >BEM1 PROTEIN; SWP:P29366; PDB:1IP9A GAMGSSTSGLKTTKIKFYYKDDIFALMLKGDTTYKELRSKIAPRI 999999974310000000000000000000000000000000000 DTDNFKLQTKLFDGSGEEIKTDSQVSNIIQAKLKISVHDI 0000000000000000000000000000000000000000 >RALBP1-INTERACTING PROTEI; SWP:Q8NFH8; PDB:1IQ3A GSLQDNSSYPDEPWRITEEQREYYVNQFRSLQPDPSSFISGSVAK 999999986644322221111000000000001011000100000 NFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHLIVARKN 000123211111000000000000000000000000000000011 GYPLPEGLPPTLQPEFIVTD 21233223567899999999 >HYPOTHETICAL PROTEIN MTH1; SWP:O27908; PDB:1IQOA LFIATLKGIFTLKDLPEEFRPFVDYKAGLEKKKLSDDDEIAIISI 211100000011121112111100000001111111110000001 KGTQSNHVLFLSSYNSVDEIRKELEEAGAKINHTTLKILEGHL 1222110000111111100000000000011211100000011 >tissue factor pathway inh; SWP:P10646; PDB:1IRHA EFHGPSWCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNE 432111000000011111100000000000000000001111000 NNFTSKQECLRACKKG 0000000000000012 >hMTH1; SWP:P36639; PDB:1IRYA MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETI 421000000000000000000000001000000000000000000 EDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDS 000000000000000000000000000000000000000000000 IQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHG 001000000000000000000000000000000000000000000 YFKFQGQDTILDYTLREVDTV 000000000000000000123 >ARR10-B; SWP:O49397; PDB:1IRZA TAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLT 754322211110000000000000000000000000000000000 RENVASHLQKFRVALKKVS 0000000000000111346 >INTERFERON ALPHA-2A; SWP:P01563; PDB:1ITF_ CDLPQTHSLGSRRTLMLLAQMRKISLFSCLKDRHDFGFPQEEFGN 222333221000000000000000000000000000000000000 QFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQ 001100000000000000000000000000000000000000000 QLNDLEACVIQGVGVTETPLMKEDSILAVRKYFQRITLYLKEKKY 000000000001111222111000000000000000000000000 SPCAWEVVRAEIMRSFSLSTNLQESLRSKE 000000000000000000000012235699 >centromere abp1 protein; SWP:NA; PDB:1IUFA GIHMGKIKRRAITEHEKRALRHYFFQLQNRSGQQDLIEWFREKFG 000000000000000000000000000000000000000000000 KDISQPSVSQILSSKYSYLDNTVEKPWDVKRNRPPKYPLLEAALF 000000000000000000000000000000000000000000000 EWQVQQGDDATLSGETIKRAAAILWHKIPEYQDQPVPNFSNGWLE 000000000000000000000000000000000000000000000 GFRKRHILH 000000000 >KIAA0730 protein; SWP:Q9NZJ4; PDB:1IURA MHHHHHHLVPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWH 999999864232100000000000000010000000000000000 PDKNPENHDIANEVFKHLQNEINRLEKQAFLDQNADRASRRTF 0111110000000000000000000000011245799999999 >cullin-3 homologue; SWP:Q9JLV5; PDB:1IUYA MAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNV 999999999999999976532110000000000000000000000 LVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTY 000000000000001000000000000000000000000000000 VA 00 >hypothetical protein; SWP:P83694; PDB:1IV0A MRVGALDVGEARIGLAVGEEGVPLASGRGYLVRKTLEEDVEALLD 000000001100000000012122221000000000000000000 FVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVEL 000000000000112344566655431000000000000000000 WDERFTTK 12357999 >lysozyme M; SWP:P08905; PDB:1IVMA KVYERCEFARTLKRNGMAGYYGVSLADWVCLAQHESNYNTRATNY 100000000000000000000000000000000000000000000 NRGDQSTDYGIFQINSRYWCNDGKTPRAVNACGINCSALLQDDIT 111110000000000000001122111110001000000000000 AAIQCAKRVVRDPQGIRAWVAWRAHCQNRDLSQYIRNCGV 0000000000000000000000000000000000000122 >hypothetical protein 1110; SWP:Q9D1H1; PDB:1IVZA GSSGSSGSSSSQHFNLNFTITNLPYSQDIAQPSTTKYQQTKRSIE 999987542100000000000000000000011000000000000 NALNQLFRNSSIKSYFSDCQVLAFRSVSNNNNHTGVDSLCNFSPL 000000000000000000000000001111000000000000000 ARRVDRVAIYEEFLRMTHNGTQLLNFTLDRKSVFVDSGPSSG 010000000000000000000000000000000000012467 >trypsin inhibitor; SWP:P16589; PDB:1IW4A AHMDCTEFNPLCRCNKMLGDLICAVIGDAKEEHRNMCALCCEHPG 311111211100001111100000000100000000000000012 GFEYSNGPCE 1100000111 >gastric H/K-ATPase; SWP:P19156; PDB:1IWCA MGKAENYELYQVELGPGPSGDMAAKMSKKKAGRG 8643333222222224466555433344456899 >FKBP; SWP:O52980; PDB:1IX5A MVDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPL 110111100000000011110000000000011111111111000 EFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAYGNRNEMLIQ 000011000000000000111100000000010010111111110 KIPRDAFKEADFEPEEGMVILAEGIPATITEVTDNEVTLDFNHEL 000000011121100110001111100000011110000001110 AGKDLVFTIKIIEVVE 1110000000000112 >Cylindromatosis tumour-su; SWP:Q9NQC7; PDB:1IXDA GSSGSSGLAMPPGNSHGLEVGSLAEVKENPPFYGVIRWIGQPPGL 999999763233211000000000000000000000000000000 NEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKSCRPD 000000000000000000000000000000000000000000000 SRFASLQPSGPSSG 00011245799999 >parkin; SWP:O60260; PDB:1IYFA GPLGSMIVFVRFNSSHGFPVEVDSDTSIFQLKEVVAKRQGVPADQ -----0000000011100000000000000000000000000000 LRVIFAGKELRNDWTVQNCDLDQQSIVHIVQRPWRK 000000000000000000000000000000112456 >Hypothetical protein (201; SWP:NA; PDB:1IYGA GSSGSSGMEAVLNELVSVEDLKNFERKFQSEQAAGSVSKSTQFEY 997531000000000000000000000000001100000000000 AWCLVRSKYNEDIRRGIVLLEELLPKGSKEEQRDYVFYLAVGNYR 000000000000000000000000000100000000000000000 LKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKKSGPSSG 0000000000000000000000000000000000001135589 >EL5; SWP:Q9LRB7; PDB:1IYMA AMDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHST 543210000000000000000000000000000000000000000 CPLCRLTVVV 0000000011 >DNA FRAGMENTATION FACTOR; SWP:O00273; PDB:1IYRA GSHMTGISRETSSDVALASHILTALREKQAPELSLSSQDLELVTK ----64345788754210000000000001101100000000000 EDPKALAVALNWDIKKTETVQEACERELALRLQQTQSLHSLRSIS 000000000000000000000000000000011234699999--- ASKASPPGDLQNPKRARQDPT --------------------- >Hypothetical Protein 1810; SWP:NA; PDB:1J0GA GSEGAATMSKVSFKITLTSDPRLPYKVLSVPESTPFTAVLKFAAE 987654310000000000111100000000000000000000000 EFKVPAATSAIITNDGIGINPAQTAGNVFLKHGSELRIIPRDRVG 000000000000001010000000000000000000000002445 SC 79 >Interleukin-18; SWP:Q14116; PDB:1J0SA YFGKLESKLSVIRNLNDQVLFIDQGNRPLFEDMTDSDCRDNAPRT 100000000000000000000000000000001233333332220 IFIISMYKDSQPRGMAVTISVKCEKISTLSCENKIISFKEMNPPD 000000000111100000000000000000000000000000000 NIKDTKSDIIFFQRSVPGHDNKMQFESSSYEGYFLACEKERDLFK 000000000000000001110000000000000000000000000 LILKKEDELGDRSIMFTVQNED 0000000000000000000001 >MOLT-INHIBITING HORMONE; SWP:P55847; PDB:1J0TA ASFIDNTCRGVMGNRDIYKKVVRVCEDCTNIFRLPGLDGMCRNRC 432100000000000000000000000000000000000000000 FYNEWFLICLKAANREDEIEKFRVWISILNAGQ 000000000000000000000000000000011 >Small Protein B; SWP:Q8RR57; PDB:1J1HA MAPVLENRRARHDYEILETYEAGIALKGTEVKSLRAGKVDFTGSF 321000000000000000000000000000000000000000000 ARFEDGELYLENLYIAPYEKGSYANVDPRRKRKLLLHKHELRRLL 000000000000000001345667542122110000000000000 GKVEQKGLTLVPLKIYFNERGYAKVLLGLARGKKAYEKRREDKKE 000010000000000000000000000000003------------ AVRRALEEL --------- >immature colon carcinoma; SWP:Q8R035; PDB:1J26A GSSGSSGEHAKQASSYIPLDRLSISYCRSSGPGGQNVNKVNSKAE 999999997543210000000000000012344433222110000 VRFHLASADWIEEPVRQKIALTHKNKINKAGELVLTSESSRYQFR 000000000000000000000000000000000000000000000 NLAECLQKIRDMIAEASGPSSG 0000000000000000012457 >Fusion of Rhombotin-2 and; SWP:P25801; PDB:1J2OA GSLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGR 431111122111111100001111000111111223334578998 RLYYKLGRKLCRRDYLRLGGSGGHMGSGGDVMVVGEPTLMGGEFG 642223322111111112323445656689999999987765555 DEDERLITRLENTQFDAANGIDDE 554321111011233568999989 >High mobility group prote; SWP:P17741; PDB:1J3CA MKKKDPNAPKRPPSAFFLFCSEYRPKIKSEHPGLSIGDTAKKLGE 643212110100000000000000000000000000000000000 MWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAK 0000000000000000000000000000001123 >AmpD protein; SWP:P82974; PDB:1J3GA MLLDEGWLAEARRVPSPHYDCRPDDENPSLLVVHNISLPPGEFGG 211121100000000010000000000000000000000000000 PWIDALFTGTIDPNAHPYFAGIAHLRVSAHCLIRRDGEIVQYVPF 000000000000000000000000000000000000000000000 DKRAWHAGVSSYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAA 000000000000000000000000000000000000000000000 VTNALITRYPAIANNMTGHCNIAPERKTDPGPSFDWARFRALVTP 000000000000000000000000000000000000000000001 SSHKEMT 1122356 >Cytochrome c; SWP:P99999; PDB:1J3SA GDVEKGKKIFIMKCSQCHTVEKGGKHKTGPNLHGLFGRKTGQAPG 110000000000000000000010000000000000000001011 YSYTAANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFVGIKKKEE 000000000000000000000000000000000001111111000 RADLIAYLKKATNE 00000000000001 >Intersectin 2; SWP:Q9NZM3; PDB:1J3TA GSSGSSGVENLKAQALCSWTAKKDNHLNFSKHDIITVLEQQENWW 999765421000000000000000000000000000000000000 FGEVHGGRGWFPKSYVKIIPGSESGPSSG 00000000000000000000123468999 >High mobility group prote; SWP:P17741; PDB:1J3XA MGKGDPNKPRGKMSSYAFFVQTSREEHKKKHPDSSVNFAEFSKKC 765667643221100000000000000111111110100000000 SERWKTMSAKEKSKFEDMAKSDKARYDREMKN 00000000000000000000000001112234 >Apo-Neocarzinostatin; SWP:P0A3R9; PDB:1J5HA HHHHHHLQGAAPTATVTPSSGLSDGTVVKVAGAGLQAGTAYDVGQ ---------421000000011100000000000000000000000 CAWVDTGVLACNPADFSSVTADANGSASTSLTVRRSFEGFLFDGT 001112100000000000000010000000000000000001221 RWGTVDCTTAACQVGLSDAAGNGPEGVAISFN 11110000000000000012211111000001 >BeKm-1 toxin; SWP:Q9BKB7; PDB:1J5JA RPTDIKCSESYQCFPVCKSRFGKTNGRCVNGFCDCF 000000000000000000000000000000000000 >peptidyl-prolyl cis-trans; SWP:NA; PDB:1J6YA MGSSHHHHHHSSGLVPRGSHMASRDQVKASHILIKHQGSRRKASW -------------------55432100000000000112233322 KDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATRVSDCS 222332222110000000000000000011110000000000100 SAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHII 000000000000111100000000000111100100000000000 KRTA 0012 >HYPOTHETICAL PROTEIN HI07; SWP:P44839; PDB:1J7HA MMTQIIHTEKAPAAIGPYVQAVDLGNLVLTSGQIPVNPATGEVPA 210100000000111110000000000000000000112111000 DIVAQARQSLENVKAIIEKAGLTAADIVKTTVFVKDLNDFAAVNA 000000000000000000000000000000000000000000000 EYERFFKENNHPNFPARSCVEVARLPKDVGLEIEAIAVRK 0000000000000000000000000000000000000001 >MATRIX METALLOPROTEINASE; SWP:P08253; PDB:1J7MA LAAHPPFASWMSTVGGNSGGAPCVFPFTFLGNKYESCTSAGRSDG --------4210000000110000000000000000000000110 KMWCATTANYDDDRKWGFCPDQGWISS 00000000000000000001124---- >Calcium Vector Protein; SWP:P04573; PDB:1J7QA AAPKARALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQ 999999963210000000000000133110000000000000011 TYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSKWVRQDD 00110000000000123433200000000000000001368 >Lymphotactin; SWP:P47992; PDB:1J8IA VGSEVSDKRTCVSLTTQRLPVSRIKTYTITEGSLRAVIFITKRGL 998755431000000000000000000000000000000000000 KVCADPQATWVRDVVRSMDRKSNTRNNMIQTKPTGTQQSTNTAVT 000000000000000000000011246689999999999999999 LTG 999 >FIBRONECTIN; SWP:P02751; PDB:1J8KA NIDRPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIHE 211101000000000000000001111110000000001110000 LFPAPDGEEDTAELQGLRPGSEYTVSVVALHDDMESQPLIGTQST 001111111000000001110000000000111000000000000 AIPA 0123 >TERMINASE SMALL SUBUNIT; SWP:P03707; PDB:1J9IA MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAA 000000000000000000000000000000011122110000000 VIKWYAERDAEIENEKLRREVEE 00000000011123356679999 >DNA POLYMERASE BETA-LIKE; SWP:P42494; PDB:1JAJA MLTLIQGKKIVNHLRSRLAFEYNGQLIKILSKNIVAVGSLRREEK 100000000000000000000000000000000000000000000 MLNDVDLLIIVPEKKLLKHVLPNIRIKGLSFSVKVCGERKCVLFI 000000000000000000000000000000000000000000000 EWEKKTYQLDLFTALAEEKPYAIFHFTGPVSYLIRIRAALKKKNY 000000000000000000000000000000000000000000000 KLNQYGLFKNQTLVPLKITTEKELIKELGFTYRIPKKRL 000000000000000000000000000000000000001 >UBIQUITIN-CONJUGATING ENZ; SWP:P63146; PDB:1JASA MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEG 210000000000000000000000000000000000000000000 TPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLD 000000000000000000000000000000000000000000000 ILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKR 000000000000000000000000000000000000000000000 EYEKRVSAIVEQSWNDS 00000000000000124 >PROTEIN (GUANYLATE CYCLAS; SWP:P51177; PDB:1JBAA MGQQFSWEEAEENGAVGAADAAQLQEWYKKFLEECPSGTLFMHEF -99752233344443222111111111111111212110000000 KRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLR 001111222110000000000001111110000000000001111 GTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEV 221110000000000111110000000000000000011122333 EAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWV 335654321110000000000111121110001101111111211 MKMLQMDLNPSSWISQQRRKSAMF 1100112245-------------- >cochlin; SWP:O43405; PDB:1JBIA TAPIAITCFTRGLDIRKEKADVLCPGGCPLEEFSVYGNIVYASVS 210000000000000000000000000001100000000000000 SICGAAVHRGVISNSGGPVRVYSLPGRENYSSVDANGIQSQMLSR 000000000000000000000000000000000000000000000 WSASFTVTLE 0000000001 >CD3 Epsilon and gamma Ect; SWP:NA; PDB:1JBJA DDAENIEYKVSISGTSVELTCPLDSDENLKWEKNGQELPQKHDKH 643211100000011000000101011100000111001000000 LVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAA 000000011221000001111111100000000013578899999 KKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGLTDKT 999999999999999998653210000011111000000111110 IKWLKDGSIISPLNATKNTWNLGNNAKDPRGTYQCQGAKETSNPL 000000000000110000000001111110000000111100000 QVYYRM 000123 >VENOM BASIC PROTEASE INHI; SWP:P25660; PDB:1JC6A KNRPTFCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNAN 432100000000011111000000000000000000001100000 NFKTIDECQRTCAAKYGRSS 00000000000012457999 >conserved protein MTH1692; SWP:O27727; PDB:1JCUA MLIRKITRKNPSPDVLEEAISVMEGGGIVIYPTDTIYGLGVNALD 999865434321110000000000000000000000000000000 EDAVRRLFRVKGRSPHKPVSICVSCVDEIPRFSRPSGDAMELMER 000000000001111100000000000000000000000000000 ILPGPYTVVLERNELIPDVITGGSSRVGIRVPDDEICRRIAARFP 000000000000000110000010000000000000000000000 VTATSANISGKPPSPRLEEIVRDLDAVDLVLDAGDCLDMEPSTVI 000000122110000000000000000000000111111110000 DLTVNPPRVLRRGKGPLDPVLLRGAGDV 0000000000012234456789999999 >HYPOTHETICAL PROTEIN TM09; SWP:Q9X078; PDB:1JDQA GSSHHHHHHSSGLVPRGSHMAKYQVTKTLDVRGEVCPVPDVETKR 999999999999999998764321000000011112111000000 ALQNMKPGEILEVWIDYPMSKERIPETVKKLGHEVLEIEEVGPSE 000000000000000010000000000000000000000000000 WKIYIKVK 00000000 >HYPOTHETICAL 8.6 KDA PROT; SWP:P0AA31; PDB:1JE3A MGSSHHHHHHSSGLVPRGSHMKNIVPDYRLDMVGEPCPYPAVATL 999999999999999999998643211000000012231000000 EAMPQLKKGEILEVVSDCPQSINNIPLDARNHGYTVLDIQQDGPT 000000000000000000111110000000000000000000100 IRYLIQK 0000000 >EMERIN; SWP:P50402; PDB:1JEIA DNYADLSDTELTTLLRRYNIPHGPVVGSTRRLYEKKIFEYETQRR 100011000000000000000000001100000000000001112 RLSPPSSS 33357899 >CALCIUM-BINDING PROTEIN; SWP:P38505; PDB:1JFJA MAEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSI 998986898899986555566457667998887667656765887 DADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDG 899998644454466568887776556545645776899999999 KLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYITLEEFLEFSL 85444545778999999976886799999997777688568879 >CANDOXIN; SWP:P81783; PDB:1JGKA MKCKICNFDTCRAGELKVCASGEKYCFKESWREARGTRIERGCAA 100001122112110000111110000000001110000000000 TCPKGSVYGLYVLCCTTDDCN 111112211000000111112 >TYROSYL-TRNA SYNTHETASE; SWP:P00952; PDB:1JH3A ALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLVSAGISP 544321111000000000000000000000000000000000000 SKRQAREDIQNGAIYVNGERLQDVGAILTAEHRLEGRFTVIRRGK 000000000000000000000000000000000000000000000 KKYYLIRYALEHHHHHH 000000000-------- >dissimilatory siroheme-su; SWP:Q8ZUX1; PDB:1JI8A MPVKCPGEYQVDGKKVILDEDCFMQNPEDWDEKVAEWLARELEGI 421100000001100000011001000110000000000000000 QKMTEEHWKLVKYLREYWETFGTCPPIKMVTKETGFSLEKIYQLF 000000000000000000111111111111111111000000000 PSGPAHGACKVAGAPKPTGCV 111000000000012235679 >DEFENSE-RELATED PEPTIDE 1; SWP:P81929; PDB:1JKZA KTCEHLADTYRGVCFTNASCDDHCKNKAHLISGTCHNWKCFCTQN 100000000011000000000000000000000000100000000 C 0 >BRCA1-ASSOCIATED RING DOM; SWP:Q99728; PDB:1JM7B MEPDGRGAWAHSRAALDRLEKLLRCSRCTNILREPVCLGGCEHIF 999999985312355332233576699878999999999999999 CSNCVSDCIGTGCPVCYTPAWIQDLKINRQLDSMIQLCSKLRNLL 999999999999999999999998887645434------------ HDNELSDLKEDKPRKSLFNDAGNKKGK --------------------------- >viscotoxin A2; SWP:P32880; PDB:1JMNA KSCCPNTTGRNIYNTCRFGGGSRQVCASLSGCKIISASTCPSDYP 100000000000000000000000000000000001111111100 K 0 >viscotoxin B; SWP:P08943; PDB:1JMPA KSCCPNTTGRNIYNTCRLGGGSRERCASLSGCKIISASTCPSDYP 210000000000000000000000000000000112222122212 K 2 >PEPTIDYL-PROLYL CIS-TRANS; SWP:P0A9L5; PDB:1JNSA AKTAAALHILVKEEKLALDLLEQIKNGADFGKLAKKHSICPSGKR 210000000000000000000000000000000000000000000 GGDLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFGYHIIKVLY 000000012212100000000001000000000000000000000 RN 12 >PROTEIN (ENVZ_ECOLI); SWP:P0AEJ4; PDB:1JOYA MAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMSEQDGYLA 976543221111100000000000000000000000000000000 ESINKDIEECNAIIEQFIDYLR 0000000000000000000112 >METHANE MONOOXYGENASE COM; SWP:P22868; PDB:1JQ4A MQRVHTITAVTEDGESLRFECRSDEDVITAALRQNIFLMSSCREG 100000000000000000000000000000000000000001100 GCATCKALCSEGDYDLKGCSVQALPPEEEEEGLVLLCRTYPKTDL 000100000000000000000000000000000000100000000 EIELPYTH 00000001 >10 KDA Anti-Sigma Factor; SWP:P32267; PDB:1JR5A MNKNIDTVREIITVASILIKFSREDIVENRANFIAFLNEIGVTHE 000000000000000000000000000000000000000000000 GRKLNQNSFRKIVSELTQEDKKTLIDEFNEGFEGVYRYLEMYTNK 000000000000000000000000000000000000000000001 >Helicase NS3; SWP:P27958; PDB:1JR6A GSHMGSVTVPHPNIEEVALSTTGEIPFYGKAIPLEVIKGGRHLIF ----21100001000000000000000000000000000000000 CHSKKKCDELAAKLVALGINAVAYYRGLDVSVIPTNGDVVVVATD 000000000000000000000000000000000011000000000 ALMTGFTGDFDSVIDCNTSDGKPQDAVSRTQRRGRTGRGKPGIYR 001111000000000000011000000000000000000000000 FVAPGER 0012245 >Exendin-4; SWP:P26349; PDB:1JRJA HGEGTFTSDLSKQMEEEAVRLFIEWLKNGGPSSGAPPPS 875421100000000000000000000000111111111 >CONSERVED HYPOTHETICAL PR; SWP:O26734; PDB:1JRMA VITMDCLREVGDDLLVNIEVSPASGKFGIPSYNEWRKRIEVKIHS 000000000000000000000000000000000000000000000 PPQKGKANREIIKEFSETFGRDVEIVSGQKSRQKTIRIQGMGRDL 000000000000000000000000000000000000000000000 FLKLVSEKFGLEIP 00000000000000 >PROBABLE TRANSLATION INIT; SWP:Q57887; PDB:1JT8A MAEQQQEQQIRVRIPRKEENEILGIIEQMLGASRVRVRCLDGKTR 999999865433334433322110111222221111111222110 LGRIPGRLKNRIWVREGDVVIVKPWEVQGDQKCDIIWRYTKTQVE 001111111111222211001111111111100100001344322 WLKRKGYLDELL 211112234556 >Leginsulin; SWP:Q39837; PDB:1JU8A ADCNGACSPFEVPPCRSRDCRCVPIGLFVGFCIHPTG 0000000000000000000000000000000000000 >HEMOLYSIN EXPRESSION MODU; SWP:P0ACE3; PDB:1JW2A MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYS 333221000000000000000000000000000000000000000 AADHRLAELTMNKLYDKIPSSVWKFIR 000000000001001110111001112 >Conserved Hypothetical Pr; SWP:O27635; PDB:1JW3A MKGFEFFDVTADAGFWAYGHDLEEVFENAALAMFEVMTDTSLVEA 210000001111000000000000000000000000111121110 AEERRVEITSEDRVSLLYDWLDELLFIHDTEFILFSKFKVKIDEK 000000000000000000000000000000111110000000011 DDGLHLTGTAMGEEIKEGHERRDEVKAVTFHMMEILDEDGLIKAR 220000000000001112111111111111100000000000000 VILDL 00011 >lipocalin Q83; SWP:Q9I9P7; PDB:1JZUA MTVPDRSEIAGKWYVVALASNTEFFLREKDKMKMAMARISFLGED 753211111000000000000112322233211000000000110 ELKVSYAVPKPNGCRKWETTFKKTSDDGEVYYSEEAKKKVEVLDT 000000001244311000000000011110000012110000000 DYKSYAVIYATRVKDGRTLHMMRLYSRSPEVSPAATAIFRKLAGE 111000000000011111000000000001000000000000111 RNYTDEMVAMLPRQEECTVDEV 2221111000123443211235 >gpFII; SWP:P03714; PDB:1K0HA MADFDNLFDAAIARADETIRGYMGTSATITSGEQSGAVIRGVFDD 999999999999999998753110000000000000000000000 PENISYAGQGVRVEGSSPSLFVRTDEVRQLRRGDTLTIGEENFWV 011355555655553100000000000000000000000000000 DRVSPDDGGSCHLWLGRGVPPAVNRRR 001123332101000000135667999 >CHEMOTAXIS PROTEIN CHEW; SWP:Q56311; PDB:1K0SA MKTLADALKEFEVLSFEIDEQALAFDVDNIEMVIEKSDITPVPKS 987753210000000000000000000000000001111011112 RHFVEGVINLRGRIIPVVNLAKILGISFDEQKMKSIIVARTKDVE 221000001111000000000000000000000000000000000 VGFLVDRVLGVLRITENQLDLTNVSDKFGKKSKGLVKTDGRLIIY 000000000000000001122332211011101000001100000 LDIDKIIEEITVKEGV 0000000000000134 >CopZ; SWP:O32221; PDB:1K0VA MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVS 100000000000000000000000000000000000000000000 FDADKVSVKDIADAIEDQGYDVAKIEGR 0000000000000000000000000111 >MafG; SWP:O54790; PDB:1K1VA LTDEELVTMSVRELNQHLRGLSKEEIIQLKQRRRTLKNRGY 00000000000000000000000000000000000001111 >S-100 protein, alpha chai; SWP:P35467; PDB:1K2HA GSELETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFL 200000000000000000001210000000000000000000000 DVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALTVACNNFFW 000000000000000000000000000000000000000001111 ENS 234 >Epiregulin; SWP:O14944; PDB:1K36A VSITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRCEHFF 210000121111000000000000000000000100111000111 L 1 >Xylanase; SWP:P96988; PDB:1K42A MLVANINGGFESTPAGVVTDLAEGVEGWDLNVGSSVTNPPVFEVL 110000000000000000000000000000000000000000000 ETSDAPEGNKVLAVTVNGVGNNPWDIEATAFPVNVRPGVTYTYTI 000000000000000000000000000000000000000000000 WARAEQDGAVVSFTVGNQSFQEYGRLHEQQITTEWQPFTFEFTVS 000000000000000000010000000000000000000000000 DQETVIRAPIHFGYAANVGNTIYIDGLAIASQP 000000000000000000000000000000113 >PROBABLE TRANSLATION INIT; SWP:Q57562; PDB:1K81A VICRECGKPDTKIIKEGRVHLLKCMACGAIRPIRMI 532321211000000000000000000000000124 >CHITINASE A1; SWP:P20533; PDB:1K85A HMAPTAPTNLASTAQTTSSITLSWTASTDNVGVTGYDVYNGTALA 310000000000000000000000000011000000000010000 TTVTGTTATISGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 0000000000000000000000000000000000000000000 >PROBABLE TRANSLATION INIT; SWP:Q57562; PDB:1K8BA EILIEGNRTIIRNFRELAKAVNRDEEFFAKYLLKETGSAGNLEGG 000000000000000000000000000000000000000000000 RLILQRR 0000002 >Small protein B; SWP:O66640; PDB:1K8HA GKSDKIIPIAENKEAKAKYDILETYEAGIVLKGSEVKSLREKGTV 764210000000000011000000000001111100000001122 SFKDSFVRIENGEAWLYNLYIAPYKHATIENHDPLRKRKLLLHKR 321000000000000000111112333444321111000000000 EIMRLYGKVQEKGYTIIPLKLYWKNNKVKVLIALAKGKKLYDR 0000000000000000000000000000000000001245668 >Upstream binding factor 1; SWP:P17480; PDB:1K99A MKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKIL 999986556532110000000000000000000110100000000 SKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAK 000000000000000000000000001122223456899999999 KLEHHHHHH 9-------- >PHOSPHOCARRIER PROTEIN HP; SWP:P0A0E3; PDB:1KA5A MEQNSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLK 000000000000000000000000000000000000000000000 SIMGVMSLGVGKDAEITIYADGSDESDAIQAISDVLSKEGLTK 0000000000000000000000000000000000000000000 >Excinuclease ABC subunit; SWP:P0A8G0; PDB:1KFTA MGSSHHHHHHSSGLVPRGSHMNTSSLETIEGVGPKRRQMLLKYMG ----------------------99666433321100000000000 GLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH 000000000000000000010000000000012 >Necrosis Inducing Protein; SWP:Q02039; PDB:1KG1A DRCRYTLCCDGALKAVSACLHESESCLVPGDCCRGKSRLTLCSYG 310000000001110000000010000000000000000000001 EGGNGFQCPTGYRQC 233311100000000 >Beta-defensin 3; SWP:P81534; PDB:1KJ6A GIINTLQKYYCRVRGGRCAVLSCLPKEEQIGKCSTRGRKCCRRKK 974210000000000000000000000000000111000000012 >integrase; SWP:P03700; PDB:1KJKA MGRRRSHERRDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAI ----------10000000000000000001100000000000000 TEAIQANIELFSGHKHKPL 00000000000124----- >ribosome-binding factor A; SWP:P0A7G2; PDB:1KKGA MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSR 210000000000000000000000000000000000000000000 DLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLR 000000000000000000000000000000000000000000000 IVPELTFFYDNSLVEGMR 000000000000000001 >Transcription regulatory; SWP:P09547; PDB:1KKXA MRGSGSHHHHHHGSNNKQYELFMKSLIENCKKRNMPLQSIPEIGN --------------2111000000000000000001110000111 RKINLFYLYMLVQKFGGADQVTRTQQWSMVAQRLQISDYQQLESI 110000000000000000000000000000000000000000000 YFRILLPYERHMISQEGIKETQAKRILQPSLIS 00000000000112346888799999------- >TRANSFORMING GROWTH FACTO; SWP:P01137; PDB:1KLAA ALDTNYCFSSTEKNCCVRQLYIDFRKDLGWKWIHEPKGYHANFCL 000000011211100000000000000000000000000000000 GPCPYIWSLDTQYSKVLALYNQHNPGASAAPCCVPQALEPLPIVY 000011010100000000000011110000000000000000000 YVGRKPKVEQLSNMIVRSCKCS 0000000000000000000000 >ZINC FINGER Y-CHROMOSOMAL; SWP:P08048; PDB:1KLRA KTYQCQYCEFRSADSSNLKTHIKTKHSKEK 210000000000010000000000001357 >Vacuolar morphogenesis pr; SWP:P32912; PDB:1KMDA KMSEKLRIKVDDVKINPKYVLYGVSTPNKRLYKRYSEFWKLKTRL 432100000000000000000000000000000000000000000 ERDVGSTIPYDFPEKPGVLDRRWQRRYDDPEMIDERRIGLERFLN 000000000000011223222221100000000000000000000 ELYNDRFDSRWRDTKIAQDFLQLSKPN 000001000000000000000001245 >vascular endothelial grow; SWP:P15692; PDB:1KMXA ARQENPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELNE 976431101112221100000110000000000000000000000 RTCRCDKPRR 0000001135 >Prohormone Convertase 1; SWP:P63239; PDB:1KN6A MHHHHHHKRQFVNEWAAEIPGGQEAASAIAEELGYDLLGQIGSLE ----------21100000001000000000000000000111110 NHYLFKHKSHPRRSRRSALHITKRLSDDDRVTWAEQQYEKERSKR 00000001222212222100000000000000000001------- >Voltage-dependent Channel; SWP:P60590; PDB:1KOZA DCVRFWGKCSQTSDCCPHLACKSKWPRNICVWDGSV 000000000111100000000011100000000123 >HEPATOCYTE NUCLEAR FACTOR; SWP:Q63244; PDB:1KQ8A PKPPYSYIALITMAIRDSAGGRLTLAEINEYLMGKFPFFRGSYTG ------000000000000000000000000000000000011110 WRNSVRHNLSLNDCFVKVLRDPSRPWGKDNYWMLNPNSEYTFADG 000000000000000000111223444200000000--------- VFRRRRYRLS ---------- >ACTX-Hi:OB4219; SWP:P60272; PDB:1KQHA KCLAEAADCSPWSGDSCCKPYLCSCIFFYPCSCRPKGW 00000000012211000000000000000000000012 >TRANSFORMING GROWTH FACTO; SWP:Q90999; PDB:1KS6A QLPRLCKFCDVKATTCSNQDQCTSNCNITSICEKNNEVCAAVWRR 321000000000000000000000000000001111000000000 NDENVTLETICHDPQKRLYGHMLDDSSSEQCVMKEKKDDGGLMFM 000000000000000000000001000000000000000000000 CSCTGEECNDVLIFSAI 00000000000000001 >LATENT TRANSFORMING GROWT; SWP:P22064; PDB:1KSQA SADQPKEEKKECYYNLNDASLCDNVLAPNVTKQECCCTSGAGWGD 643211100000001111000101110000000000001000000 NCEIFPCPVLGTAEFTEMCPKGKGFVPAGE 000000000000000000001001112224 >GELATION FACTOR; SWP:P13466; PDB:1KSR_ ADPEKSYAEGPGLDGGECFQPSKFKIHAVDPDGVHRTDGGDGFVV 100000000000000000000000000000000000000000000 TIEGPAPVDPVMVDNGDGTYDVEFEPKEAGDYVINLTLDGDNVNG 000000000000000000000000000000000000000000000 FPKTVTVKPA 0000000010 >KALIOTOXIN; SWP:P24662; PDB:1KTX_ GVEINVKCSGSPQCLKPCKDAGMRFGKCMNRKCHCTP 1000110000000000000000000000000000000 >moricin; SWP:P82818; PDB:1KV4A AKIPIKAIKTVGKAVGKGLRAINIASTANDVFNFLKPKKRKA 643221110000001111111111000000111123467799 >Copper-transporting ATPas; SWP:Q04656; PDB:1KVIA MDPSMGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEE 643211000000000001100000000000000000000000000 KNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNPD 0000000000110100000000000000001122 >SRP19; SWP:O29010; PDB:1KVNA MKESVVWTVNLDSKKSRAEGRRIPRRFAVPNVKLHELVEASKELG 100000000000010111011101011000010000000000000 LKFRAEEKKYPKSWWEEGGRVVVEKRGTKTKLMIELARKIAEIRE 000000013455555321000000111100000000000000000 QKREQKKDKKKKKK 00001333234568 >RC-RNase4; SWP:Q9DFY6; PDB:1KVZA MQDWATFKKKHLTDTWDVDCDNLMPTSLFDCKDKNTFIYSLPGPV 100000000000000000000000000000000000000000000 KALCRGVIFSADVLSNSEFYLAECNVKPRKPCKYKLKKSSNRICI 000000000000000000000000000000000000000000000 RCEHELPVHFAGVGICP 00000000000000011 >CELL DIVISION CONTROL PRO; SWP:P32797; PDB:1KXLA MRMSKMARKDPTIEFCQLGLDTFETKYITMFGMLVSCSFDKPAFI ----98531100011101101111100000000000001111100 SFVFSDFTKNDIVQNYLYDRYLIDYENKLELNEGFKAIMYKNQFE 000001111111111111111101122111100000000000000 TFDSKLRKIFNNGLRDLQNGRDENLSQYGIVCKMNIKVKMYNGKL 000000000000000001222321100100000000000010000 NAIVRECEPVPHSQISSIASPSQCEHLRLFYQRAFKRIGESAISR 000000000011100110111100000000000001000000000 YFEEYRRFFPIHRNGSHLA 00001112222-------- >INTESTINAL FATTY ACID-BIN; SWP:P12104; PDB:1KZWA AFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGN 210000000000000000000000000000010000000000010 KFTVKESSAFRNIEVVFELGVTFNYNLADGTELRGTWSLEGNKLI 000000000000000000000000001111000000000110000 GKFKRTDNGNELNTVREIIGDELVQTYVYEGVEAKRIFKKD 00000000000000000000000000000100000000001 >trigger factor; SWP:P0A850; PDB:1L1PA GSHMQATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLA 975311100000000000000000000000000000000000000 MGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKF 000000000000000000000000000000000000000000000 AINLKKVEERELPELT 0000000000012346 >Integrin beta-2:CYSTEINE-; SWP:P05107; PDB:1L3YA ECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQA 31121111112111000000000000000000001110001 >NEUROPHYSIN 1; SWP:P01175; PDB:1L5CA AVLDLDVRTCLPCGPGGKGRCFGPSICCGDELGCFVGTAEALRCQ 655578643210000000000000000000000000000000001 EENYLPSPCQSGQKPCGSGGRCAAAGICCSPDGCEEDPACDPEAA 112445554332100000000000000000000000000000000 FS 00 >DNA LIGASE; SWP:P26996; PDB:1L7BA MEKGGEALKGLTFVITGELSRPREEVKALLRRLGAKVTDSVSRKT 875421000000000000000000000000000000000000000 SYLVVGENPGSKLEKARALGVPTLTEEELYRLLEARTGKKAEELV 000000000000000000000000000000000000000001234 GS 57 >HYPOTHETICAL PROTEIN ZK65; SWP:P34661; PDB:1L7YA MSGGTAATTAGSKVTFKITLTSDPKLPFKVLSVPESTPFTAVLKF 999999997530000000000112321000000000000000000 AAEEFKVPAATSAIITNDGVGVNPAQPAGNIFLKHGSELRLIPRD 000000000000000000000000000000000000000000013 RVGH 5799 >upstream binding factor 1; SWP:P17480; PDB:1L8YA MGKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNM -43321000000000000000000000000000000000000000 EKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKLEHHHHH 0000000000000000000001111223455898899999----- H - >SGTx1; SWP:P56855; PDB:1LA4A TCRYLFGGCKTTADCCKHLACRSDGKYCAWDGTF 1000000000000000000000000000000135 >DIHYDROLIPOAMIDE ACETYLTR; SWP:P11961; PDB:1LAB_ AFEFKLPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVV 100000100011100000000001120000100010000012110 EIPSPVKGKVLEILVPEGTVATVGQTLITLDAPGY 00000000000000000000000000000001112 >Prion-like protein; SWP:Q9UKY0; PDB:1LG4A VQTRGIKHRIKWNRKALPSTAQITEAQVAENRPGAFIKQGRKLDI ----------------------------00000000000000000 DFGAEGNRYYEANYWQFPDGIHYNGCSEANVTKEAFVTGCINATQ 001000000000000000000011222211100000000000000 AANQGEFQKPDNKLHQQVLWRLVQELCSLKHCEFWLERG 0000000111110000000000000000111111122-- >LQ2; SWP:P45628; PDB:1LIR_ FTQESCTASNQCWSICKRLHNTNRGKCMNKKCRCYS 000000000000000000000000000000000001 >Calmodulin; SWP:P06787; PDB:1LKJA SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSE 999899976764554466679999765666545545776778899 AEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFK 987886798899999876656544544565678875576579889 VFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSDGSGEI 999999999765775797799999999999899879988999776 NIQQFAALLSK 66775577679 >PAS Kinase; SWP:Q96RG2; PDB:1LL8A GAMDPEFNKAIFTVDAKTTEILVANDKACGLLGYSSQDLIGQKLT 765322210000000000000000000000000000000000000 QFFLRSDSDVVEALSEEHMEADGHAAVVFGTVVDIISRSGEKIPV 000000000000001111123332211000000000000000000 SVWMKRMRQERRLCCVVVLEPVER 000000110000000000000013 >fibrillin 1; SWP:P35555; PDB:1LMJA TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMD 211111111111111100001111000001100011222111100 IDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 00000111100111000000000001112221111111111 >Psalmotoxin 1; SWP:P60514; PDB:1LMMA EDCIPKWKGCVNRHGDCCEGLECWKRRRSFEVCVPKTPKT 3211110001112111100000000011100000001245 >3-methyladenine DNA glyco; SWP:P05100; PDB:1LMZA MERCGWVSQDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLS 221122111110000001110000000000000000000000000 WITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHRG 000000000000000011000000000000000000111101000 KIQAIIGNARAYLQMEQNGEPFADFVWSFVNHQPQMTQATTLSEI 000000000000000001100000000000000000111111110 PTSTPASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGCC 000000000000000000000000000000000000000111212 CYPGNKP 2123345 >Alpha3W; SWP:NA; PDB:1LQ7A GSRVKALEEKVKALEEKVKALGGGGRIEELKKKWEELKKKIEELG 210000000000000000000000000000000000000000000 GGGEVKKVEEEVKKLEEEIKKL 1100000000000000000000 >dna-binding protein h-ns; SWP:P0ACF8; PDB:1LR1A GSHMSEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERRE ----00000000000000000000000000000000000000000 EESAAAAEVEERTRKL 0000000012443446 >LSIII; SWP:P01379; PDB:1LSI_ RECYLNPHDTQTCPSGQEICYVKSWCNAWCSSRGKVLEFGCAATC 110111111110011100000000001211111100000000000 PSVNTGTEIKCCSADKCNTYP 011110000000000000124 >venom toxin peptide MTx4; SWP:Q7YT39; PDB:1LU8A GCLEFWWKCNPNDDKCCRPKLKCSKLFKLCNFSF 1000000000010000000000000000000024 >Tyrosine-protein kinase I; SWP:Q03526; PDB:1LUIA NNLETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVS 210000000000000000000000000000000000100000000 VFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPLLIQY 000010111110000000000012200000000000000000000 HQYNGGGLVTRLRYPVCG 000011100000000001 >HYPOTHETICAL PROTEIN YacG; SWP:P0A8H8; PDB:1LV3A GSHMSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAA ---642100000000000000001010000000000000000024 EEKRIPSSGDLSESDDWSEEPKQ 57999999999999999999999 >Neural Cell Adhesion Mole; SWP:P13596; PDB:1LWRA AGPSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVKYRALAS 100000000000000000000000000000000000000000000 EWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFV 000000000000000000000000000000000000000000000 FRTSAQ 000000 >CAP18; SWP:P25230; PDB:1LYP_ GLRKRLRKFRNKIKEKLKKIGQKIQGLLPKLA 00000000000000000000000000000000 >Toxin BmTX3; SWP:Q9NBG9; PDB:1M2SA FGLIDVKCFASSECWTACKKVTGSGQGKCQNNQCRCY 2000000000000000000000000000000000000 >Placental calcium-binding; SWP:P26447; PDB:1M31A MACPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSF 310000000000000000012122110000000000000000000 LGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIAMMCNEFF 011121000000000000112110000000000000000000112 EGFPDKQPRKK 22222123567 >Monocytic leukemia zinc f; SWP:Q92794; PDB:1M36A GSRLPKLYLCEFCLKYMKSRTILQQHMKKCGWF 875321000010000000000000000000113 >Caltractin, isoform 1; SWP:P41208; PDB:1M39A MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKR --1110111112233222211000000000011110000000000 VAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY 0000111110000000000000111100000000012------- >DUAL SPECIFICITY PROTEIN; SWP:Q05923; PDB:1M3GA QGGPVEILPYLFLGSCSHSSDLQGLQACGITAVLNVSASCPNHFE 000000000000000000000000000000000000000000000 GLFRYKSIPVEDNQMVEISAWFQEAIGFIDWVKNSGGRVLVHSQA 000000000000000000000000000000000000000000000 GISRSATICLAYLMQSRRVRLDEAFDFVKQRRGVISPNFSFMGQL 000000000000000000000000000000000000000000000 LQFETQVLCH 0000000000 >fusion of the LIM interac; SWP:P70662; PDB:1M3VA GSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDI 986433222223333332211112211111211111111121222 GTSSYTKSGMILCRNDYIRLFGNSGAGGSGGHMGSGGDVMVVGEP 221111111100111111112244567898887655789999999 TLMGGEFGDEDERLITRLENTQFDAANGIDDE 99976533342211112233445666779999 >RC-RNase2 ribonuclease; SWP:Q9DFY8; PDB:1M58A MQNWETFQKKHLTDTRDVKCDAEMKKALFDCKQKNTFIYARPGRV 210000000000000000000000010000000000000000000 QALCKNIIVSKNVLSTDEFYLSDCNRIKLPCHYKLKKSSNTICIT 000000000000000000000000000000000000000000000 CENKLPVHFVAVEECP 0000000000000011 >AMPA receptor interacting; SWP:P97879; PDB:1M5ZA SPTPVELHKVTLYKDSGMEDFGFSVADGLLEKGVYVKNIRPAGPG 222000000000000111100000000000000000000000000 DLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN 000000000000000000000000000000000000000000000 P 1 >Silencer of Death Domains; SWP:O95429; PDB:1M7KA NQDQSSSLPEECVPSDESTPPSIKKIIHVLEKVQYLEQEVEEFVG ------------------222000000000000000000000000 KKTDKAYWLLEEMLTKELLELDSVETGGQDSVRQARKEAVCKIQA 000000000000000000000000111100000000000000000 ILEKLEKKG 000000001 >Chimera of Human and E. c; SWP:P10599; PDB:1M7TA MVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSL 100000000000000000000000000000000000000000000 SEKYSNVIFLEVDVDDAQDVAPKYGIRGIPTLLLFKNGEVAATKV 000000000000000000000000000000000000000000000 GALSKGQLKEFLDANLV 00000000000000001 >Protein YNR032c-a; SWP:Q6Q546; PDB:1M94A MGSSHHHHHHSSGLVPRGSHMIEVVVNDRLGKKVRVKCLAEDSVG --------------------0000000012210000000000000 DFKKVLSLQIGTQPNKIVLQKGGSVLKDHISLEDYEVHDQTNLEL 000000000000000000000100000000000000000000000 YYL 001 >Outer Arm Dynein Light Ch; SWP:Q9XHH2; PDB:1M9LA HMAKATTIKDAIRIFEERKSVVATEAEKVELHGMIPPIEKMDATL -00000000000000000000000000000000000000000000 STLKACKHLALSTNNIEKISSLSGMENLRILSLGRNLIKKIENLD 000000000000000000000000000000000000000000000 AVADTLEELWISYNQIASLSGIEKLVNLRVLYMSNNKITNWGEID 000000000000000000000000000000000000000000000 KLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKL 000000000000010000000000000000000000000000000 DGMPVDVDEREQANVARGG 0000000000000000001 >huwentoxin-iv; SWP:P83303; PDB:1MB6A ECLEIFKACNPSNDQCCKSSKLVCSRKTRWCKYQI 10000000000000000000000000000000001 >Segment polarity protein; SWP:P51141; PDB:1MC7A TVTLNMERHHFLGISIVGQSNDRGDGGIYIGSIMKGGAVAADGRI 000012111111000000012233210000000001100010100 EPGDMLLQVNDVNFENMSNDDAVRVLREIVSQTGPISLTVAKAWD 000000000000000000000000000000000000000000113 PTPRS 44678 >PROTEIN DISULFIDE ISOMERA; SWP:P07237; PDB:1MEK_ DAPEEEDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPE 532101100000000000000000000000000001100000000 YAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRN 000000111111100000000000000000000110000000000 GDTASPKEYTAGREADDIVNWLKKRTGPAA 011100000011000000000000112468 >Parkin; SWP:NA; PDB:1MG8A MGMIVFVRFNSSYGFPVEVDSDTSILQLKEVVAKRQGVPADQLRV 110000000111000000000000000000000000000000000 IFAGKELPNHLTVQNCDLEQQSIVHIVQRPRRR 000000000000000000000000000001234 >HUMAN MELANOMA GROWTH STI; SWP:P09341; PDB:1MGSA ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLK 975421000000000000000000000000000000000000000 NGRKACLNPASPIVKKIIEKMLNSDKSN 0000000000000000000000001356 >MACROPHAGE INFLAMMATORY P; SWP:P10889; PDB:1MI2A AVVASELRCQCLKTLPRVDFKNIQSLSVTPPGPHCAQTEVIATLK 998753321100000000000000000000011111000000000 GGQKVCLDPEAPLVQKIIQKILNKGKAN 0000000000000000000000000124 >Termicin; SWP:P82321; PDB:1MM0A ACNFQSCWATCQAQHSIYFRRAFCDRSQCKCVFVRG 100000000000000000000000000000000001 >MNT REPRESSOR; SWP:P03049; PDB:1MNTA ARDDPHFNFRMPMEVREKLKFRAEANGRSMNSELLQIVQDALSKP 531111010000000000000000010000000000000011123 SPVTGYRNDAERLADEQSELVKKMVFDTLKD 444454432221111221333---------- >Ser/Arg-related nuclear m; SWP:Q8IYB3; PDB:1MP1A SHMQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVI 211000000000000000000000000000000000000000000 EFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQ 000000000000000000000000000000000000000000000 ENIAGIPSAFLELKKEEIKQR 000000000000012457899 >Nicotiana alata plant def; SWP:Q8GTM0; PDB:1MR4A RECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILRRCLCTK 100000000011000000000000000000000001110000000 PC 01 >neurotoxin; SWP:Q9YGJ0; PDB:1MR6A MQCKTCSFYTCPNSETCPDGKNICVKRSWTAVRGDGPKREIRREC 100111111212211001110000000001124454311000000 AATCPPSKLGLTVFCCTTDNCNH 00022333421000000111111 >DNA-binding protein SMUBP; SWP:NA; PDB:1MSZA MGSLNGGSPEGVESQDGVDHFRAMIVEFMASKKMQLEFPPSLNSH ----------------11000000000000000000000000000 DRLRVHQIAEEHGLRHDSSGEGKRRFITVSKRAGSHHHHHH 000000000000000000000100000000000-------- >MARGATOXIN; SWP:NA; PDB:1MTX_ TIINVKCTSPKQCLPPCKAQFGQSAGAKCMNGKCKCYPH 310000000000000000000000000000100000000 >NUCLEOSIDE TRIPHOSPHATE P; SWP:NA; PDB:1MUT_ MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGET 221100000000111100000123444542110001110012211 PEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFWLVERW 100000000111111111100000000111111110000000000 EGEPWGKEGQPGEWMSLVGLNADDFPPANEPVIAKLKRL 101001112210000112211000001100000000011 >Bowman-Birk type protease; SWP:NA; PDB:1MVZA TKSTTTACCDFCPCTRSIPPQCQCTDVREKCHSACKSCLCTRSFP 864311000000011111111100000000000000000000000 PQCRCYDITDFCYPSCS 00000000111111111 >ZntA; SWP:NA; PDB:1MWYA SGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVV 100000000000010000000000000000000000000000000 DADNDIRAQVESALQKAGYSLRDEQAAE 0000000000000000000000000012 >DROSOMYCIN; SWP:NA; PDB:1MYN_ DCLSGRYKGPCAVWDNETCRRVCKEEGRSSGHCSPSLKCWCEGC 00000000000000000000000000000000000100000000 >MYOTROPHIN; SWP:NA; PDB:1MYO_ MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADC 210000000000000000000000000000000000000000000 GQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSK 000000000000000000000000000000000000000000000 GADKTVKGPDGLTALEATDNQAIKALLQ 0000000000000000000000000001 >KINASE ASSOCIATED PROTEIN; SWP:NA; PDB:1MZKA GPLGSSWLFLEVIAGPAIGLQHAVNSTSSSKLPVKLGRVSPSDLA --2110000000000000000000000000000000001100000 LKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSHSISHPDL 000000000000000011000000000010010000000001223 GSRKWGNPVELASDDIITLGTTTKVYVRISSQNEFQIPFKIGVAS 2110000000000000000000000000000012----------- DPMA ---- >Cyanovirin-N; SWP:NA; PDB:1N02A GLGKFIETCRNTQLAGSSELAAECKTRAQQFVSTKINLDDHIANI -10000000000000000000000000000000000000000000 DGTLKWQPSNFSQTCYNSAIQGSVLTSTCERTNGGYNTSSIDLNS 000000000000000000000000000000000000000000000 VIENVDGSLKYE 000000000001 >Hepatoma-derived growth f; SWP:NA; PDB:1N27A GSSGSSGEYKAGDLVFAKMKGYPHWPARIDELPEGAVKPPANKYP 776543100000000000000000000000001221110010000 IFFFGTHETAFLGPKDLFPYKEYKDKFGKSNKRKGFNEGLWEIEN 000000000000000000000000000000000000000000000 SGPSSG 013445 >Protein yfiA; SWP:NA; PDB:1N3GA MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKEP 110000010000000000000000000000010000000000000 QGFVADATINTPNGVLVASGKHEDMYTAINELINKLERQLNKLQH 000000000000000000000000000000000000000000011 KGEARRAATSVKDANFVEEVEEE 23568999999999999999999 >floral defensin-like prot; SWP:Q8H6Q1; PDB:1N4NA ATCKAECPTWDSVCINKKPCVACCKKAKFSDGHCSKILRRCLCTK 000000000010000000000000000000000000000000000 EC 00 >Interferon-alpha/beta rec; SWP:P48551; PDB:1N6UA SYDSPDYTDESCTFKISLRNFRSILSWELKNHSIVPTHYTLLYTI 999886542210000000000000000000111110000000000 MSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEGFSGNT 000000000010000000000000000000000000000000000 TLFSCSHNFWLAIDMSFEPPEFEIVGFTNHINVMVKFPSIVEEEL 000000000000000000000000000010000000000001111 QFDLSLVIEEQSEGIVKKHKPEIKGNMSGNFTYIIDKLIPNTNYC 111000000000000000000001000000000000011000000 VSVYLEHSDEQAVIKSPLKCTLLPPGQESEFS 00000000000000000000000011245789 >Hypothetical 12.3 kDa pro; SWP:Q03759; PDB:1N6ZA MSKSNTYRMLVLLEDDTKINKEDEKFLKGKPGKMHEFVDELILPF 122100000000000012346676798975331000000000000 NVDELDELNTWFDKFDAEICIPNEGHIKYEISSDGLIVLMLDKEI 000000000000000000000000000000000000000000000 EEVVEKVKKFVEENN 000000000000000 >Potassium channel blockin; SWP:P58498; PDB:1N8MA IEAIRCGGSRDCYRPCQKRTGCPNAKCINKTCKCYGCS 21000000000000000000000000000000000012 >orf, hypothetical protein; SWP:NA; PDB:1N91A MDGVMSAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAP 643100000000000000000000000000000000000000000 PVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQ 000000000000000000000000000000000000000000000 IPPEVAALINLEHHHHHH 000000000013235699 >Prolactin; SWP:P01236; PDB:1N9DA LPICPGGAARCQVTLRDLFDRAVVLSHYIHNLSSEMFSEFDKRYT 221111000000000000000000000000000000000000000 HGRGFITKAINSCHTSSLATPEDKEQAQQMNQKDFLSLIVSILRS 000000000011111222210000000000000000000000000 WNEPLYHLVTEVRGMQEAPEAILSKAVEIEEQTKRLLEGMELIVS 000000000000000000000000000000000000000000000 QVHPETKENEIYPVWSGLPSLQMADEESRLSAYYNLLHCLRRDSH 000000000000000011110000000000000000000000000 KIDNYLKLLKCRIIHNNNC 0000000001358999998 >Hellethionin D; SWP:P60057; PDB:1NBLA KSCCRNTLARNCYNACRFTGGSQPTCGILCDCIHVTTTTCPSSHP 000000000000000000000000000000000000000000000 S 0 >TRANSCRIPTIONAL FACTOR SW; SWP:P08153; PDB:1NCS_ TLPRGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE 642210000000000000000000000000000000000000001 DR 24 >Translation initiation fa; SWP:P0A705; PDB:1ND9A TDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQTLI 000000000000000000000000000000100000000000110 DHLN 0001 >30S ribosomal protein S28; SWP:O26356; PDB:1NE3A MDDATPAEVIEVLKRTGMTGEVMQVKCRILDGRDKGRILTRNVMG 320000000000001133321000000000000000000000000 PIREGDILMLLDTIREAKEIRTP 00000000000011112234568 >ergtoxin; SWP:Q86QT3; PDB:1NE5A DRDSCVDKSRCAKYGYYQECQDCCKNAGHNGGTCMFFKCKCA 211000000000000000000000000000000000000000 >P75 LOW AFFINITY NEUROTRO; SWP:P07174; PDB:1NGR_ GNLYSSLPLTKREEVEKLLNGDTWRHLAGELGYQPEHIDSFTHEA 210000011000000000000000000000000000000000000 CPVRALLASWGAQDSATLDALLAALRRIQRADIVESLCSE 0000000000000100000000000000000000000113 >Probable Thioredoxin; SWP:O26898; PDB:1NHOA MVVNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDR 000000000001100000000000000000000000000000000 EKAIEYGLMAVPAIAINGVVRFVGAPSREELFEAINDEME 0000000000000000000000000000000000000000 >Hypothetical protein ygdK; SWP:P0AGF2; PDB:1NI7A MTNPQFAGHPFGTTVTAETLRNTFAPLTQWEDKYRQLIMLGKQLP 765432110001100000000000000100000000000000000 ALPDELKAQAKEIAGCENRVWLGYTVAENGKMHFFGDSEGRIVRG 000000000000011100000000000000000000000000000 LLAVLLTAVEGKTAAELQAQSPLALFDELGLRAQLSASRSQGLNA 000000000000000000000000000000011111111100000 LSEAIIAATKQVLEHHHHHH 00000000000000------ >HAINANTOXIN-I; SWP:P83591; PDB:1NIXA ECKGFGKSCVPGKNECCSGYACNSRDKWCKVLL 110000000000000000000000000000012 >HAINANTOXIN-IV; SWP:P83471; PDB:1NIYA ECLGFGKGCNPSNDQCCKSSNLVCSRKHRWCKYEI 10000000000000000000000000000000001 >superman protein; SWP:Q38895; PDB:1NJQA WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL 5321000000000000000000000000246899999 >NK-LYSIN; SWP:Q29075; PDB:1NKL_ GYFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKILRGLC 100000000000000000010000000000000000000000000 KKIMRSFLRRISWDILTGKKPQAICVDIKICKE 000000000000000000000000000000012 >Transcriptional repressor; SWP:P03050; PDB:1NLAA MKGMSKMPQFLNRWPREVLDLVRKVAEENGRSVNSEIYQRVMESF 975421000000000000000000000000000000000000000 KKEGRIGAHHHHHHKNQHE 00000112----------- >poly(A)-binding protein; SWP:NA; PDB:1NMRA GSSLASQGQNLSTVLANLTPEQQKNVLGERLYNHIVAINPAAAAK 999999875443221111111000000000000000000000000 VTGMLLEMDNGEILNLLDTPGLLDAKVQEALEVLNRHMNV 0000000000000000000000000000000001324556 >Hypothetical protein HI14; SWP:NA; PDB:1NNVA GSHMTTEIKKLDPDTAIDIAYDIFLEMAGENLDPADILLFNLQFE ---764221100000000000000000000000000000000000 ERGGVEFVETADDWEEEIGVLIDPEEYAEVWVGLVNEQDEMDDVF 101000000001111111111100100000000011221111000 AKFLISHREEDREFHVIWKK 00000000111000000001 >ALY; SWP:NA; PDB:1NO8A SRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDADI ----------------------------00000000011000000 QELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYN 000000000000000012444331000000000000000000000 GVPLDGRPMNIQLVTS 0000100000000135 >Oxytetracycline polyketid; SWP:NA; PDB:1NQ4A MTLLTLSDLLTLLRECAGEEESIDLGGDVEDVAFDALGYDSLALL 100000000000000000111111121000000000000000000 NTVGRIERDYGVQLGDDAVEKATTPRALIEMTNASLTGASPSAGG 000000000000000000000000000000000000001368999 AARDK 99999 >DNA-binding protein tfx; SWP:NA; PDB:1NR3A MRERGWSQKKIARELKTTRQNVSAIERKAMENIEKSRNTLDFVKS 753210100000000000111110000001111122110000000 LKSPVRILCRRGDTLDEIIKRLLEESNKEGIHVIHDSITLAFLIR 110000000000000000000000000000000000000000000 EKASHRIVHRVVKSDFEIGVTRDGEIIVDLNS 00000000000000000000000000000001 >NEUROTOXIN V, CSE-V; SWP:NA; PDB:1NRA_ KKDGYPVDSGNCKYECLKDDYCNDLCLERKADKGYCYWGKVSCYC 000000000000000000000000000000000000000000000 YGLPDNSPTKTSGKCNPA 000000000000000000 >Calgizzarin; SWP:NA; PDB:1NSHA SRPTETERCIESLIAVFQKYAGKDGHSVTLSKTEFLSFMNTELAA 521000000000000000000123321000000000000000000 FTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLAVACHES 001221110000000111123321000000000000000000011 FVKAAPPQKRF 01222444578 >PROTEASE; SWP:NA; PDB:1NSOA WVQPITAQKPSLTLWLDDKMFTGLINTGADVTIIKLEDWPPNWPI 321212221110000010000000111111111111111122222 TDTLTNLRGIGQSNNPKQSSKYLTWRDKENNSGLIKPFVIPNLPV 233232333322121221111100000110000011111122211 NLWGRDLLSQMKIMMAS 11111101111122447 >PROTEIN (NITROGEN REGULAT; SWP:NA; PDB:1NTCA MDLPGELFEASTPDSPSHLPPDSWATLLAQWADRALRSGHQNLLS 999999999999999999864200000000000000011010000 EAQPELERTLLTTALRHTQGHKQEAARLLGWGAATLTAKLKELGM 000000000000000000000000000000000000000000001 E 2 >Hypothetical protein AQ_1; SWP:NA; PDB:1NWBA MQEQAQQFIFKVTDKAVEEIKKVAQENNIENPILRIRVVPGGCSG 432111100000000000000000000000000000000112432 FQYAMGFDDTVEEGDHVFEYDGVKVVIDPFSMPYVNGAELDYVVD 100000011011110000000000000000001000100000011 FMGGGFTIRNPNATGSCGCGSSFSCGLEHHHHHH 22110000011----------------------- >Complement decay-accelera; SWP:NA; PDB:1NWVA FRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSL 877655434343211234345566665433211123454545554 SPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGGILFGA 321123456543323343455543332221221112334334433 TISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREH 221111233221221112233455544332222222234 >conserved hypothetical pr; SWP:NA; PDB:1NXIA MSHQDDYLSVEELIEIQKEETRDIIQALLEDGSDPDALYEIEHHL 999975421000000000000000000000011000000000000 FAEDFDKLEKAAVEAFKMGFEVLEAEETEDEDGNKLLCFDATMQS 000000000000000000000000000001222100000000000 ALDAKLIDEQVEKLVNLAEKFDIIYDGWGTYYEGLEHHHHHH 000000000000000000000000000000001224578999 >30S ribosomal protein S28; SWP:NA; PDB:1NY4A MAEDEGYPAEVIEIIGRTGTTGDVTQVKVRILEGRDKGRVIRRNV 754320000000000001124200000000000000000000000 RGPVRVGDILILRETEREAREIKSRRAAALEHHHHHH 00000000000012234689999999----------- >Protein yrbA; SWP:NA; PDB:1NY8A MIEDPMENNEIQSVLMNALSLQEVHVSGDGSHFQVIAVGELFDGM 997542100000000000000000000011000000000000000 SRVKKQQTVYGPLMEYIADNRIHAVSIKAYTPAEWARDRKLNGFL 000000000000000000000000000000000000000000000 EHHHHHH 1345689 >Transcriptional activator; SWP:NA; PDB:1NY9A GINLTPEEKFEVFGDFDPDQYEEEVRERWGNTDAYRQSKEKTASY --------------------------------------------- TKEDWQRIQDEADELTRRFVALMDAGEPADSEGAMDAAEDHRQGI ----42100000000000000000000000000000000000000 ARNHYDCGYEMHTCLGEMYVSDERFTRNIDAAKPGLAAYMRDAIL 000111100000000000000000000000000000000000000 ANAVRHTP 00000002 >Calerythrin; SWP:NA; PDB:1NYAA TTAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAG 430000000000000100000000000000000000000001000 AAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLIFE 000000000000000000000000000000000000000000000 QGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSK 000000000000000000000000000000000000000000000 AEAAEAFNQVDTNGNGELSLDELLTAVRDFHFGRLDVELLG 00000000000000000000000000111121112211123 >Hypothetical 12.0 kDa pro; SWP:NA; PDB:1NYNA MGSSHHHHHHSSGLVPRGSHMSTVTKYFYKGENTDLIVFAASEEL --------------------5310000000000000000000000 VDEYLKNPSIGKLSEVVELFEVFTPQDGRGAEGELGAASKAQVEN 000000001000000000000000012332122110000000000 EFGKGKKIEEVIDLILRNGKPNSTTSSLKTKGGNAGTKAYN 01111100000000000101346899999999999999999 >Immunogenic protein MPT70; SWP:NA; PDB:1NYOA GDLVGPGCAEYAAANPTGPASVQGMSQDPVAVAASNNPELTTLTA 310000000000000000000000000000000000000000000 ALSGQLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTN 000000000000000000000000000000000000000000000 SSLLTSILTYHVVAGQTSPANVVGTRQTLQGASVTVTGQGNSLKV 000000000000000000000000000000000000001111000 GNADVVCGGVSTANATVYMIDSVLMPPA 0000000000000000000000000001 >PINCH protein; SWP:NA; PDB:1NYPA GSMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHR 432100000000000000000000000000000000000000000 HYERKGLAYCETHYNQLFGDV 000000000000000000012 >TRANSCRIPTION ANTITERMINA; SWP:NA; PDB:1NZ8A SIEWYAVHTLVGQEEKAKANLEKRIKAFGLQDKIFQVLIPTEEVV 100000000011101100000000011110110000000111112 ELREGGKKEVVRKKLFPGYLFIQMDLGDEEEPNEAWEVVRGTPGI 345665432111111010000000011222111100000000111 TGFVGAGMRPVPLSPDEVRHILEVSGLLG 12123332100000000000000111112 >TRANSCRIPTION ANTITERMINA; SWP:NA; PDB:1NZ9A AQVAFREGDQVRVVSGPFADFTGTVTEINPERGKVKVMVTIFGRE 753110000000000000000000000000100000000011100 TPVELDFSQVVKA 0000000000000 >Apoptosis regulator Bcl-W; SWP:NA; PDB:1O0LA GPLGSMATPASAPDTRALVADFVGYKLRQKGYVCGAGPGEGPAAD 999999975321000000000000000000000000000000000 PLHQAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQVSDE 000000000000000000000000000000000000000000000 LFQGGPNWGRLVAFFVFGAALCAESVNKEMEPLVGQVQEWMVEYL 000000000000000000000000000000000000000000000 ETRLADWIHSSGGWAEFTALYGDGALEEARRLREGNWASVRTVLT 000000000000000000000000000000000000000000000 GAVALGAL 00000002 >Gastrotropin; SWP:NA; PDB:1O1UA AFTGKFEMESEKNYDEFMKLLGISSDVIEKARNFKIVTEVQQDGQ 100000000000000000000000000000000000000000000 DFTWSQHYSGGHTMTNKFTVGKESNIQTMGGKTFKATVQMEGGKL 000000012210000000000000000012210000000001000 VVNFPNYHQTSEIVGDKLVEVSTIGGVTYERVSKRLA 0000000000000000000000001000000000001 >PRE-MRNA PROCESSING PROTE; SWP:NA; PDB:1O6WA MSIWKEAKDASGRIYYYNTLTKKSTWEKPKELISQEELLLRENGW 200000000000000000000000000000000000000000000 KAAKTADGKVYYYNPTTRETSWTIPAFEKK 000011110000000000000000000012 >BIOTIN CARBOXYL CARRIER P; SWP:NA; PDB:1O78A MKLKVTVNGAGKAGEGEIPAPLAGTVSKILVKEGDTVKAGQTVLV 999999986432111111111111001000010000000000000 LEAMKMETEINAPTDGKVEKVLVKERDAVQGGQGLIKIG 012343210000000000000001111122111000001 >TUMOR NECROSIS FACTOR-IND; SWP:NA; PDB:1O7BT GVYHREARSGKYKLTYAEAKAVCEFEGGHLATYKQLEAARKIGFH 000000011000000000000000000000000000000000000 VCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYGIRLNRSERWDA 000000000000000000011100110000000000000000000 YCYNPHAK 00000001 >GUANYLIN; SWP:NA; PDB:1O8RA VTVQDGNFSFSLESVKKLKDLQEPQEPRVGKLRNFAPIPGEPVVP 000000000000000000001222223433211111211111112 ILCSNPNFPEELKPLCKEPNAQEILQRLEEIAEDPGTCEICAYAA 211000000000000000000000000000000000000000000 CTGC 0001 >PORE-FORMING PEPTIDE AMEO; SWP:NA; PDB:1OF9A GEILCNLCTGLINTLENLLTTKGADKVKDYISSLCNKASGFIATL 321100000000000000001110000000000000000000000 CTKVLDFGIDKLIQLIEDKVDANAICAKIHAC 00000000000000000000000000000001 >STAPHOSTATIN A; SWP:NA; PDB:1OH1A GSMEQFELFSIDKFKCNSEAKYYLNIIEGEWHPQDLNDSPLKFIL 432110000000011111000000000000011221110000000 STSDDSDYICKYINTEHKQLTLYNKNNSSIVIEIFIPNDNKILLT 012211000000001110000000001100000000000000000 IMNTEALGTSPRMTFIKHK 0000112221100000012 >SENSOR PROTEIN DCUS; SWP:NA; PDB:1OJGA SDMTRDGLANKALAVARTLADSPEIRQGLQKKPQESGIQAIAEAV 111000000000000000100000000000100100000000011 RKRNDLLFIVVTDMQSLRYSHPEAQRIGQPFKGDDILKALNGEEN 111111000000011000001100000111111111111111000 VAINRGFLAQALRVFTPIYDENHKQIGVVAIGLELSRVTQQINDS 000111111100000000011110000000000111111222233 R 2 >conserved protein MTH11; SWP:NA; PDB:1OQKA GSHMLITPRNIFRHELIGLSVRIARSVHRDIQGISGRVVDETRNT ------------542100000000000000000000000000000 LRIEMDDGREITVPKGIAVFHFRTPQGELVEIDGRALVARPEERI 000000000000000000000000000000000001111123445 KKKFRKP ------- >UV excision repair protei; SWP:NA; PDB:1OQYA GPLGSSAVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDA -----9999999999999999999999999999999999999999 FPVAGQKLIYAGKILSDDVPIRDYRIDEKNFVVVMVTKTKAGQGT 999999999999999999999999999999999999999999999 SAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAP 999999999999999999999999999999999999999999999 TTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGY 999999999999999999999999999999999999999999999 ERERVVAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSE 999999999999999999999999999999999999999999999 QPATEAAGENPLEFLRDQPQFQNMRQVIQQNPALLPALLQQLGQE 999999999999999999999999999999999999999999999 NPQLLQQISRHQEQFIQMLNEPPGELADISDVEGEVGAIGEEAPQ 999999999999999999999999999999999999999999999 MNYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFL 999999999999999999999999999999999999999999999 LSQNFDDE 99999999 >acyl carrier protein; SWP:NA; PDB:1OR5A MSALTVDDLKKLLAETAGEDDSVDLAGELDTPFVDLGYDSLALLE -00000000000000000000000000000000000000000000 TAAVLQQRYGIALTDETVGRLGTPRELLDEVNTTPATA 00000000000000000000000000000000000000 >Viscotoxin C1; SWP:NA; PDB:1ORLA KSCCPNTTGRNIYNTCRFAGGSRERCAKLSGCKIISASTCPSDYP 100000000000000000000000000000000000011011000 K 0 >protein Cue2; SWP:NA; PDB:1OTRA NDDHESKLSILMDMFPAISKSKLQVHLLENNNDLDLTIGLLLKEN -------2-----------655-5-----------1-------6- DDKS ---- >Alpha-2-macroglobulin rec; SWP:NA; PDB:1OV2A YSREKNQPKPSPKRESGEEFRMEKLNQLWEKAQRLHLPPVRLAEL ----------------21000000000000000000000000000 HADLKIQERDELAWKKLKLDGLDEDGEKEARLIRNLNVILAKYGL 000000000000000000000000000000000000000000000 DGKKDARQV 02457899- >50S Ribosomal Protein L18; SWP:NA; PDB:1OVYA MITKVDRNAVRKKRHARIRKKIFGTTERPRLSVFRSNKHIYAQII -----------------------4653210000000100000000 DDTKSATIVSASTLDKEFGLDSTNNIEAAKKVGELVAKRALEKGI 001111110000111111121111110000000000000011111 KQVVFDRGGYLYHGRVKALADAAREAGLEF 100100111111100000000000000101 >Serine/threonine-protein; SWP:NA; PDB:1OW5A GHHHHHHGDEKTNDLPFVQLFLEEIGCTQYLDSFIQCNLVTEEEI ---------------000000000000000000000000000000 KYLDKDILIALGVNKIGDRLKILRKSKSFQRDKRIEQVNR 000000000000000000000000000000---------- >Spectrin alpha chain, ery; SWP:NA; PDB:1OWAA MEQFPKETVVESSGPKVLETAEEIQERRQEVLTRYQSFKERVAER 999999999999999999999999999999999997765555677 GQKLEDSYHLQVFKRDADDLGKWIMEKVNILTDKSYEDPTNIQGK 899999999999877656645655786899999999999999999 YQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEE 898678668768978999999999999999999999999998899 LRHLWDLLLELTLEKGDQLLR 678657744553455467667 >Fibronectin first type II; SWP:NA; PDB:1OWWA GPLGSSGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPK -----1000000122221100000000000111000000000000 NSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVT 111100000000000000000000000000000000011000000 RFDFTTTS 00000011 >Lupus La protein; SWP:NA; PDB:1OWXA MRGSHHHHHHGSLEEKIGCLLKFSGDLDDQTCREDLHILFSNHGE --------9999876431000000011111100000000000010 IKWIDFVRGAKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTW 000000001000000000000000000000000000000000000 EVLEGEVEKEALKKIIEDQQESLNKWKSKGR 0000000000000000000011225799999 >double-stranded RNA-bindi; SWP:NA; PDB:1OYIA GSHMASKIYIDERSNAEIVCEAIKTIGIEGATAAQLTRQLNMEKR ------------110000000000000000000000000000000 EVNKALYDLQRSAMVYSSDDIPPRWFMTTEADEADAD 00000000000000000000100000001-------- >defensin ARD1; SWP:NA; PDB:1OZZA DKLIGSCVWGAVNYTSNCNAECKRRGYKGGHCGSFANVNCWCET 00000000010000000000000000000000001100000000 >Glutamate receptor intera; SWP:NA; PDB:1P1DA QVVHTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEA 211000000000000111100000011121222221100000111 DSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKV 110011110000000000000001111000000000000000000 TLEIEFDVAESVIPSSGTFHVKLPKKHSVELGITISSPSSRKPGD 000000000110000000000000011110100000012333321 PLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQIL 000000000100000010100100000001000111000000000 QQCEDLVKLKIRKDED 0001000000001124 >Cleavage stimulation fact; SWP:NA; PDB:1P1TA DPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRE 321000001000000000000000000000000000000000000 TGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKN 000000000000000000000000000000101000000000000 KEELKSLGTGAPVI 00000001234568 >rcsB; SWP:NA; PDB:1P4WA MRGSHHHHHHGSYTPESVAKLLEKISAGGYGDKRLSPKESEVLRL ------------110000000000000111212110000000000 FAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVDNDIALLNYLS 000000000000000000000000000000000000000000000 SVSMTPVDK 000000012 >De novo designed protein; SWP:NA; PDB:1P68A MYGKLNDLLEDLQEVLKNLHKNWHGGKDNLHDVDNHLQNVIEDIH 100000000000000000000000100000000000000000000 DFMQGGGSGGKLQEMMKEFQQVLDELNNHLQGGKHTVHHIEQNIK 000000000000000000000000000000010000000000000 EIFHHLEELVHR 000000000000 >CheY2; SWP:NA; PDB:1P6QA MSLAEKIKVLIVDDQVTSRLLLGDALQQLGFKQITAAGDGEQGMK 100000000000000000000000000000000000000000000 IMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQ 000000000000000000000000000000000000000000000 GDRALVQKAAALGANNVLAKPFTIEKMKAAIEAVFGALK 000000000000000000000000000000000000011 >Penicillinase repressor; SWP:NA; PDB:1P6RA MKKIPQISDAELEVMKVIWKHSSINTNEVIKELSKTSTWSPKTIQ 653211100000000000000000000000000000000000000 TMLLRLIKKGALNHHKEGRVFVYTPNIDESDYIEVKS 0000000000000000011000000001221135699 >RAC-beta serine/threonine; SWP:NA; PDB:1P6SA MNEVSVIKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKERPEAP 421000000000000122210000000000000000000011234 DQTLPPLNNFSVAECQLMKTERPRPNTFVIRCLQWTTVIERTFHV 442211101011010000000000000000112345543200000 DSPDEREEWMRAIQMVANSLK 000000000000000000001 >Potential copper-transpor; SWP:NA; PDB:1P6TA MLSEQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATET 642100000000000011000000000000000000000000000 VNVIYDPAETGTAAIQEKIEKLGYHVVTEKAEFDIEGMTCAACAN 000000000000000000000000000000000000011210000 RIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKL 000000000000000000000000000000000000000000000 GYKLKLKGEQDSIEGR 0000000113344689 >protein tyrosine phosphat; SWP:NA; PDB:1P8AA AAEKKAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFHV 321110000001111122100000000111121010000111111 GQSPDTRSQKVCKSNGVDISKQRARQITKADFSKFDVIAALDQSI 110100000000000111122111111100000000000000000 LSDINSMKPSNCRAKVVLFNPPNGVDDPYYSSDGFPTMFASISKE 000000001111100000111211111211111100000000011 MKPFLTEHGLI 00000001111 >Pea Albumin 1, subunit b; SWP:NA; PDB:1P8BA ASCNGVCSPFEMPPCGTSACRCIPVGLVIGYCRNPSG 2100000000000100000000000000000000012 >plasmid partition protein; SWP:NA; PDB:1P94A MSLEKAHTSVKKMTFGENRDLERVVTAPVSSGKIKRVNVNFDEEK 999999999999999999999999998888999877665444443 HTRFKAACARKGTSITDVVNQLVDNWLKENE 2332333344444434322332333444556 >Endothelial PAS domain pr; SWP:NA; PDB:1P97A GAMDSKTFLSRHSMDMKFTYCDDRITELIGYHPEELLGRSAYEFY 754210000000000000000000000000000000000000000 HALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVI 000000000000000000000000000000000000000000000 YNPRNLQPQCIMCVNYVLSEIEKN 000000000000000000000001 >chimera of Epidermal grow; SWP:NA; PDB:1P9JA VVSHFNDCPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 233322223433222111110000011110000000000011110 YRDLKWWEL 001122334 >orf, hypothetical protein; SWP:NA; PDB:1P9KA GSMIHRMSNMATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAE 999976531100000110000000000000000000000000000 GQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA 0000000000000000000000000000000001 >Probable ribosome-binding; SWP:NA; PDB:1PA4A MASYKKERLENDIIRLINRTVIHEIYNETVKTGHVTHVKLSDDLL -----2100000000000000011011100001111100001100 HVTVYLDCYNREQIDRVVGAFNQAKGVFSRVLAHNLYLAKAVQIH 000001111100000000000000000000000011112210100 FVKDKAIDNAMRIESIINSLKKSKPN 00112335666--------------- >Hypothetical protein Ta11; SWP:NA; PDB:1PAVA MDVKPDRVIDARGSYCPGPLMELIKAYKQAKVGEVISVYSTDAGT 100000000000000000000000000000000000000000000 KKDAPAWIQKSGQELVGVFDRNGYYEIVMKKVK 000000000000000000000000000000000 >Elongation factor 1-gamma; SWP:NA; PDB:1PBUA AKDPFAHLPKSTFALDEFKRKYSNEDTLSVALPYFWEHFDKDGWS 310000000000000000000000000000000000000000000 LWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGT 000000000000000000000000000000000000000000000 NNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQ 000000000000000000000000000000000000000000000 TLVREYFSWEGAFQHVGKAFNQGKIFK 000000000000000000000000000 >Hypothetical protein AF19; SWP:NA; PDB:1PC0A GLMVEVVESPNHSEVGIKGEVVDETQNTLKIMTEKGLKVVAKRGR 100000000012200000000012210000000000000011110 TFRVWYKGKIMRIKGD 0000000000000002 >PEC-60; SWP:NA; PDB:1PCE_ EKQVFSRMPICEHMTESPDCSRIYDPVCGTDGVTYESECKLCLAR 865310000112355554311111000000000000000000000 IENKQDIQIVKDGEC 000000000000001 >Myosin-binding protein C,; SWP:NA; PDB:1PD6A MHHHHHHSSMDEKKSTAFQKKLEPAYQVSKGHKIRLTVELADHDA ----------21101000000000000000000000000000000 EVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCV 000000000000000000000001000000000000000000000 VGGEKCSTELFVKE 00000000000000 >PEPNH1; SWP:NA; PDB:1PEH_ NEKKYHLQERVDKVKKKVKDVEEKSKEWVQKVE 877755433332221111000000000000000 >FERREDOXIN; SWP:NA; PDB:1PFD_ ATYNVKLITPDGEVEFKCDDDVYVLDQAEEEGIDIPYSCRAGSCS 100000000000000000000000000000000000111111111 SCAGKVVSGSIDQSDQSFLDDEQMDAGYVLTCHAYPTSDVVIETH 110000000000000010000000000000110000000000000 KEEEIV 000000 >TFIIH basal transcription; SWP:NA; PDB:1PFJA MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISH 653211000000000000000000000000000002222100000 MYADIKCQKISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKERD 000000000011111000000000000000000011110000000 AVKDLLQQLLPKFKRKAN 000000000000011357 >TFIIB; SWP:NA; PDB:1PFT_ MVNKQKVCPACESAELIYDPERGEIVCAKCGYVIEENIIDMGPEW 998531000000000000000000000000000001123467899 RAFDA 99999 >Swa2p; SWP:NA; PDB:1PGYA ALVDEVKDMEIARLMSLGLSIEEATEFYENDVTYERYLEILKSKQ 542000000000000000000000000000000000000000013 KE 46 >Cobatoxin 1; SWP:NA; PDB:1PJVA AVCVYRTCDKDCKRRGYRSGKCINNACKCYPY 10000000000000000000000100000001 >envelope protein; SWP:NA; PDB:1PJWA DKLALKGTTYGMCTEKFSFAKNPADTGHGTVVIELSYSGSDGPCK 975433332111000000000000001000000000000000000 IPIVSVASLNDMTPVGRLVTVNPFVATSSANSKVLVEMEPPFGDS 000000000001100000001000000000000000000000000 YIVVGMGDKQINHHWHKAGST 000001111000000122346 >Thiopurine S-methyltransf; SWP:NA; PDB:1PJZA GSHQSEVNKDLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGY --2100000000000000000000000000011100000000000 HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGD 000000000000000000000000000011000000100000000 FFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACS 000100000000000000000000000000000000000000000 GLLITLEYDQALLEGPPFSVPQTWLHRVMSGNWEVTKVGGQDTLH 000000000000000000000000000000000000000000001 SSARGLKAGLERMDEHVYVLERV 00000000000000000000000 >TISSUE-TYPE PLASMINOGEN A; SWP:NA; PDB:1PK2_ SEGNSDCYFGNGSAYRGTHSLTESGASCLPWNSMILIGKVYTAQN 000000000000000000000000000000000000000000000 PSAQALGLGKHNYCRNPDGDAKPWCHVLKNRRLTWEYCDVPSCST 000000000000000000000000000000000000000000000 >PLASTOCYANIN; SWP:NA; PDB:1PLA_ AEVKLGSDDGGLVFSPSSFTVAAGEKITFKNNAGFPHNIVFDEDE 000000001100000000000000000000000000000000000 VPAGVNAEKISQPEYLNGAGETYEVTLTEKGTYKFYCEPHAGAGM 000000000000000000000000000000000000000000000 KGEVTVN 0000000 >PLECKSTRIN HOMOLOGY DOMAI; SWP:NA; PDB:1PLS_ MEPKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDNSPK 542100000000001222110000000000000000000000000 GMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERD 000001000000011112111000000001000000000000000 AWVRDINKAIKCIEGLEHHHHHH 00000000000000112347999 >DIHYDROLIPOYL SUCCINYLTRA; SWP:NA; PDB:1PMR_ SSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVV 100000000122221000000000000111111000000001000 LEVPASADGILDAVLEDEGTTVTSRQILGRLREGN 00000101000000000000000000000000123 >NACHT-, LRR- and PYD-cont; SWP:NA; PDB:1PN5A MQYKLILNGKTLKGETTTEAVDAATAEKVFKQYANDNGVDGEWTY --------------------------------------------- DDATKTFTVTEGSMAGGAWGRLACYLEFLKKEELKEFQLLLANKA -------------43211100000000000000000000000001 HSRSSSGETPAQPEKTSGMEVASYLVAQYGEQRAWDLALHTWEQM 235566666543211000000000000000000000000000000 GLRSLCAQAQEGAGHSLEHHHHHH 0000000000123579-------- >SCORPION TOXIN; SWP:NA; PDB:1PNH_ TVCNLRRCQLSCRSLGLLGKCIGVKCECVKH 2100000000000000000000000000001 >OCT-1 POU HOMEODOMAIN DNA; SWP:NA; PDB:1POG_ RRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEV 975310000000000000000000001000000000000000000 IRVWFCNRRQKEKRIDI 00000000011234578 >PHOTOSYSTEM I ACCESSORY P; SWP:NA; PDB:1PSE_ AIERGSKVKILRKESYWYGDVGTVASIDKSGIIYPVIVRFNKVNY 100000000000000000000000000011100000000000001 NGFSGSAGGLNTNNFAEHELEVVG 223444321000000000000001 >2S albumin; SWP:NA; PDB:1PSYA AEFMESKGEREGSSSQQCRQEVQRKDLSSCERYLRQSSSRRSTGE 999999999864211110000000000000000000122223444 EVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQI 433455443222211000000000000000000000000000000 QQGQLHGEESERVAQRAGEIVSSCGVRCMRQTRTN 01010111000000000000000000000001124 >kalata B2; SWP:NA; PDB:1PT4A CGETCFGGTCNTPGCSCTWPICTRDGLPV 00000000000000000000000000000 >Hypothetical protein MTH6; SWP:NA; PDB:1PU1A GSHMSLRKLTEGDLDEISSFLHNTISDFILKRVSAKEIVDIDITV ---421110000000000000000000000000000000000000 LVEYTDELKVDISAELYLDELSDADPGIVDEAVDAAYRSLESFLD 000000000000000000000000000000000000000000000 GFRE 1112 >Hypothetical protein C32E; SWP:NA; PDB:1PULA MGHHHHHHSHMAAAAGFNWDDADVKKRWDAFTKFGAATATEMTGK -----------------2112111100011112232432211111 NFDKWLKDAGVLDNKAITGTMTGIAFSKVTGPKKKATFDETKKVL 000000000001132211100000001112223322110000000 AFVAEDRARQSKKPIQDELDAITEKLAKLEAPSVG 000000000111000000000000011112----- >conserved hypothetical pr; SWP:NA; PDB:1PUZA MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELSE 432100000000000011100000000000000001110000000 FSEILEFQDQELLALINGHSETDKGHLIPMLEKIRRA 0000000000000000000000000000000000000 >Sda; SWP:NA; PDB:1PV0A MRKLSDELLIESYFKATEMNLNRDFIELIENEIKRRSLGHIISVS 110000000000000000000000000000000000000000012 S 2 >Focal adhesion kinase 1; SWP:NA; PDB:1PV3A GSPGISGGGGGIRSNDKVYENVTGLVKAVIEMSSKIQPAPPEEYV 999999986421121000000000000000000012222111100 PMVKEVGLALRTLLATVDESLPVLPASTHREIEMAQKLLNSDLAE 000000000000000000000000110000000000000000000 LINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKNLLDVIDQA 000000000000000000000000000000000000000000000 RLKMISQSRPH 00001113456 >UV excision repair protei; SWP:NA; PDB:1PVEA GSHMPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQ 653210111121100000000000000000000000000000000 QISQHQEHFIQMLNEPVQEAGGQGGGG 000000000000000112467889999 >K+ toxin-like peptide; SWP:NA; PDB:1PVZA TPFAIKCATDADCSRKCPGNPPCRNGFCACT 4320000000000000000000001000012 >ATP synthase beta chain,; SWP:NA; PDB:1PYVA MASRRLLASLLRQSAQRGGGLISRSLGNSIPKSASRASSRASPKG -31100000000000013322122111111223222212100000 FLLNRAVQY 000000001 >Erythronolide synthase; SWP:NA; PDB:1PZQA GSAASPAVDIGDRLDELEKALEALSAEDGHDDVGQRLESLLRRWN 643210000000000000000000000000000000000000000 SRRADAPSTSAISED 000003578999999 >sequestosome 1; SWP:NA; PDB:1Q02A GSPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALD 997653100000000000000000100000000000000000000 TIQYSKH 0001135 >hydrophilic protein; has; SWP:NA; PDB:1Q0VA MDRDYSTPEDEEELIRKAIELSLKESRNSASSEPIVPVVESKNEV 999999999999999888776777678999999999999999999 KRQEIEEEEDPDLKAAIQESLREAEEAKLRSERQKA 988788877677656555555556767888999999 >Cell division control pro; SWP:NA; PDB:1Q1OA GPLGSILFRISYNNNSNNTSSSEIFTLLVEKVWNFDDLIMAINSK 321100000000012233431000000000000000000000000 ISNTHNNNISPITKIKYQDEDGDFVVLGSDEDWNVAKEMLAENNE 000112221110000000000000000000000000000000000 KFLNIRLY 00000001 >DEK protein; SWP:NA; PDB:1Q1VA DEPLIKKLKKPPTDEELKETIKKLLASANLEEVTMKQICKKVYEN 999997531100000000000000000000000000000000000 YPTYDLTERKDFIKTTVKELISLEH 0000000000000000000000001 >Putative Nudix hydrolase; SWP:NA; PDB:1Q27A MGGVSDERLDLVNERDEVVGQILRTDPALRWERVRVVNAFLRNSQ 975432110011122111100011112111111000000000011 GQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREEL 000000123445543211000000000011100000000000001 NVEIDALSWRPLASFSPFQTTLSSFMCVYELRSDATPIFNPNDIS 010000000000000122211110000000000111112121111 GGEWLTPEHLLARIAAGEAAKGDLAELVRRCYREEE 000000000000000111111110011001111356 >PNC27; SWP:NA; PDB:1Q2FA PPLSQETFSDLWKLLKKWKMRRNQFWVKVQRG 75421110000000000000000000000012 >Neurotoxin BmK37; SWP:NA; PDB:1Q2KA AACYSSDCRVKCVAMGFSSGKCINSKCKCYK 1000000000000000000000000000000 >ALO3; SWP:NA; PDB:1Q3JA CIKNGNGCQPNGSQGNCCSGYCHKQPGWVAGYCRRK 211100000011122111120000111100000112 >Cytidylate kinase; SWP:NA; PDB:1Q3TA MKHHHHHHDDDDKMKTIQIAIDGPASSGKSTVAKIIAKDFGFTYL -------------00000000000000000000000000000000 DTGAMYRAATYMALKNQLGVEEVEALLALLDQHPISFGRSETGDQ 000000000000000000000000000000000000000000000 LVFVGDVDITHPIRENEVTNHVSAIAAIPEVREKLVSLQQEIAQQ 000000000000000000000000000000000000000000000 GGIVMDGRDIGTVVLPQAELKIFLVASVDERAERRYKENIAKGIE 000000000000000000000000000000000000000000000 TDLETLKKEIAARDYKDSHRETSPLKQAEDAVYLDTTGLNIQEVV 000000000000000000000000000000000000000000000 EKIKAEAEKRM 00000000000 >NifU-like protein; SWP:NA; PDB:1Q48A MAYSEKVIDHYENPRNVGSLDKKDSNVGTGMVGAPACGDVMQLQI 999999999999999876311211000000000011110000000 KVDDNGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLEEAGAIKN 001211000000000000110000000000000000000000100 SQIAEELELPPVKVHCSILAEDAIKAAIADYKAKQGLEHHHHHH 00000000011110000000000000000000011234689999 >EP-cadherin; SWP:NA; PDB:1Q55A MGSTRLRNASVWLCGLLCLLQVVPSINADVSGCKPGFSSAEYIFS --------------------------------------------- VNRRELERGRKLGKVNFSDCTTRKHGLYDVGDSRFRVLPDGTVLV --------------------------------------------- KRHVKLHKDTKFTISTWDARGIKHSTNIAVASKRHRSGEEAHSRS --------------------------------------------- SKLPVLTFPETHTGLKRKKRDWVIPPIKVSENERGPFPKRLVQIK --------------------9999999999999999999999999 SNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREE 999999999999999999999999999999999999999999999 YDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRG 999999999999999999999999999999999999999999865 SVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIP 568999999998778999999999999999999999988899999 NLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEG 999999999999999999976676667888999999999999999 KAIIQITDANDNAPIFDPKTYTALVPENEIGFEVQRLSVTDLDMP 977655556887766667887778888877666665555555433 GTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQ 224433467999999998755333564344455667789999999 YVLQITVENAEPFSVPLPTSTATVTVTVEDVNEAPFFVPAVSRVD 999999877789999999999899888899999999999999999 VSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDN 999999999999999999999999999999999999999999999 GIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHV 999999999999999999999999999999999999999999999 LDVNDNGPVPSPRVFTMCDQNPEPQVLTISDADIPPNTYPYKVSL 999999999999999999999999999999999999999999999 SHGSDLTWKAELDSKGTSMLLSPTQQLKKGDYSIYVLLSDAQNNP 999999999999999999999999999999999999999999999 QLTVVNATVCSCEGKAIKCQEKLVGGFDLPIILVILGSVLALLIL 99999999999999999999------------------------- FLLLLLFLKRKKVVKEPLLLPEDDTRDNIFYYGEEGGGEEDQDYD --------------------------------------------- LSQLHRGLDSRPDIMRNDVVPTLMPAPHYRPRPSNPDEIGNFIDE --------------------------------------------- NLDAADNDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSNSNDEHD --------------------------------------------- YNYLSDWGSRFRKLADMYGGDDDEE ------------------------- >PilS; SWP:NA; PDB:1Q5FA MWGKKDAGTELTNYQTLATNTIGMMKGVDGYAFTSGAKMTDTLIQ 332211100000000000000110011122222221000000000 AGAAKGMTVSGDPASGSATLWNSWGGQIVVAPDTAGGTGFNNGFT 000000000001222100000011100000000112444221000 ITTNKVPQSACVSISTGMSRSGGTSGIKINGNNHTDAKVTAEIAS 000000000000000000000010100000000000000000000 SECTADNGRTGTNTLVFNYNG 011234332111000000012 >General transcription fac; SWP:NA; PDB:1Q60A GSSGSSGLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFY 864211000000000000000000000000000000000000000 VEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAI 000000000000000000000000000000000000000000000 KESSGPSSG 001246799 >PDZ2b domain of PTP-Bas (; SWP:NA; PDB:1Q7XA GSSPPKPGDIFEVELAKNDNSLGISVTVLFDKGGVNTSVRHGGIY 864310000000000000000000000000000000000000000 VKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNT 000000000000000000000000000000000000000000000 GQVVHLLLEKGQSPTSKE 000000000000246788 >Cofilin, non-muscle isofo; SWP:NA; PDB:1Q8GA MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKK 642101000000000000011101000000000000000000000 NIILEEGKEILVGDVGQTVDDPYATFVKMLPDKDCRYALYDATYE 000001000000001111100000000000000000000000000 TKESKKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIKHEL 011000000000000000000110000000000000000001000 QANCYEEVKDRCTLAEKLGGSAVISLEGKPL 0000000000000000000000000000001 >Copper-transporting ATPas; SWP:NA; PDB:1Q8LA GSMAQAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLD 998643100000000001121100000000000000000000012 NQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQPKYLK 000000000100000000000000000000013579999 >INHIBITOR OF APOPTOSIS PR; SWP:NA; PDB:1QBHA GSHMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCF 996421100000000000000000000000000000001100100 CCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRY 001112111221000000000000000000000000000000000 PHLLEQLLSTS 00112357899 >PROTEIN (RUBREDOXIN VARIA; SWP:NA; PDB:1QCVA AKWVLKITGYIYDEDAGDPDNGISPGTKFEELPDDWVAPITGAPK 000000100000000000000000000000001111112332211 SEFEKLED 10000012 >PROTEIN (REGULATORY PROTE; SWP:NA; PDB:1QEYA RNDAERLADEQSELVKKMVFDTLKDLYKKTT 2100000000000000000000000000001 >PROTEIN (RIBONUCLEASE HI); SWP:NA; PDB:1QHKA GNFYAVRKGRETGIYNTWNECKNQVDGYGGAIYKKFNSYEQAKSF 000000013432000000000000001111010000000000000 LG 01 >DIHYDROLIPOAMIDE ACETYLTR; SWP:NA; PDB:1QJOA MVKEVNVPDIGGDEVEVTEVMVKVGDKVAAEQSLITVEGDKASME 100000001112100000000000000000000000001110000 VPAPFAGVVKELKVNVGDKVKTGSLIMIFEVEGAA 00000000000000000000000000000001357 >EPIDERMAL GROWTH FACTOR R; SWP:NA; PDB:1QJTA LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDL 100000011000000000000011100000000000000000000 ILGKIWDLADTDGKGVLSKQEFFVALRLVACAQNGLEVSLSSLSL 000000000000110000000000000000000000000000000 AVPPPRFHD 000000001 >HUWENTOXIN-I; SWP:NA; PDB:1QK6A ACKGVFDACTPGKNECCPNRVCSDKHKWCKWKL 110000000001111000000000000000001 >SELENOCOSMIA HUWENA LECTI; SWP:NA; PDB:1QK7A GCLGDKCDYNNGCCSGYVCSRTWKWCVLAGPW 10000012222100000000000000000125 >TOXIN 7 FROM PANDINUS IMP; SWP:NA; PDB:1QKYA DEAIRCTGTKDCYIPCRYITGCFNSRCINKSCKCYGCT 32110000000000000000001000000000001114 >POSTSYNAPTIC DENSITY PROT; SWP:NA; PDB:1QLCA AEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGA 100000000000000000000000000000000000000000000 AHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVA 000000000000000000000000000000000000000000000 KPSNA 00134 >HERPES SIMPLEX VIRUS PROT; SWP:NA; PDB:1QLOA MSWALEMADTFLDNMRVGPRTYADVRDEINKRGR 9986543233335658866764443223445679 >GROB[5-73]; SWP:NA; PDB:1QNKA TELRCQCLQTLQGIHLKNIQSVKVKSPGPHCAQTEVIATLKNGQK 110000000000000000000000000000000000000000000 ACLNPASPMVKKIIEKMLKNGKSN 000000000000000000001356 >PROTEIN (ALPHA2D); SWP:NA; PDB:1QP6A GEVEELEKKFKELWKGPRRGEIEELHKKFHELIKG 21000000000000000000000000000000013 >PHOSPHOCARRIER PROTEIN HP; SWP:NA; PDB:1QR5A MEQQSYTIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLK 000000000111111100000000000000000000000000000 SIMGVMSLGVGKDAEITIYADGSDEADAIQAITDVLSKEGLTE 1100000000000000000000000000000000111112222 >PROTEIN (HOMEOBOX VENTRAL; SWP:NA; PDB:1QRYA GSHMSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHL 999999999998654221000000000000000111001000000 TSLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEGHP 00000000000000000000000001111357999 >PROTEIN KINASE SPK1; SWP:NA; PDB:1QU5A EAETREQKLLHSNNTENVKSSKKKGNGRFLTLKPLPDSIIQESLE 999999999999999999997643210000000000000000000 IQQGVNPFFIGRSEDCNCKIEDNRLSRVHCFIFKKRHAVGKSMYE 000000000000000000000000000000000000011244443 SPAQGLDDIWYCHTGTNVSYLNNNRMIQGTKFLLQDGDEIKIIWD 211100000000000000000000000000000000000000000 KNNKFVIGFKVEINDTTGLFNEGLGMLQEQRVVLKQTAEEKDLVK 111000000000000000000011112110000000000000000 KL 01 >PROTEIN KINASE PKR; SWP:NA; PDB:1QU6A GSHMEMAGDLSAGFFMEELNTYRQKQGVVLKYQELPNSGPPHDRR 754333222332211111112212222211111222333444332 FTFQVIIDGREFPEGEGRSKKEAKNAAAKLAVEILNKEKKAVSPL 221111122222111222222211111111112222223334555 LLTTTNSSEGLSMGNYIGLINRIAQKKRLTVNYEQCASGVHGPEG 666777765555543222222222232222111122223333332 FHYKCKMGQKEYSIGTGSTKQEAKQLAAKLAYLQILSEETGSGC 22111112222211112221221111111112222222333444 >HSTX1 TOXIN; SWP:NA; PDB:1QUZA ASCRTPKDCADPCRKETGCPYGKCMNRKCKCNRC 1100000000000000000000000110000011 >30S RIBOSOMAL PROTEIN S27; SWP:NA; PDB:1QXFA MHSRFVKVKCPDCEHEQVIFDHPSTIVKCIICGRTVAEPTGGKGN 310000000000000000000000000000000000000111100 IKAEIIEYVDQIELEHHHHHH 0000000000001-------- >sulfide dehydrogenase; SWP:NA; PDB:1QXNA ADMGEKFDATFKAQVKAAKADMVMLSPKDAYKLLQENPDITLIDV 210000000000000000000000000000000000000000000 RDPDELKAMGKPDVKNYKHMSRGKLEPLLAKSGLDPEKPVVVFCK 000000000000000000001211000000000000000000011 TAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRSHHHH 222000000000000000000000000000000000000124579 HH 99 >Antigen Ki-67; SWP:NA; PDB:1R21A GSPEFPGGMWPTRRLVTIKRSGVDGPHFPLSLSTCLFGRGIECDI --------5321000000111110000000000000000000000 RIQLPVVSKQHCKIEIHEQEAILHNFSSTNPTQVNGSVIDEPVRL 000000000000000000000000000000000000000000000 KHGDVITIIDRSFRYENESLQNGRKSTEFPRKIREQEP 000000000000000000-------------------- >Proline/betaine transport; SWP:NA; PDB:1R48A CGGDNIEQKIDDIDHEIADLQAKRTRLVQQHPR 532100000000000000000000000000001 >RNA polymerase alpha subu; SWP:NA; PDB:1R4GA KPTMHSLRLVIESSPLSRAEKAAYVKSLSKCKTDQEVKAVMELVE 421000000001111111110000000000000000000000000 EDIESLTN 00011235 >conserved hypothetical pr; SWP:NA; PDB:1R57A MSNLEIKQGENKFYIGDDENNALAEITYRFVDNNEINIDHTGVSD 432100000000000011111000000000011000000000011 ELGGQGVGKKLLKAVVEHARENNLKIIASCSFAKHMLEKEDSYQD 223311000000000000000000000000000000000000011 VYLGLEHHHHHH 001234567999 >avirulence protein; SWP:NA; PDB:1R5EA MDNVTSSQLLSVRHQLAESAGLPRDQHEFVSSQAPQSLRNRYNNL -21000000000000000000000000000000000000000000 YSHTQRTLDMADMQHRYMTGASGINPGMLPHENVDDMRSAITDWS 000000000000000111112111121000000000000000000 DMREALQHAMGIHADIVDYKDDDDK 0000000000000112--------- >Genome polyprotein; SWP:NA; PDB:1R6RA MNDQRKKARNTPFNMLKRERNRVSTVQQLTKRFSLGMLQGRGPLK --------------------1000000000011111222110000 LFMALVAFLRFLTIPPTAGILKRWGTIKKSKAINVLRGFRKEIGR 000000000000000000000000000000000000000000000 MLNILNRRRR 0000000011 >50S ribosomal protein L29; SWP:NA; PDB:1R73A MKASELRNYTDEELKNLLEEKKRQLMELRFQLAMGQLKNTSLIKL 310000000000000000000000000000000000011000000 TKRDIARIKTILRERELGIRR 000000000000000001012 >Diacylglycerol kinase, de; SWP:Q16760; PDB:1R79A GSSGSSGTTLASIGKDIIEDADGIAMPHQWLEGNLPVSAKCTVCD 999999999999998654334332100000000000000000000 KTCGSVLRLQDWRCLWCKAMVHTSCKESLLTKCSGPSSG 000011110000000000000000000000000000245 >TypeIII-secreted protein; SWP:Q7CQD4; PDB:1R9KA GNASEGRAVLTSKTVKDFMLQKLNSLDIKGNASKDPAYARQTCEA ----00000000000000000000000000000000000000000 ILSAVYSNNKDQCCKLLISKGVSITPFLKEIGEAAQNAGLPGEIK 000000000000000000000000000000000000000000000 NGVFTPGGAGANPFVVPLIASASIKYPHMFINHNQQVSFKAYAEK 000000000000000000000000000000000000000000000 IVMKEVTPLFNKGTMPTPQQFQLTIENIANKYLQNAS 0000000000000000000000000000000000000 >PROTEIN (RA-DOMAIN OF RAL; SWP:Q12967; PDB:1RAXA GSPHMLSGSGLCNSSSALPLYNQQVGDCCIIRVSLDVDNGNMYKS ----------------------75310000000000122111000 ILVTSQDKAPAVIRKAMDKHNLEEEEPEDYELLQILSDDRKLKIP 000000000000000000000000000000000000010000000 ENANVFYAMNSTANYDFVLKKRTFT 0000000000000000000000123 >conserved hypothetical pr; SWP:Q9X116; PDB:1RDUA MARVAIPSVGKDLSSMVSDRFARAEYFIIYDTESGNVEVVENTIA 100000000000000000000000000000000000000000001 DAHGTGPKVVQSLVSKGVEYLIASNVGRNAFETLKAAGVKVYRFE 112110000000000000000000000000000000000000000 GGTVQEAIDAFSEGRLEELTTFTREG 00000000000000000000012234 >dynein light chain 2; SWP:NA; PDB:1RE6A GPLGSMSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAA 999754210000000000000000000000000000000000000 YIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILL 000000000000000000000000001101000000000000000 FKSG 0002 >GAMMA DELTA-RESOLVASE; SWP:P03012; PDB:1RES GRKRKIDRDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN 0000000000000000000000000000000000000000000 >second splice variant p63; SWP:Q9H3D4; PDB:1RG6A PPPYPTDCSIVSFLARLGCSSCLDYFTTQGLTTIYQIEHYSMDDL ----42100000000000000000000000000000000000000 ASLKIPEQFRHAIWKGILDHRQLHEFAAAS 00000000000000000000000013---- >Piccolo protein; SWP:Q9JKS6; PDB:1RH8A ASHPITGEIQLQINYDLGNLIIHILQARNLVPRDNNGYSDPFVKV 210000000000000000000000000000000111110000000 YLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISM 000011000000000000000000000000000000000000000 EQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYP 000000000000000011100000000000000000000000000 LKEQTES 0000123 >conserved hypothetical pr; SWP:Q9X074; PDB:1RHXA MALVLVKYGTDHPVEKLKIRSAKAEDKIVLIQNGVFWALEELETP 100000000000000000000000000000000000000000000 AKVYAIKDDFLARGYSEEDSKVPLITYSEFIDLLEGEEKFIG 000000000000000000000000000000000000000000 >Hepatoma-derived growth f; SWP:P51858; PDB:1RI0A MHHHHHHAMAMSRSNRQKEYKCGDLVFAKMKGYPHWPARIDEMPE ----------97654221100000000000000000000000001 AAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGKPNKRK 121211210000000000000000000000000000000000000 GFSEGLWEIENNPTVKASGY 00000000000011233456 >FYN-binding protein; SWP:O15117; PDB:1RI9A MGSSHHHHHHSSGKKLKKQEKEEKDFRKKFKYDGEIRVLYSTKVT -------------------10000000000000000000000000 TSITSKKWGTRDLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVL 000000000000000000000000000000000000000000000 RSYLADNDGEIY 000000------ >E6apc1 peptide; SWP:NA; PDB:1RIKA YKFACPECPKRFMRSDHLTLHILLHENKK 10000000000000000000000000135 >E6apc2 peptide; SWP:NA; PDB:1RIMA YKFACPECPKRFMRSDHLSKHITLHELLGEERR 000000000000000000000000000122345 >Tyrosine-protein kinase 6; SWP:Q13882; PDB:1RJAA SEPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVR 310000000000000000000000000000000000100000000 DTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQSLSHGL 001000000000000000000000000000000000000011010 RLAAPCRKHE 0000000124 >expressed protein; SWP:Q9FK81; PDB:1RJJA MATSGFKHLVVVKFKEDTKVDEILKGLENLVSQIDTVKSFEWGED 211100000000000000000000000000000000000000000 KESHDMLRQGFTHAFSMTFENKDGYVAFTSHPLHVEFSAAFTAVI 122211110110000000000000000000000000000000000 DKIVLLDFPVAAVKSSVVATP 000000000001223333456 >Small inducible cytokine; SWP:O14625; PDB:1RJTA FPMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITL 999997643333223222111111100112223343321111111 KENKGQRCLNPKSKQARLIIKKVERKNF 2343211111212100000000000235 >Parvalbumin alpha; SWP:P20472; PDB:1RJVA MSMTDLLNAEDIKKAVGAFSATDSFDHKKFFQMVGLKKKSADDVK 201000000000000000000100000000000000000000000 KVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAG 000000000000000000000000000000000000000000000 DKDGDGKIGVDEFSTLVAES 00000000000000000001 >Suppressor of G2 allele o; SWP:Q9Y2Z0; PDB:1RL1A GSHMTHQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELS -------21000000000000000000110000000000010000 ALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAV 000000110000000000000000000000110000000000000 RWEKLEGQGDVPTPKQFVADVKNL 010100012--------------- >Cytotoxin 1; SWP:P01451; PDB:1RL5A LKCNKLVPIAYKTCPEGKNLCYKMFMMSDLTIPVKRGCIDVCPKN 000000000000000000000000000000000000000000000 SLLVKYVCCNTDRCN 000000000000000 >RLF; SWP:Q61193; PDB:1RLF_ GSSDCRIIRVQMELGEDGSVYKSILVTSQDKAPSVISRVLKKNNR 421000000000000000000000000000000000000000000 DSAVASEFELVQLLPGDRELTIPHSANVFYAMDGASHDFLLRQRR 000000000000000000000000000000000000000000000 >Mu-O-conotoxin MrVIB; SWP:Q26443; PDB:1RMKA ACSKKWEYCIVPILGFVYCCPGLICGPFVCV 0000000112235532100000000111100 >CHIMERIC PROTEIN OF INTER; SWP:P10145; PDB:1RODA SAKELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSD 987654443221222212122110101223444332211000123 GRELCLDPASPIVKKIIEKMLNSDKSN 211111223322111000011012123 >FERREDOXIN; SWP:P0A3C9; PDB:1ROE_ ATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGAC 000000000000000000000000000000000001111111111 STCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILT 110100000000001111110110001001000000000000000 NQEEELY 0001112 >30S ribosomal protein S17; SWP:O26894; PDB:1RQ6A MGNIRTSFVKRIAKEMIETHPGKFTDDFDTNKKLVEEFSTVSTKH 876421100000000011222211110000000001111212211 LRNKIAGYITRIISQQK 00000000000000011 >conserved hypothetical pr; SWP:Q99TQ4; PDB:1RQ8A MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENREL 100000000000000000010000100000000000000000000 IKVHVLQNNFDDKKELAETLSEATRSELVQVIGSMIVIYRESKEN 000000000000000000000000000000000000000001112 KEIELPLEHHHHHH 110011-------- >Glycogen synthesis protei; SWP:P26649; PDB:1RRZA MGSSHHHHHHSSGLVPRGSHMDHSLNSLNNFDFLARSFARMHAEG --------------------4311100000000000000000000 RPVDILAVTGNMDEEHRTWFCARYAWYCQQMMQARELELEH 00000000001110000000000000000000001355456 >hypothetical protein PF10; SWP:Q8U1Z3; PDB:1RWSA AHHHHHHGSKMIKVKVIGRNIEKEIEWREGMKVRDILRAVGFNTE ---------000000000000000000000000000000000000 SAIAKVNGKVVLEDDEVKDGDFVEVIPVVSGG 00000000000000000000000000000000 >Hypothetical UPF0250 prot; SWP:P0A8J4; PDB:1RWUA MGTSHHHHHHSSGRENLYFQGHMKTKLNELLEFPTPFTYKVMGQA ----------------------98765422211000000000000 LPELVDQVVEVVQRHAPGDYTPTVKPSSKGNYHSVSITINATHIE 000000000000000010000000000111000000000000000 QVETLYEELGKIDIVRMVL 0000000000000000001 >Afimbrial adhesin AFA-III; SWP:Q57254; PDB:1RXLA HHHHHHGLVPRGSEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQA -------------31000000000000000000000000000000 LGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAW 011000000000000000000000001110000000000111000 TTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWA 000000000000000000000000100100000000000000000 KDNKQGFTPSGTTGTTKLTVT 000000000000000000001 >unknown; SWP:O27775; PDB:1RYJA MVIGMKFTVITDDGKKILESGAPRRIKDVLGELEIPIETVVVKKN 211000000001000000000000000000000000000000000 GQIVIDEEEIFDGDIIEVIRVIYGG 0000000000000000000011234 >Protein yjbJ; SWP:P68206; PDB:1RYKA MNKDEAGGNWKQFKGKVKEQWGKLTDDDMTIIEGKRDQLVGKIQE 432221111000000000000000000000000000000000000 RYGYQKDQAEKEVVDWETRNEYRW 000000000000000000000012 >SWI/SNF-related, matrix-a; SWP:O14497; PDB:1RYUA SSTTTNEKITKLYELGGEPERKMWVDRYLAFTEEKAMGMTNLPAV 320000000000111110000000000000000000110000000 GRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAA 000000000000000000000000000000000000000010000 SSLKKQYIQCLYAFECKIERGEDPPPDIFA 000000000000000100122334589999 >Regulatory protein cro; SWP:P09964; PDB:1RZSA MYKKDVIDHFGTQRAVAKALGISDAAVSQWKEVIPEKDAYRLEIV 000000000000000000000000000000000000000000000 TAGALKYQENAYRQAA 0000000000000246 >Protein AF2095(GR4); SWP:O28185; PDB:1RZWA MTLKQVIVVRDDLKLSRGKLAVQVAHAAIIGYLKSDSSLRRKWLD 000000000000000000000000000000000000000000000 EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLTEVPPGT 000000000000000000000000000000000000000000000 ITAVVIGPDEERKIDKVTGNLPLLKLEHHHHHH 000000000000000000000000000000000 >hypothetical protein PF04; SWP:Q8U3L1; PDB:1S04A MEWEMGLQEEFLELIKLRKKKIEGRLYDEKRRQIKPGDVISFEGG 100000000000000000000000000000000000000000000 KLKVRVKAIRVYNSFREMLEKEGLENVLPGVKSIEEGIQVYRRFY 000000000000000000000000000000000000000000000 DEEKEKKYGVVAIEIEPLEY 00000000000000000011 >Nephrocystin 1; SWP:O15259; PDB:1S1NA GSESHKWSTGEEYIAVGDFTAQQVGDLTFKKGEILLVIEKKPDGW --------2000000000000111000000000000000000000 WIAKDAKGNEGLVPRTYLEPYSE 00000000000000000000012 >Rubredoxin 2; SWP:P00272; PDB:1S24A PTSLEKLPSADVKGQDLYKTQPPRSDAQGGKAYLKWICITCGHIY -------------------------------10000000000000 DEALGDEAEGFTPGTRFEDIPDDWCCPDCGATKEDYVLYEEK 000000011000000000001110000111000000000134 >NADH-ubiquinone oxidoredu; SWP:O43678; PDB:1S3AA KAGMAAAAASRGVGAKLGLREIRIHLCQRSPGSQGVRDFIEKRYV -----------------0000000001100110000000000000 ELKKANPDLPILIRECSDVQPKLWARYAFGQETNVPLNNFSADQV 000000000000000111000000000000000000000000000 TRALENVLSGKA 000000000001 >Integrin beta-3; SWP:P05106; PDB:1S4XA GSSHHHHHHSSGLVPRGSHMKLLITIHDRKEFAKFEEERARAKWD --------------------1100000000000000000011111 TANNPLYKEATSTFTNITYRGT 1111100000001111222335 >Albumin 8; SWP:P23110; PDB:1S6DA PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREE 999997531000000000000000000000001356889999753 DHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNL 111000000000000000000000000000000000000000000 PIECNLMSQPCQM 0000000000012 >Alkylmercury lyase; SWP:P77072; PDB:1S6LA MKLAPYILELLTSVNRTNGTADLLVPLLRELAKGRPVSRTTLAGI --------------------6422111111111100000000000 LDWPAERVAAVLEQATSTEYDKDGNIIGYGLTLRETSYVFEIDDR 000000111111111111111110111222111111000000111 RLYAWCALDTLIFPALIGRTARVSSHCAATGAPVSLTVSPSEIQA 100000000011000110000000000000000000000000000 VEPAGMAVSLVLPQEAADVRQSFCCHVHFFASVPTAEDWASKHQG 000000000012346655554333321000000000000011111 LEGLAIVSVHEAFGLGQEFNRHLLQTMSSRTP 22210000000000000001112234679999 >envelope glycoprotein; SWP:Q913C7; PDB:1S6NA ISEFQLKGTTYGVCSKAFKFLGTPADTGHGTVVLELQYTGTDGPC 111111111100000000000000000000000000000000000 KVPISSVASLNDLTPVGRLVTVNPFVSVATANAKVLIELEPPFGD 000000000000000000000000000000000000000000000 SYIVVGRGEQQINHHWHKSGSSIGK 0000000000000000001111111 >KvAP CHANNEL; SWP:P60980; PDB:1S6XA ECGKFMWKCKNSNDCCKDLVCSSRWKWCVLASPF 1000000000000000000000000000001356 >Hepatocyte nuclear factor; SWP:O08755; PDB:1S7EA EINTKEVAQRITTELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPK 432222111111222223322332223222332211122223343 PWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAACKRKEQEHGKD 444333333221211121123445434434444566554443333 RGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLE 333333333322233222212222333223333223322333332 LSTVSNFFMNAR 221122234444 >Toxin BmKK4; SWP:Q95NJ8; PDB:1S8KA TQCQSVRDCQQYCLTPDRCSYGTCYCKTT 00000000000000000000000000013 >copper chaperone ScAtx1; SWP:P73213; PDB:1SB6A MTIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITS 100000000011100000000000000000000000000000000 ALGEEQLRTAIASAGHEVE 0000000000000000001 >SCORPION TOXIN OSK1; SWP:P55896; PDB:1SCO_ GVIINVKCKISRQCLEPCKKAGMRFGKCMNGKCHCTPK 00000000000000000000000000000000000000 >SCYLLATOXIN; SWP:P16341; PDB:1SCY_ AFCNLRMCQLSCRSLGLLGKCIGDKCECVKH 3100000000000000000000100000002 >ubiquitin family; SWP:Q9MAB9; PDB:1SE9A MGHHHHHHLEAEVHNQLEIKFRLTDGSDIGPKAFPDATTVSALKE ---------765321000000000000000000000000000000 TVISEWPREKENGPKTVKEVKLISAGKVLENSKTVKDYRSPVSNL 000000111112111000000000000000000000111223333 AGAVTTMHVIIQAPVTEKEKKPKGDPKMNKCVCSVM 32100000000011234567---------------- >orf, hypothetical protein; SWP:NA; PDB:1SG5A MSMNDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASDL 975421100000000000000000000000000000000000000 VSRKNVEYLVVEAAGETRELRLDKITSFSHPEIGTVVVSES 00000000000001000000000000000000000000122 >Putative Cation transport; SWP:P0AE63; PDB:1SG7A MGSSHHHHHHHHSSGFNPRGSPYKTKSDLPESVKHVLPSHAQDIY ---------------------000000000000000000000000 KEAFNSAWDQYKDKEDRRDDASREETAHKVAWAAVKHEYAKGDDD 000000000000001210000000000000000000000000010 KWHKKS 000000 >EPHRIN TYPE-B RECEPTOR 2; SWP:P28693; PDB:1SGG_ YTSFNTVDEWLDAIKMSQYKESFASAGFTTFDIVSQMTVEDILRV 000000000000000000000000000000000000000000000 GVTLAGHQKKILNSIQVMRAQM 0000000000000000000000 >TRYPSIN INHIBITOR; SWP:P31713; PDB:1SHP_ SICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFET 100000000111100000000000000000000011110000000 LHQCRAICRA 0000000012 >SCORPION INSECTOTOXIN I5A; SWP:P15222; PDB:1SIS_ MCMPCFTTDPNMAKKCRDCCGGNGKCFGPQCLCNR 00000000000000000000000000000000012 >Nonspecific lipid-transfe; SWP:P83434; PDB:1SIYA MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRR 110000000000000000111100000000000000001000000 AVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI 000000000011111111100000000000001111111110111 N 2 >SH3 domain-binding glutam; SWP:Q9H299; PDB:1SJ6A MSGLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNA 321000000011110000000000000000000000000000000 LRDEMRALAGNPKATPPQIVNGDQYCGDYELFVEAVEQNTLQEFL 000000000000000000000100000000000000000000000 KLALEHHHHHH 01134------ >Major prion protein 2; SWP:P10279; PDB:1SKHA MVKSKIGSWILVLFVAMWSDVGLCKKRPKP 865311100000000000000122345799 >recombinant Ib pronapin; SWP:Q8GT96; PDB:1SM7A QPQKCQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLR 421000100000000000000001112223456654444421100 EQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAK 000000000000000000000000001234433210000000000 NLPNVCNMKQIGTCPFIAI 0000000001011111111 >Nucleobindin 1; SWP:Q02818; PDB:1SNLA GSHMLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEAL ----99999999987665310000000000000000000000000 FTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVT 000000001112333221110000000000000000000000000 LEEFLASTQRKEF 0000000012456 >Cytochrome C oxidase asse; SWP:Q92RG6; PDB:1SO9A MVPLYDMFCRVTGYNGTTQRVEQASDLILDEKIKVTFDANVAAGL --------------------1111111011000000000000100 PWEFVPVQRDIDVRIGETVQIMYRAKNLASTPTTGQATFNVTPMA 000000000000000000000000000000000001000000000 AGAYFNKVQCFCFTETTLEPGEEMEMPVVFFVDPEIVKPVETQGI 000001123333221000000000000000000000011110100 KTLTLSYTFYPREPSKPVAQVKAKAENKL 0000000000000110------------- >5,10-methenyltetrahydrofo; SWP:O67621; PDB:1SOUA MLKSELRKKVLHKRINLSEEERRRLSEKVISNLKSLPEFKKSKKV 311100000000000000000000000000000000000000000 ALYCPIKGEVDLTPLFPEVLKEKELILPKVEGNEISLYRVHSPAC 000001111000000000000000000001111100000000111 LGVGAFGIMEPVEGERVNPEDVDFIAVPGVAFDLEGYRLGFGKGY 111111111001100000000000000001000010011112221 YDRLLKRVKGLKVGVAYSFQVFERLPRDAWDIPVDVLVTEKNVRR 111000000000000000000001011221100000000000000 LRDGRSLEHHHHHH 11346789999999 >RIKEN cDNA 1300006M19; SWP:Q9DBJ3; PDB:1SPKA GSSGSSGQKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWL 654321000000000001111100000000000000000000000 YGEHDTTKARGWFPSSYTKLLSGPSSG 000000000000000000000012457 >dh434; SWP:P16117; PDB:1SQ8A MLMGERIRARRIQLGLNQAELAQKVGVDQQAIEQLENGKAKRPRF 100000000000000000000000000000000000000000000 LPELARALGVAVDWLLNGA 0000000000000000001 >50S ribosomal protein L35; SWP:Q8TZV6; PDB:1SQRA MRIKGVVLSYRRSKENQHNNVMIIKPLDVNSREEASKLIGRLVLW 100000000001133343100000000000000000000000000 KSPSGKILKGKIVRVHGTKGAVRARFEKGLPGQALGDYVEIVLEH 011211000000000001000000001111111000000000--- HHHHH ----- >Putative sensor-like hist; SWP:P39838; PDB:1SR2A MQEAVLQLIEVQLAQEEVTESPLGGDENAQLHASGYYALFVDTVP 999999999999999999976432110000000000000000000 DDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPGKQLCETLE 000000000000000000000000000000000000000000000 HLIREKDVPGIEKYISDIDSYVKSLL 00000000000000000000000000 >APO-CCME; SWP:P69490; PDB:1SR3A LRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRD 654322110001111111122222111211110000011111111 PNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGN 211110000000111000000111111111111000011111111 HILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPASHHHHH 000011111122232223344567--------------------- H - >Zinc finger protein ZFPM1; SWP:O35615; PDB:1SRKA GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS 43211000000000000000000000000011246 >PNPASE; SWP:P05055; PDB:1SRO_ AEIEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEK 332110000000000000000000012100000000000111000 VTDYLQMGQEVPVKVLEVDRQGRIRLSIKEA 0000000000000000012332100000014 >Gamma-aminobutyric acid t; SWP:Q9Z0U4; PDB:1SRZA EAEFVRICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHL 865321100000000000000001111100100000000000000 VGSSRSVCSQGQWSTPKPHCQVN 00000000100000000000000 >Pulmonary surfactant-asso; SWP:P07988; PDB:1SSZA CWLCRALIKRIQAMIPKGGRMLPQLVCRLVLRCS 0000000000000000000000000000000001 >Acyl-CoA-binding protein; SWP:P31787; PDB:1ST7A VSQLFEEKAKAVNELPTKPSTDELLELYALYKQATVGDNDKEKPG 000000000000000000000000000000000000000000001 IFNMKDRYKWEAWENLKGKSQEDAEKEYIALVDQLIAKYSS 11110000000000000000000000000000000000001 >Serotransferrin, C-lobe; SWP:P02786; PDB:1SUVE PDPLQDECKAVKWCALGHHERLKCDEWSVTSGGLIECESAETPED 678888898779999999998777666667777889999999999 CIAKIMNGEADAMSLDGGYVYIAGQCGLVPVLAENYESTDCKKAP 999989999999898989999999899775421246632345344 EEGYLSVAVVKKSNPDINWNNLEGKKSCHTAVDRTAGWNIPMGLL 333235668999999999889999999999999989998999999 YNRINHCRFDEFFRQGCAPGSQKNSSLCELCVGPSVCAPNNREGY 999999998999899988899999999775677887567679766 YGYTGAFRCLVEKGDVAFVKSQTVLQNTGGRNSEPWAKDLKEEDF 755466454222124455668889999999999999999999997 ELLCLDGTRKPVSEAHNCHLAKAPNHAVVSRKDKAACVKQKLLDL 799999999999999999999999999999999999999999999 QVEFGNTVADCSSKFCMFHSKTKDLLFRDDTKCLVDLRGKNTYEK 999999999999999999999999999999999999999999999 YLGADYIKAVSNLRKCSTSRLLEACTFHKH 999999999787778999999999999999 >GA repeat binding protein; SWP:Q00422; PDB:1SXDA GSHMAALEGYRKEQERLGIPYDPIHWSTDQVLHWVVWVMKEFSMT 421000000000000000000000000000000000000000001 DIDLTTLNISGRELCSLNQEDFFQRVPRGEILWSHLELLRKYVLA 000000000000000000000000000000000000000000024 S 3 >Transcriptional regulator; SWP:P11308; PDB:1SXEA GSHMEEKHMPPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKE 999865322222112122211100000000000000000000000 YGLPDVNILLFQNIDGKELCKMTKDDFQRLTPSYNADILLSHLHY 000000000000000000000000000000001000000000000 LRETPLP 0000012 >NOXIUSTOXIN; SWP:P08815; PDB:1SXM_ TIINVKCTSPKQCSKPCKELYGSSAGAKCMNGKCKCYNN 000000000000000000000000000000000000001 >F-spondin; SWP:P35446; PDB:1SZLA GSETCIYSNWSPWSACSSSTCEKGKRMRQRMLKAQLDLSVPCPDT 210000000000000000000000000000000000000000000 QDFQPCMGPGCSDEDG 0000000011123567 >cytochrome b5 domain-cont; SWP:NA; PDB:1T0GA MGHHHHHHLEEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKS 666544321000000000000011111000000000000000000 FYGSGGDYSMFAGKDASRALGKMSKNEEDVSPSLEGLTEKEINTL 001111100001000000000000000100011111100000000 NDWETKFEAKYPVVGRVVS 0000000000000000001 >tubulin folding cofactor; SWP:Q20728; PDB:1T0YA GSMTEVYDLEITTNATDFPMEKKYPAGMSLNDLKKKLELVVGTTV --2100000000000010000000000000000000000000000 DSMRIQLFDGDDQLKGELTDGAKSLKDLGVRDGYRIHAVDVTGGN 000000001121000000100000000000000000000001122 EDFKDESMVEKYEMSDDTYGKRTDSVRAWKKK 35------------------------------ >NONSPECIFIC LIPID-TRANSFE; SWP:Q42952; PDB:1T12A AITCGQVTSNLAPCLAYLRNTGPLGRCCGGVKALVNSARTTEDRQ 200000000000000000000000000000000000000000000 IACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV 000000000000000000000000000000001000000001111 Q 2 >conserved hypothetical pr; SWP:Q9A7I7; PDB:1T17A MHRHVVTKVLPYTPDQLFELVGDVDAYPKFVPWITGMRTWNGRVD 100000000000000000000000000111000000000000000 GAVSTVDAEAQVGFSFLREKFATRVRRDKDARSIDVSLLYGPFKR 000000000000000000000000000000000000000001110 LNNGWRFMPEGDATRVEFVIEFAFKSALLDAMLAANVDRAAGKLI 000000000000000000000000000000000000000000000 ACFEARAQQLHGA 0000000000002 >armadillo repeat containi; SWP:Q8VZ40; PDB:1T1HA GSPEFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKT 432212110000000000000000000000000000000000100 CPKSQETLLHAGLTPNYVLKSLIALWCESNGIE 000111011000000000000000000000111 >Kurtoxin; SWP:P58910; PDB:1T1TA KIDGYPVDYWNCKRICWYNNKYCNDLCKGLKADSGYCWGWTLSCY 000000011111110000000000000000000000001110000 CQGLPDNARIKRSGRCRA 000000000011122222 >Chromosomal protein MC1; SWP:P12770; PDB:1T23A SNTRNFVLRDEDGNEHGVFTGKQPRQAALKAANRGSGTKANPDII 210000000000000000000000000000000000000000000 RLRERGTKKVHVFKAWKEIVDAPKNRPAWMPEKISKPFVKKERIE 000111000000000000000000000000000000000000000 KLE 135 >AF-6 protein; SWP:P55196; PDB:1T2MA MKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAA 432100000000010010000000001111000000000000000 DVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAK 000000000000000000000000000000000000000000000 QGALEHHHHHH 112-------- >Dual-specificity tyrosine; SWP:Q8GY31; PDB:1T3KA MGSSHHHHHHSSGLVPRGSHMAMARSISYITSTQLLPLHRRPNIA --------------------2223221111111111222212100 IIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQNVKDKDTLVF 000111112332222111111112211111111111211110000 HSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEAS 122232111100000001011111221111000011111111122 GKPVCRCAEVPCKGDCA 22222223333222256 >Attractin; SWP:O96910; PDB:1T50A DQNCDIGNITSQCQMQHKNCEDANGCDTIIEECKTSMVERCQNQE 421111000000000000110011110000000000000000000 FESAAGSTTLGPQ 1124678899999 >carnobacteriocin B2 immun; SWP:P38582; PDB:1TDPA MDIKSQTLYLNLSEAYKDPEVKANEFLSKLVVQCAGKLTASNSEN 100000000000000000000000000000000000000000000 SYIEVISLLSRGISSYYLSHKRIIPSSMLTIYTQIQKDIKNGNID 000000000000011122333211100000000000000000000 TEKLRKYEIAKGLMSVPYIYF 000000000001111232123 >conserved protein MTH187; SWP:O26289; PDB:1TE4A MGSSHHHHHHSSGLVPRGSHMADENKWVRRDVSTALSRMGDEAFE --------------------9998776567865321222111000 PLLESLSNEDWRIRGAAAWIIGNFQDERAVEPLIKLLEDDSGFVR 000000001000000000000001000000000000000000000 SGAARSLEQIGGERVRAAMEKLAETGTGFARKVAVNYLETH 00000000000000000000000000000000000000011 >Hypothetical UPF0267 prot; SWP:P67603; PDB:1TE7A MQPNDITFFQRFQDDILAGRKTITIRDESESHFKTGDVLRVGRFE 321000000000000000100000000000111000000000011 DDGYFCTIEVTATSTVTLDTLTEKHAEQENMTLTELKKVIADIYP 111100000000000000000000000000000000000000000 GQTQFYVIEFKCL 0000000000001 >TRANSCRIPTIONAL ELONGATIO; SWP:P23193; PDB:1TFI_ KTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGN 764110100000000000000000013544543100000000000 RWKFC 00012 >TOXIN FS2; SWP:P01414; PDB:1TFS_ RICYSHKASLPRATKTCVENTCYKMFIRTHREYISERGCGCPTAM 000011234432100000000000000000000000000100111 WPYQTECCKGDRCNK 100000000000001 >NifU1; SWP:Q84LK7; PDB:1TH5A MLELNEENVEKVLNEIRPYLAGTGGGGLQFLMIKGPIVKVRLTGP 100000000000000000000111110000000000000000000 AAVVRTVRIAVSKKLREKIPSIQIVQLLS 01111000000000000000000000001 >thioredoxin H; SWP:Q8S3L3; PDB:1TI3A AEEGQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIA 100000000000000000000000000000000000000000000 PIFAELAKKFPNVTFLKVDVDELKAVAEEWNVEAMPTFIFLKDGK 000000000000000000000000000000000000000000000 LVDKTVGADKDGLPTLVAKHATA 00000000000000000000001 >plant defensin; SWP:Q6T418; PDB:1TI5A RTCMIKKEGWGKCLIDTTCAHSCKNRGYIGGNCKGMTRTCYCLVN 000000000000000000000000000000000010000000000 C 0 >calmodulin-related protei; SWP:Q9SRP5; PDB:1TIZA SSAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEE 100000000000000000000000000000000000000000000 IDVDGNGELNADEFTSCIEKML 0000000000000000000000 >CG4244-PB; SWP:Q9Y0H4; PDB:1TK7A GSPEFHMDALGPLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQ 999999999999999975446799964235899998745433577 GQEVSLINEGPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPRP 8877877886543332133557775322246787554456668 >Hypothetical protein MG35; SWP:P47596; PDB:1TM9A MEQNNIKEQLISFFNQACSTHQERLDFICSTRESDTFSSVDVPLE 653211000000000001111000000000000111111010000 PIKNIIEITKDENQQIEITKIAVNNIKTLSSVGATGQYMASFFST 000000000000000000000000000000112333200000000 NSEPAIIFCVIYFLYHFGFLKDNNKKQIIKKAYETIADNIADYLN 000000000000000011001122332000000000000000001 EN 34 >TMZIP; SWP:P04692; PDB:1TMZA MDAIKKKMQMLKLDNYHLENEVARLKKLVGER 00000000000000000000000000000011 >MU-TRANSPOSASE; SWP:P07636; PDB:1TNS_ MELWVSPKELANLPGLPKTSAGVIYVAKKQGWQNRTRAGVKGGKA 000000000000000000000000000000000000000000000 IEYNANSLPVEAKAALLLRQGEIETSLGYFE 0000000000000000000000000000000 >CREB-binding protein; SWP:P45481; PDB:1TOTA GQDRFVYTCNECKHHVETRWHCTVCEDYDLCINCYNTKSHTHKMV 000000000000000000000000000000000000000000000 KWGLGLD 0000001 >Neurogenic locus notch ho; SWP:P46531; PDB:1TOZA QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNE 322211111111111111112222221111121111221111111 CVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCL 122222222221111111112222332222222333333444446 HNGRCLDKINEFQCECPTGFTGHLCQ 76543221122234568999999999 >T-PLASMINOGEN ACTIVATOR F; SWP:P00750; PDB:1TPG_ SYQVICRDEKTQMIYQQHQSWLRPVLRSNRVEYCWCNSGRAQCHS 000000000000000000000000000000000000000000000 VPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA 000000000000000000000000000000000000000000000 T 0 >senescence-associated fam; SWP:Q39129; PDB:1TQ1A MGHHHHHHLEAEESRVPSSVSVTVAHDLLLAGHRYLDVRTPEEFS ----------53321000000000000001000000000011111 QGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQ 111111000111357999985323222222221100000000000 SGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA 111011000110011110000000111111122111234 >NECAP1; SWP:Q9CR95; PDB:1TQZA MAAELEYESVLCVKPDVSVYRIPPRASNRGYRASDWKLDQPDWTG 999753210000000000000112333332101100001110000 RLRITSKGKIAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSR 000000000000000001011110000000000000000001110 YFVIRIQDGTGRSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQE 0000000000000000000000000000000000000013457 >TS KAPA; SWP:P56219; PDB:1TSK_ VVIGQRCYRSPDCYSACKKLVGKATGKCTNGRCDC 00000000000000000000000000000000000 >dendritic cell-derived ub; SWP:Q8WUN7; PDB:1TTNA MIEEKSDIETLDIPEPPPNSGYECQLRLRLSTGKDLKLVVRSTDT --------------------5310000000021000000000000 VFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKIPKDYVV 000000000000001100000000000000000000000110000 QVIVSQPVQNPTPVEN 0000112335------ >Oncomodulin; SWP:P32930; PDB:1TTXA MSITDVLSADDIAAALQECRDPDTFEPQKFFQTSGLSKMSANQVK 210000000000000000000000000000000000000000000 DVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAA 000000000000000000000000001100000000000000000 DNDGDGKIGAEEFQEMVHS 0000000000000000001 >RNA polymerase sigma fact; SWP:P77994; PDB:1TTYA KEAMRMLMREELEKVLKTLSPREAMVLRMRYGLLDGKPKTLEEVG 987554321000000000000000000000000000000000000 QYFNVTRERIRQIEVKALRKLRHPSRSKYLKSLLSLMDENEG 000000000000000000001134421000000011122568 >Apocytochrome f; SWP:Q93SW9; PDB:1TU2B YPFWAQQTYPETPREPTGRIVCANCHLAAKPTEVEVPQSVLPDTV 565467999999999999753332432356799999999999999 FKAVVKIPYDTSVQQVGADGSKVGLNVGAVLMLPEGFKIAPEDRI 655665658999777789864124456667999999898999999 PEELKEEIGDVYFQPYGEDKDNIVIVGPLPGEQYQEIVFPVLSPN 998667668999989------------------------------ PANDKNIHFGKYSVHVGGNRGRGQVYPTGEKSNNNLYSAAATGTI --------------------------------------------- SKIAKQEGEDGSVKYLVDIKTESGEVVSDTIPAGPELIVSEGQAV --------------------------------------------- TAGDALTNNPNVGGFGQLDAEIVLQDANR ----------------------------- >odorant binding protein A; SWP:Q9U9J5; PDB:1TUJA IDQDTVVAKYMEYLMPDIMPCADELHISEDIATNIQAAKNGADMS 110000000000000000000001111111112343332111100 QLGCLKACVMKRIEMLKGTELYVEPVYKMIEVVHAGNADDIQLVK 000000000000000001000000000000000000000000000 GIANECIENAKGETDECNIGNKYTDCYIEKLFS 000000000011100000000000000000001 >diacylglycerol kinase alp; SWP:O95217; PDB:1TUZA MAKERGLISPSDFAQLQKYMEYSTKKVSDVLKLFEDGEMAKYVQG 765443110000000000000000000000000000000000001 DAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVT 000000000000000000000000000000001112334434322 KDVVCLNDVSCYFSLLEGGRPEDKLEWS 1000000000000000013579999999 >Cryptdin-4; SWP:P28311; PDB:1TV0A GLLCYCRKGHCKRGERVRGTCGIRFLYCCPRR 32000000000000000000000000000113 >METHANE MONOOXYGENASE COM; SWP:P22868; PDB:1TVCA CRISFGEVGSFEAEVVGLNWVSSNTVQFLLQKRPDECGNRGVKFE 999874321110000010000000000000011334333221221 PGQFMDLTIPGTDVSRSYSPANLPNPEGRLEFLIRVLPEGRFSDY 111000001111111000000111121100000000011110000 LRNDARVGQVLSVKGPLGVFGLKERGMAPRYFVAGGTGLAPVVSM 101111111000000111110001110000000000000000000 VRQMQEWTAPNETRIYFGVNTEPELFYIDELKSLERSMRNLTVKA 000111121100000000000011000010000011110000000 CVWHPSGDWEGEQGSPIDALREDLESSDANPDIYLCGPPGMIDAA 000001000000001100000000111100000000011000000 CELVRSRGIPGEQVFFEKFLPSGAA 0000111111121000000001123 >Hypothetical UPF0054 prot; SWP:Q9X1J7; PDB:1TVIA MGTSHHHHHHSSGRENLYFQGHMIRILGEGKGSKLLENLKEKLEE ----------------------10000000000000000000000 IVKKEIGDVHVNVILVSEDEIKELNQQFRGQDRPTDVLTFPLMEE 000001100000000000000000000000000010000001112 DVYGEIYVCPLIVEENAREFNNTFEKELLEVVIHGILHLAGYDHE 110000000000000000000000000000000000000011332 FEDKNSKEMFEKQKKYVEEVWGEWRSNPSEDSDPGKR 2333311100000000000000000000124568999 >Cofilin; SWP:P21566; PDB:1TVJA MASGVTVNDEVIKVFNDMKVRKSSTPEEIKKRKKAVLFCLSDDKK 421000000000000000000000000000000000000000000 QIIVEEAKQILVGDIGDTVEDPYTAFVKLLPLNDCRYALYDATYE 000000000000000000000000000000000000000000000 TKESKKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKHEW 000000000000000000000000000000000000000000000 QVNGLDDIKDRSTLGEKLGGNVVVSLEGKPL 0000000000000000000000000000000 >PTS system, galactitol-sp; SWP:P0A437; PDB:1TVMA MGSSHHHHHHHHENLYFQGSKRKIIVACGGAVATSTMAAEEIKEL 999999999999999754210000000122221000000000000 CQSHNIPVELIQCRVNEIETYMDGVHLICTTARVDRSFGDIPLVH 000000000000000000000000000000012222211000000 GMPFVSGVGIEALQNKILTILQG 00000000000000000000001 >TRANSACTIVATOR PROTEIN; SWP:NA; PDB:1TVS_ LEDRRIPGTAEENLQKSSGGVPGQNTGGQEARPNYHCQLCFLRSL 999998877888889999999998999889976667654543444 GIDYLDASLRKKNKQRLKAIQQGRQPQYLL 533221233354354345445578999999 >MAUROTOXIN; SWP:P80719; PDB:1TXM_ VSCTGSKDCYAPCRKQTGCPNAKCINKSCKCYGC 0000000000000000000000000000000001 >amyloid beta A4 precursor; SWP:Q02410; PDB:1U39A PPVTTVLIRRPDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHR 210000000000000000000000000000000000000000000 IIEINGQSVVATPHEKIVHILSNAVGEIHMKTMPA 00000000000000000000000000000000000 >prion-like protein; SWP:P27177; PDB:1U3MA GSVVGGLGGYAMGRVMSGMNYHFDRPDEYRWWSENSARYPNRVYY 654443321000000001111111110000000000000100000 RDYSSPVPQDVFVADCFNITVTEYSIGPAAKKNTSEAVAAANQTE 000111000000000000000000000111245445422110000 VEMENKVVTKVIREMCVQQYREYRLAS 000000000000000000000000112 >Huntingtin-associated pro; SWP:P97924; PDB:1U3OA GPLGSPGIPGSTLSGGCELTVVLQDFSAAHSSELSIQVGQTVELL -------------52000000000000000000000000000000 ERPSERPGWCLVRTTERSPPQEGLVPSSTLCISHSRS 00000000000000010000000000000001235-- >Gag polyprotein; SWP:Q70622; PDB:1U57A LEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQR 976545534444343233222221111211211122222344667 KIV 899 >prion protein; SWP:Q9I9C0; PDB:1U5LA GSVVGGLGGYALGSAMSGMRMNFDRPEERQWWNENSNRYPNQVYY 654321111000110011100100000000000012110000000 KEYNDRSVPEGRFVRDCVNITVTEYKIDPNENQNVTQVEVRVMKQ 001111111100000000000000000011111100000000000 VIQEMCMQQYQQYQLASG 00000000000000011- >alpha 1 type II collagen; SWP:P02458; PDB:1U5MA YVEFQEAGSCVQDGQRYNDKDVWKPEPCRICVCDTGTVLCDDIIC 765432210000000000000000000000000000000000011 EDVKDCLSPEIPFGECCPICPADLAAAA 2245678876557531244434568999 >Talin 1; SWP:P26039; PDB:1U89A GSHMQAATEDGQLLRGVGAAATAVTQALNELLQHVKAHATGAGPA 999999986421000000000000000000000000011234442 GRYDQATDTILTVTENIFSSMGDAGEMVRQARILAQATSDLVNAI 210000000000000000000000000000000000000000000 KADAEGESDLENSRKLLSAAKILADATAKMVEAAKGAAAHPDSEE 000001111100000000000000000000000000001358999 QQQR 9999 >Procollagen C-proteinase; SWP:Q15113; PDB:1UAPA MGSSHHHHHHSSGLVPRGSHMLESPDAPTCPKQCRRTGTLQSNFC -----------------------4443332111000000000000 ASSLVVTATVKSMVREPGEGLAVTVSLIGAYKTGGLDLPSPPTGA 000000000000000000000000000000000000000000000 SLKFYVPCKQCPPMKKGVSYLLMGQVEENRGPVLPPESFVVLHRP 000000000000000000000000000000000000000000000 NQDQILTNLSKRKCPSQPV 0000000000000011224 >mouse-musashi-1; SWP:Q61474; PDB:1UAWA CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFG 100000000100000000000000100000000123444321000 FVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 00001110000000000000000000000012 >Ciliary Neurotrophic Fact; SWP:P26992; PDB:1UC6A GPLGSVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLK 655421000000000000000000000000000000111111100 FFLRYRPLILDQWQHVELSNGTAHTITDAYAGKEYIIQVAAKDNE 000000000110000000000000000000000000000000011 IGTWSDWSVAAHATPWTEE 1100000000000000012 >Apoptosis-associated spec; SWP:Q9ULZ3; PDB:1UCPA MGRARDAILDALENLTAEELKKFKLKLLSVPLREGYGRIPRGALL 200000000000000000000000000000000000000000000 SMDALDLTDKLVSFYLETYGAELTANVLRDMGLQEMAGQLQAATH 000000000000000000000000000000000000000000000 Q 2 >EPHRIN TYPE-A RECEPTOR 8; SWP:P29322; PDB:1UCVA GSSGSSGLTVGDWLDSIRMGRYRDHFAAGGYSSLGMVLRMNAQDV 999752000000000000000000000000000000000000000 RALGITLMGHQKKILGSIQTMRAQLTSTQGSGPSSG 000000000000000000000000012468999999 >PROTEIN (UBIQUITIN CORE M; SWP:Q6VZQ1; PDB:1UD7A MQVFLKTLTGKTVTIEVEPSDTVENFKAKIQDKEGIPPDQQRLIF 000000000000000000000000000000000000000000000 AGKQLEDGRTLSDYNIQKESTIHLVLRLRGG 0000000000000000010000000012457 >Nawaprin; SWP:P60589; PDB:1UDKA NEKSGSCPDMSMPIPPLGICKTLCNSDSGCPNVQKCCKNGCGFMT 100000001234555554211000000000000000001221000 CTTPVP 000000 >Coactosin-like protein; SWP:NA; PDB:1UDMA GSEGAATMATKIDKEACRAAYNLVRDDGSAVIWVTFRYDGATIVP 998654320000000000000000001111000000000000000 GDQGADYQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIG 000000000000000000000000000123332210100000000 EDVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIRSE 000000000000000000000000000000000000000000000 LKKAGGANYDAQSE 00002468999999 >Intersectin 2; SWP:Q9NZM3; PDB:1UE9A GSSGSSGEIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQG 986421000000000000111000000000000000000000000 ELQARGKKRQKGWFPASHVKLLGPSSERASGPSSG 00001111000000000000001345789999999 >KIAA1568 Protein; SWP:Q9HCK4; PDB:1UEMA GSSGSSGKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLP 999999998643110000000000000000000000000000000 ASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVR 000000000000000000000000000000000000000000000 AINPQGLSDPSPMSDPVRTQDSGPSSG 000000000000000000000112357 >KIAA0343 protein; SWP:Q92823; PDB:1UENA GSSGSSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRG 999998654311000000000000000000000000000000000 HLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPF 000000000000124444432100000000000000000000000 SHYTLNVRVVNGKGEGPASPDRVFNTPEGSGPSSG 00000000000000000000000000000135679 >Membrane Associated Guany; SWP:Q86UL8; PDB:1UEPA GSSGSSGYKELDVHLRRMESGFGFRILGGDEPGQPILIGAVIAMG 765431000000000000111000000000000000000000010 SADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNL 000000000000000000000000000000000000000000000 TVRRKVLSGPSSG 0000001346789 >MEMBRANE ASSOCIATED GUANY; SWP:Q86UL8; PDB:1UEQA GSSGSSGLFTRDASQLKGTFLSTTLKKSNMGFGFTIIGGDEPDEF 997654210000000010000000000011000000000000000 LQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQ 000000000000000000000000000000000000000000000 SVPIGQSVNLVLCRGYPLPFDPEDPANSGPSSG 000000000000000000011343445689999 >MEMBRANE ASSOCIATED GUANY; SWP:Q86UL8; PDB:1UEWA GSSGSSGSLQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPH 999976432000000000001000000001234577764321000 KIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKD 000000000000001000000000000000000000000000000 AGLSVTLRIIPQEELNSPSGPSSG 010000000012354567899999 >KIAA0343 protein; SWP:Q92823; PDB:1UEYA GSSGSSGPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNS 655444332100000000000000000111100000000000000 PITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLNLSPYVNYSFR 000000000000000000000000000000000000000000000 VMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGPSSG 0000000000000000000000122222134678899 >KIAA1526 Protein; SWP:Q9P202; PDB:1UEZA GSSGSSGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPG 986432100000000124432100000000000000000000000 SLAEKEGLRVGDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVY 000000000000000000000010000000000012110000000 SAGRISGPSSG 01123445567 >KIAA1526 protein; SWP:Q9P202; PDB:1UF1A GSSGSSGDRRSTLHLLQGGDEKKVNLVLGDGRSLGLTIRGGAEYG 999999999999999864210000000001100000000000000 LGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLL 000000000000000000000000000000000000000000000 KSSRHLILTVKDVGRLPHARTTVDETKWIASSSGPSSG 00000000000001246899999999999999999999 >COP9 complex subunit 4; SWP:O88544; PDB:1UFMA GSSGSSGGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAA 999999985320000000000000000000000000000000000 KAEKIASQMITEGRMNGFIDQIDGIVHFETREASGPSSG 000000000000000000000000000000124679999 >putative nuclear protein; SWP:Q8BVK9; PDB:1UFNA GSSGSSGNDAVDFSPTLPVTCGKAKGTLFQEKLKQGASKKCIQNE 999999876544300000000000000000000000000000000 AGDWLTVKEFLNEGGRATSKDWKGVIRCNGETLRHLEQKGLLFSG 000000000000000000000000000000000000000000000 PSSG 1235 >Synaptojanin 2; SWP:O15056; PDB:1UFWA GSSGSSGSSFQGPLDATVVVNLQSPTLEEKNEFPEDLRTELMQTL 866545543323222110000011111111110011000000000 GSYGTIVLVRINQGQMLVTFADSHSALSVLDVDGMKVKGRAVKIS 011111110000100000111111111111111111111111011 GPSSG 12357 >KIAA1526 protein; SWP:Q9P202; PDB:1UFXA GSSGSSGTLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGGSA 975310000000000000000000000000000000000000000 HNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYID 001000000000000000000000000000000000000000000 FLVTEFNSGPSSG 0000001345678 >Hypothetical protein BAB2; SWP:Q69ZS7; PDB:1UFZA GSSGSSGEYGYEDLRESSNSLLNHQLSEIDQARLYSCLDHMREVL 999999999977765544455444545554443333222212322 GDAVPDDILTEAILKHKFDVQKALSVVLEQDGSGPSSG 34433222111122233322321232223345566899 >splicing factor 4; SWP:Q8CH02; PDB:1UG0A GSSGSSGEEDYEQWLEIKVSPPEGAETRRVIEKLARFVAEGGPEL 999754300000000000000000010000000000000000000 EKVAMEDYKDNPAFTFLHDKNSREFLYYRRKVAEIRKSGPSSG 0000000000000000000101000000000000000245789 >KIAA1010 protein; SWP:Q6XZF7; PDB:1UG1A GSSGSSGASLLARYPPEKLFQAERNFNAAQDLDVSLLEGDLVGVI 310000000000000000000000000000000000000000000 KKKDPMGSQNRWLIDNGVTKGFVYSSFLKPYNPRRSHSDASSGPS 000001000000000000000000000000000135799999999 SG 99 >2610208M17Rik protein; SWP:NA; PDB:1UG7A GSSGSSGMSEVTRSLLQRWGASLRRGADFDSWGQLVEAIDEYQIL 998754311000000000000000000000000000000000000 ARHLQKEAQAQHNNSEFTEEQKKTIGKIATCLELRSAALQSTQSQ 000000000133210000000000000000000000000001221 EEFKLEDLKKLEPILKNILTYNKEFPFDVQPISGPSSG 10000000000000000000010000000000124568 >Poly(A)-specific Ribonucl; SWP:Q8VDG3; PDB:1UG8A GSSGSSGDQKKFIDQVIEKIEDFLQSEEKRSLELDPCTGFQRKLI 531000000000000000000000000000000000000000000 YQTLSWKYPKGIHVETLETDKKERHIVISKVDEEERSGPSSG 000000000000000000001100000000000111233556 >RIKEN cDNA 2310057J16 pro; SWP:Q80VC9; PDB:1UGJA GSSGSSGPRLYKEPSAKSNKFIIHNALSHCCLAGKVNEPQKNRIL 999999999998654210000000000000000000000000000 EEIEKSKANHFLILFRDSSCQFRALYTLSGETEELSRLAGYGPRT 000000000000000001210000000000000000000000000 VTPAMVEGIYKYNSDRKRFTQIPAKTMSMSVDAFTIQGHLWQSKK 000000000000000000000000000000000000000001132 SGPSSG 334445 >Synaptotagmin IV; SWP:Q9H2B2; PDB:1UGKA GSSGSSGLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSD 655421000000000000000000000000000000001110000 PYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQEL 000000000000000000000000000000000000000000000 ALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIISGP 000000000122210000000000000000000000000000000 SSG 135 >S-locus pollen protein; SWP:Q9SE17; PDB:1UGLA NLMKRCTRGFRKLGKCTTLEEEKCKTLYPRGQCTCSDSKMNTHSC 531100000000000000000000000000100000000000000 DCKSC 00001 >Bcl2-associated athanogen; SWP:NA; PDB:1UGOA GSSGSSGMDMGNQHPSISRLQEIQREVKAIEPQVVGFSGLSDDKN 999997654321100000000000000000000000000001110 YKRLERILTKQLFEIDSVDTEGKGDIQQARKRAAQETERLLKELE 000000000000000000000010000000000000000000000 QNASGPSSG 000012568 >Olygophrenin-1 like prote; SWP:Q9UNA1; PDB:1UGVA GSSGSSGTPFRKAKALYACKAEHDSELSFTAGTVFDNVHPSQEPG 999976421000000000000111000000000000000000000 WLEGTLNGKTGLIPENYVEFLSGPSSG 000000000000000000000124689 >KIAA1010 protein; SWP:Q6XZF7; PDB:1UHCA GSSGSSGSEAEGNQVYFAVYTFKARNPNELSVSANQKLKILEFKD 999998876543100000000000000000000000000000000 VTGNTEWWLAEVNGKKGYVPSNYIRKTESGPSSG 0100000000000000000000000002357899 >INTERSECTIN 2; SWP:Q9NZM3; PDB:1UHFA GSSGSSGGEEYIALYPYSSVEPGDLTFTEGEEILVTQKDGEWWTG 998643100000000000000100000000000000000000000 SIGDRSGIFPSNYVKPKDSGPSSG 000000000000000000246799 >hypothetical protein KIAA; SWP:Q9UPQ7; PDB:1UHPA GSSGSSGKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFV 997531000000000000000000000112456666543100000 SKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKTAK 000000000000000000000000000000000000000000000 EPIVVQVLRRTSGPSSG 00000000002346689 >SWI/SNF related, matrix a; SWP:Q61466; PDB:1UHRA GSSGSSGQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKL 765432100000000000000000000000000000000000000 QDPHEREFVLCDKYLQQIFESQRMKFSEIPQRLHALLMPPEPSGP 000000000000000000000000000000000000000013579 SSG 999 >expressed protein; SWP:NA; PDB:1UHTA GSSGSSGMVTPSLRLVFVKGPREGDALDYKPGSTIRVGRIVRGNE 997543211000000000000000000000000000000000000 IAIKDAGISTKHLRIESDSGNWVIQDLGSSNGTLLNSNALDPETS 000000000000000000100000000001000000000000000 VNLGDGDVIKLGEYTSILVNFVSGPSSG 0000000000000000000000023568 >product of RIKEN cDNA 311; SWP:NA; PDB:1UHUA GSSGSSGTPLSLTLDHWSEIRSRAHNLSVEIKKGPWRTFCASEWP 986432000000000000000000000000000000000000000 TFDVGWPPEGTFDLTVIFEVKAIVFQDGPGSHPDQQPYITVWQDL 000000000000000000000000000010000000000000000 VQNSPPWIKSGPSSG 000000001235789 >Pleckstrin; SWP:Q9JHK5; PDB:1UHWA GSSGSSGLGALYLSMKDPEKGIKELNLEKDKKVFNHCLTGSGVID 311111000000000000000000000011100000000000000 WLVSNKLVRNRQEGLMISASLLSEGYLQPAGDLSKNAADGIAENP 000000000000000000000000000000000000000000000 FLDSPDAFYYFPDSGPSSG 0000000000000001235 >staufen (RNA binding prot; SWP:Q8CJ67; PDB:1UHZA GSSGSSGPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVK 433211000000000000000000000000001011100000000 VGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTSLQDSGPSSG 00000000000000000000000000000000000000012245 >Double-stranded RNA-bindi; SWP:O70133; PDB:1UILA GSSGSSGLESEEVDLNAGLHGNWTLENAKARLNQYFQKEKIQGEY 999999998755322111100000000000000000000000000 KYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCA 000000000000000000000000000000000000000000000 LSLVRQLYHLGVIEAYSSGPSSG 00000000000000001123457 >HUMAN DISCS LARGE 5 PROTE; SWP:Q8TDM6; PDB:1UITA GSSGSSGGERRKDRPYVEEPRHVKVQKGSEPLGISIVSGEKGGIY 999999998766432100000000000000000000000111000 VSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQC 000000000000000000000000000000000000000000000 DTITILAQYNPHVHQLSSHSRSGPSSG 000000000000012345678999999 >KIAA0559 protein; SWP:Q9Y6V0; PDB:1UJDA GSSGSSGHYIFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGH 986543210000000000012345666543210000000000011 SGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEV 100000000000110000000000000000000000000000000 QSIISQQSGEAEICVRLDLNMSGPSSG 000001111000000000101134567 >Transgelin; SWP:P37804; PDB:1UJOA GSSGSSGEELEERLVEWIVVQCGPDVGRPDRGRLGFQVWLKNGVI 999753100000000000000000000001122100000000000 LSKLVNSLYPEGSKPVKVPENPPSMVFKQMEQVAQFLKAAEDYGV 000000000011100000010000000000000000000000000 IKTDMFQTVDLYEGKDMAAVQRTLMALGSLAVTKNDGNYRGDPNW 000000000000000000000000000000000011100000000 FMKSGPSSG 113457778 >hypothetical protein AK01; SWP:Q9CZW6; PDB:1UJRA PSSGSSGFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDE 999999999999999987654432233332211122333222222 RTSRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRR 211211111112111112223332221111111111223222211 KIKRDIIDIPKKGVSGPSSG 11122335899999999999 >actin-binding LIM protein; SWP:O94929; PDB:1UJSA GSSGSSGNAVNWGMREYKIYPYELLLVTTRGRNRLPKDVDRTRLE 887654210000000000000000000001010000000000000 RHLSQEEFYQVFGMTISEFDRLALWKRNELKKQARLFSGPSSG 0000000000000000000000000000000000000001235 >KIAA1568 protein; SWP:Q9HCK4; PDB:1UJTA GSSGSSGRQVQKELGDVLVRLHNPVVLTPTTVQVTWTVDRQPQFI 976532100000000000000100000000000000000000000 QGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEI 000000000000000000000000000000000000000000000 KVRPYFNEFQGMDSESKTVRTTEESGPSSG 000000000000000000000001245679 >scribble; SWP:Q14160; PDB:1UJUA GSSGSSGPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEG 987643100000000000000000000000011111122111000 IFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLR 000000000000000000000000000000000000000000000 SVGDTLTVLVCDGFESGPSSG 000000000000001123579 >MEMBRANE ASSOCIATED GUANY; SWP:Q86UL8; PDB:1UJVA GSSGSSGQAELMTLTIVKGAQGFGFTIADSPTGQRVKQILDIQGC 999986532100000000101100000000000000000000000 PGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRG 000000000000000000000000000000000000000000001 SGPSSG 235689 >Rho guanine nucleotide ex; SWP:Q15052; PDB:1UJYA GSSGSSGSHQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGW 988765321000000000000000000000000000000000000 WEGTLNGRTGWFPSNYVREIKSSERSGPSSG 0000000000000000000000000011368 >BAG-family molecular chap; SWP:Q9JLV1; PDB:1UK5A GSSGSSGAPAEPAAPKSGEAETPPKHPGVLKVEAILEKVQGLEQA 999999999999876665544321000000000000000000000 VDSFEGKKTDKKYLMIEEYLTKELLALDSVDPEGRADVRQARRDG 000000000000000000000000000000000000000000000 VRKVQTILEKLEQKASGPSSG 000000000000000012457 >GCN2 eIF2alpha kinase; SWP:Q9QZ05; PDB:1UKXA GSSGSSGMESYSQRQDHELQALEAIYGSDFQDLRPDARGRVREPP 999999643100000000000000000000000122333221000 EINLVLYPQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKNAKGL 000000000111110000000000000000000000000000000 SNESVNLLKSHLEELAKKQCGEVMIFELAHHVQSFLSEHNKSGPS 100000000000000000000000000000000000000012456 SG 79 >MAP/microtubule affinity-; SWP:Q03141; PDB:1UL7A GSSGSSGRFTWSMKTTSSMDPSDMMREIRKVLGANNCDYEQRERF 999987643221110000000000000000000000000000000 LLFCVHGDGHAENLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFK 000000000000000000000000111100000000000000000 NIASKIANELKL 000000000000 >KIAA1849 protein; SWP:Q96JH8; PDB:1UM1A GSSGSSGYVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLP 976431000000000000000000000000000000000000000 GSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGGKKMRF 000000000000000000000000110000000000000100000 LVAKSDVETAKKIHSGPSSG 00000000000000124679 >synapse-associated protei; SWP:Q92796; PDB:1UM7A GSSGSSGRPGGDAREPRKIILHKGSTGLGFNIVGGEDGEGIFVSF 999987655321000000000000110000000000000000000 ILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQS 000000000000000000000000000000000000000000000 VTIVAQYRPEEYSRFESSGPSSG 00000000000000000135568 >PHOTOSYNTHETIC APPARATUS; SWP:Q53228; PDB:1UMQA MGSSHHHHHHSSGLVPRGSHMLAKGESLPPPPENPMSADRVRWEH ---------------------999999999976431100000000 IQRIYEMCDRNVSETARRLNMHRRTLQRILAKRSPR 000000000000000000000000000000000245 >VILLIN 1; SWP:P09327; PDB:1UNCA LSIEDFTQAFGMTPAAFSALPRWKQQNLKKEKGLF 10000000000000000000000000000000001 >ADVILLIN; SWP:O75366; PDB:1UNDA YLSEQDFVSVFGITRGQFAALPGWKQLQMKKEKGLF 100000000000000000000000000000000001 >STE50 PROTEIN; SWP:P25344; PDB:1UQVA GSHMNNEDFSQWSVDDVITWCISTLEVEETDPLCQRLRENDIVGD 986532111100000000000000000000000000000000000 LLPELCLQDCQDLCDGDLNKAIKFKILINKMRDSKLEWKD 0000000000000000000000000000000001346799 >PROTEIN KINASE C-LIKE 1; SWP:Q16512; PDB:1URFA GIPATNLSRVAGLEKQLAIELKVKQGAENMIQTYSNGSTKDRKLL 854321110000000000000000000000000011221110000 LTAQQMLQDSKTKIDIIRMQLRRALQADQLENQAAP 000000000000000000000000001113468999 >HISTONE H1; SWP:P53551; PDB:1USSA KASSPSSLTYKEMILKSMPQLNDGKGSSRIVLKKYVKDTFSSKLK 999643110000000000001122110000000000000000101 TSSNFDYLFNSAIKKCVENGELVQPKGPSGIIKLNKKKVKLST 1210000000000000000000001122110000012468999 >HISTONE H1; SWP:P53551; PDB:1USTA KKEEASSKSYRELIIEGLTALKERKGSSRPALKKFIKENYPIVGS -53211000000000000000000100000000000000000000 ASNFDLYFNNAIKKGVEAGDFEQPKGPAGAVKLAKKKSPEVKKEK 010000000000000000000000101000000012334446777 EVS 768 >SPHENISCIN-2; SWP:P83430; PDB:1UT3A SFGLCRLRRGFCARGRCRFPSIPIGRCSRFVQCCRRVW 32332222110000111210000000010000000001 >CELL DIVISION PROTEIN FTS; SWP:P29131; PDB:1UTAA FTSNKDERRWMVQCGSFRGAEQAETVRAQLAFEGFDSKITTNNGW ----65310000011000000000000000000000000001000 NRVVIGPVKGKENADSTLNRLKMAGHTNCIRLAAGG 000000001110000000000000000100000124 >BOVINE PANCREATIC TRYPSIN; SWP:P00974; PDB:1UUBA DFCLEPPYTGPCRAAIIRYFYNAKAGLCQTFVYGGCRAKSNNFKS 100001001211111000000000110000000111000000000 AEDCMRTCGGA 00000000023 >SERINE PROTEINASE INHIBIT; SWP:Q9NQ38; PDB:1UVGA GPDSEMCKDYRVLPRIGYLCPKDLKPVCGDDGQTYNNPCMLCHEN --3343344444556544444554332223333223222211111 LIRQTNTHIRSTGKCEESSTPGTTAASMPPSDE 233332222333334445445444556689999 >DNA LIGASE III; SWP:P49916; PDB:1UW0A MAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIGKVVPNPFSESGG 531000000001110000111100000000000000012223321 DMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQI 000000000000000001122110000010110001100000000 TQHIADLSSKAAGTPKKKAVVQAKLTT 000000011246899999999999999 >U1 SMALL NUCLEAR RIBONUCL; SWP:P09234; PDB:1UW2A MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQ 421000000000011101000000000000000000000011111 AQSLIDKTTAAFQQGK 1110000011123346 >HYPOTHETICAL PROTEIN TM04; SWP:Q9WYV7; PDB:1UWDA PMSKKVTKEDVLNALKNVIDFELGLDVVSLGLVYDIQIDDQNNVK -42100000000000000001110000000010000000000000 VLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTFDPPWTP 000000001000000000000000000000000000000000000 ERMSPELREKFGV 0000000000111 >FRUCTOSE REPRESSOR; SWP:P0ACP1; PDB:1UXC_ MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREH 000000000000000000000000000000000000000000000 NYHPN 00000 >HYPOTHETICAL PROTEIN FLJ2; SWP:O75400; PDB:1UZCA GSQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIIN --7642100000000000000000000000000000000000000 DPRYSALAKLSEKKQAFNAYKVQTEK 00000000000000000000000013 >HBP1; SWP:Q8R316; PDB:1V06A GAMAPSTIWHCFLKGTRLCFHKESNKEWQDVEDFARAASCDNEEE ----00000000000000000001110000000000001223456 IQMGTHKGYGSDGLKLLSHEESVSFGESVLKLTFDPGTVEDGLLT 554321100000000000000000000000000000000000000 VECKLDHPFYVKNKGWSSFYPSLTVVQHGIPCCEIHIGDVCLPPG 000000000000000000000000000000000000000000000 HPDAINF 0000000 >OBSCURIN; SWP:Q5VST9; PDB:1V1CA GSSIFDIYVVTADYLPLGAEQDAITLREGQYVEVLDAAHPLRWLV ---100000000100011111000000000000000110000000 RTKPTKSSPSRQGWVSPAYLDRRLKL 00001111000000000000000013 >Regulating synaptic membr; SWP:Q9UQ26; PDB:1V27A GSSGSSGGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPY 543221000000000000000000000000000011222100000 VKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRER 000000000110000000000000000000000000000000000 MLEITLWDQARVREEESEFLGEILIELETALLDDEPHWYKLQTHD 000000000012332111000000000000000000000000022 SGPSSG 445568 >3300001G02Rik protein; SWP:Q8VIK1; PDB:1V2YA GSSGSSGMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQ 654210000000001110000000000000000000000000000 EREGGVQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 001111221000000000000110000000000000000000000 SFIKKLGQKSGPSSG 000001234567899 >hypothetical protein RAFL; SWP:Q9FMT4; PDB:1V31A GSSGSSGVPEKFKLSTALMDVLGIEVETRPRIIAAIWHYVKARKL 998754321000000000000000000000000000000000000 QNPNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLSPPPPSGP 000000000001000000000000000000000000000001246 SSG 899 >hypothetical protein RAFL; SWP:Q9FT92; PDB:1V32A GSSGSSGKRFEFVGWGSRQLIEFLHSLGKDTSEMISRYDVSDTIA 999999864210000000000000000000000000000000000 KYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDLLEKHY 000000000000000000000000000000000000000000000 KENQDSGPSSG 11356789999 >SAM-domain protein SAMSN-; SWP:P57725; PDB:1V38A GSSGSSGRRENHQTIQEFLERIHLQEYTSTLLLNGYETLDDLKDI 999999853200000000000000000000000000000000000 KESHLIELNIADPEDRARLLSAAESLLSGPSSG 000000000000000000000000000136899 >Pleckstrin 2; SWP:Q9WV52; PDB:1V3FA GSSGSSGLHRIVDKMHDTSTGIRPSPNMEQGSTYKKTFLGSSLVD 532211000000000000000000111222211110000000000 WLISSNFAASRLEAVTLASMLMEENFLRPVGVRSMGAIRSGDLAE 000000000000000000000000000000111112111221111 QFLDDSTALYTFAESYKKKVSSKESGPSSG 000000000000011234679999999999 >Transcriptional Repressor; SWP:NA; PDB:1V4RA GPMPYKAPEGKGYADVATHFRTLIKSGELAPGDTLPSVADIRAQF --5543334433232122213323443223332111222212221 GVAAKTVSRALAVLKSEGLVSSRGALGTVVEKNPIVITGADRLKR 222222122223333433333334432222454445443456799 MEKNGMRYAPGE 999999999999 >Spinoxin; SWP:P84094; PDB:1V56A IRCSGSRDCYSPCMKQTGCPNAKCINKSCKCYGC 0000000000000000000000000000000000 >KIAA1355 protein; SWP:Q9P2J2; PDB:1V5JA GSSGSSGLSPPRGLVAVRTPRGVLLHWDPPELVPKRLDGYVLEGR 545421000000000000000000000000000000000000000 QGSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVAFAGSFVSD 000000000000000000000000000000000000000000000 PSNTANVSTSGLSGPSSG 000000000012345679 >microtubule-associated pr; SWP:Q61166; PDB:1V5KA GSSGSSGQRRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLF 987655321000000000000000000000000000000000000 PGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLV 000000000000000000000000000000000000000000000 KGKFQDNFEFVQWFKKFFDSGPSSG 0010000000000000000135689 >PDZ and LIM domain 3; act; SWP:NA; PDB:1V5LA GSSGSSGNVVLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAA 754210000000000000000000000000000000000000000 NLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETR 000000000000000000000000000000000000000001112 LWSPQVSSGPSSG 3444432357899 >SH2 and PH domain-contain; SWP:Q9JID9; PDB:1V5MA GSSGSSGNLAAKVELVDIQREGALRFMVADDAASGPGGTAQWQKC 999999999764321000000000000000123334333200000 RLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSAIIEVRTTMPLE 000000011100000000000000000000000000000001121 MPEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVDSGPSS 111100000000000000000000000000000000000113557 G 8 >PDI-like Hypothetical Pro; SWP:O80763; PDB:1V5NA GSSGSSGTEERLKEIEAKYDEIAKDWPKKVKHVLHEEHELELTRV 999865432210000000000000000000000000000000000 QVYTCDKCEEEGTIWSYHCDECDFDLHAKCALNEDTKESGPSSG 00000000000000000000000000000000012345679999 >1700011N24Rik protein; SWP:NA; PDB:1V5OA GSSGSSGMLITVYCVRRDLTEVTFSLQVNPDFELSNFRVLCELES 765421000000000000000000000000000000000000000 GVPAEEAQIVYMEQLLTDDHCSLGSYGLKDGDMVVLLQKDNVGLR 000000000000000000000000000000000000000122344 TPGRTPSGPSSG 567899999999 >pleckstrin homology domai; SWP:NA; PDB:1V5PA GSSGSSGMPYVDRQNRICGFLDIEDNENSGKFLRRYFILDTQANC 999999999985431000000000011110000000000000000 LLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFV 000000000000110000000000000000000100001000000 INALSQRYFLQANDQKDLKDWVEALNQASKSGPSSG 000000000000000000000000000001346789 >Growth-arrest-specific pr; SWP:P11862; PDB:1V5RA GSSGSSGNLLDDAVKRISEDPPCKCPTKFCVERLSQGRYRVGEKI 876543100000000000000000000000000001000000000 LFIRMLHNKHVMVRVGGGWETFAGYLLKHDPCRMLQISRVDGKTS 000000000000000110000000000000000001234455678 PSGPSSG 9999999 >MAP/microtubule affinity-; SWP:Q03141; PDB:1V5SA MKDHLIHNVHKEEHAHAHNKDYDIPTTENLYFQGSSGSSGDMMRE 999999999999999999876543221000000000000000000 IRKVLGANNCDYEQRERFLLFCVHGDGHAENLVQWEMEVCKLPRL 000000000000000000000000011011000000000011233 SLNGVRFKRISGTSIAFKNIASKIANELKLSGPSSG 211000000000000000000000000000001124 >8430435I17Rik Protein; SWP:NA; PDB:1V5TA GSSGSSGLPIIVKWGGQEYSVTTLSEDDTVLDLKQFLKTLTGVLP 865321000000000000000000000000000000000000000 ERQKLLGLKVKGKPAENDVKLGALKLKPNTKIMMMGTRESGPSSG 000000000000000000000000000000000000000123457 >SET binding factor 1; SWP:Q8BK68; PDB:1V5UA GSSGSSGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRM 766665310000000001232100000000000000000000011 DTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTTRRVYN 110000000000000000000000001000000000000000000 FCAQDVPSAQQWVDRIQSCLSSGPSSG 000000000000000000001247899 >RIKEN cDNA 1810037G04; SWP:Q9D8S9; PDB:1V60A GSSGSSGMATRSCVSRGSAGSAAAGPVEAAIRAKLEQALSPEVLE 999999999999999999865310000000000000000000000 LRNESGGHAVPAGSETHFRVAVVSSRFEGMSPLQRHRLVHEALSE 000011211111100000000000000000000000000000000 ELAGPVHALAIQAKTPAQWRENPQLDISPPCLG 000000000000000000000000000123468 >Rac/Cdc42 guanine nucleot; SWP:Q8K4I3; PDB:1V61A GSSGSSGQILSEPIQAWEGDDIKTLGNVIFMSQVVMQHGACEEKE 987765531211000001110000000000000000012221100 ERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAGMVVNRLDEIEGS 000000000000000012221000000000000000001133443 DCMFEITGSTVERIVVHCNNNQDFQEWMEQLNRLTKSGPSSG 210000011111000000210000000000000001355689 >KIAA1719 protein; SWP:Q9C0E4; PDB:1V62A GSSGSSGDTVANASGPLMVEIVKTPGSALGISLTTTSLRNKSVIT 999999998754210000000000000000000000001000000 IDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASI 000000000000000000000000000000000000000000000 SEKVRLEILPVPQSQRPLRPSSGPSSG 000000000000010111346899999 >Nucleolar transcription f; SWP:P25976; PDB:1V63A GSSGSSGPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRW 865432100000110000000000000000000000000000000 QRISQSQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYI 000000000000000000000000000000000000000000000 SNKRKSGPSSG 11113457899 >Nucleolar transcription f; SWP:P25976; PDB:1V64A GSSGSSGQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERM 999987655432210000000000000000000000000000000 VLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQ 000000000000000000000000000000000000000000000 QRVLGEEKMLNISGPSSG 000000001112457899 >Protein inhibitor of acti; SWP:O75925; PDB:1V66A MADSAELKQMVMSLRVSELQVLLGYAGRNKHGRKHELLTKALHLL 211000000000000000000000000000000000000000000 KAGCSPAVQMKIKELYRRRF 00000000000000000001 >harmonin isoform a1; SWP:Q9ES64; PDB:1V6BA GSEGAATMFSPEQIAGKDVRLLRIKKEGSLDLALEGGVDSPVGKV 864211000011001100000000000100000000000000000 VVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQK 000000010000000010000000000000000000000000000 AWNQGGDWIDLVVAVCPPKEYDDELTFF 0000000000000001123346899999 >cytoskeleton-associated p; SWP:Q9D1E6; PDB:1V6EA GSSGSSGVMVFISSSLNSFRSEKRYSRSLTIAEFKCKLELVVGSP 986431000000000001000000000000000000000000000 ASCMELELYGADDKFYSKLDQEDALLGSYPVDDGCRIHVIDHSGS 000000000001000000000000000000000000000000013 GPSSG 56678 >glia maturation factor, b; SWP:NA; PDB:1V6FA GSSGSSGSESLVVCDVAEDLVEKLRKFRFRKETHNAAIIMKIDKD 999987532100000000000000000000000000000000000 ERLVVLDEELEGVSPDELKDELPERQPRFIVYSYKYQHDDGRVSY 000000000000000000000000000000000000000000000 PLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELTKVFEIRNTEDL 000000000000000000000000000000000000000000000 TEEWLREKLGSGPSSG 0000000000124458 >Actin Binding LIM Protein; SWP:Q6H8Q1; PDB:1V6GA GSSGSSGLDYQRLYGTRCFSCDQFIEGEVVSALGKTYHPDCFVCA 999864221111110000000000001000000000000000000 VCRLPFPPGDRVTFNGKECMCQKCSLPVSVSGPSSG 000000111000000000000000000122346788 >Phrixotoxin 1; SWP:P61230; PDB:1V7FA YCQKWMWTCDSARKCCEGLVCRLWCKKII 21000000011110001000000000013 >similar to ring finger pr; SWP:Q8R079; PDB:1V85A GSSGSSGEHGLLVHKAVDKWTTEEVVLWLEQLGPWASLYRDRFLS 987532110000000000000000000000000000000000000 ERVNGRLLLTLTEEEFSRAPYTIENSSHRRVILTELERVRSGPSS 000000000000000000000000000000000000000012246 G 8 >DNA segment, Chr 7, Wayne; SWP:Q9CYA9; PDB:1V86A GSSGSSGDAGGGVGKELVDLKIIWNKTKHDVKVPLDSTGSELKQK 999999887665421000000000000000000000000000000 IHSITGLPPAMQKVMYKGLVPEDKTLREIKVTSGAKIMVVGSTIS 000000000000000000000000000000000000000001234 GPSSG 55566 >Deltex protein 2; SWP:Q8R3P2; PDB:1V87A GSSGSSGEPEQVIRKYTEELKVAPEEDCIICMEKLAVASGYSDMT 998642100000000000000000000000000000000000000 DSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKT 000000000000000000000000000000001010000000000 IYGEKTGTQPWGKMEVFRSGPSSG 001124555579999999999999 >Oxysterol binding protein; SWP:Q9BZF1; PDB:1V88A GSSGSSGIVMADWLKIRGTLKSWTKLWCVLKPGVLLIYKTQKNGQ 975321000000000001111000000000000000000000000 WVGTVLLNACEIIERPSKKDGFCFKLFHPLEQSIWAVKGPKGEAV 000000000000000001100000000000000000000000000 GSITQPLPSSYLIIRATSESDGRCWMDALELALKSGPSSG 0000000000000000000000000000000000136567 >Hypothetical protein KIAA; SWP:P42331; PDB:1V89A GSSGSSGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDT 764321000000000000111000000000000000000000000 KPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSY 000000000000000001222221000000000113456542100 VLMASSQAEMEEWVKFLRRVAGSGPSSG 0000000000000000000001357899 >Delta-palutoxin IT2; SWP:P83257; PDB:1V91A ACVGDGQRCASWSGPYCCDGYYCSCRSMPYCRCRNNS 1000000000000000000000000000000000000 >NSFL1 cofactor p47; SWP:O35987; PDB:1V92A MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDG 100000000000000000000000000000000000000000124 G 5 >Nuclear receptor coactiva; SWP:Q9HCD5; PDB:1V95A GSSGSSGPVDCSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFLNT 997543100000000000000000000000000000000000011 EVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMFGTPQEHR 100000000000000000000000000000000000000000000 NMPQADAMVLVARNYERYKNECREKEREEIARQASGPSSG 0000000000000000000001113467999999999999 >KIAA0561 protein; SWP:O60307; PDB:1V9VA GSSGSSGPKATAQMEGRLQEFLTAYAPGARLALADGVLGFIHHQI 999755422200000000000000000000000000000000000 VELARDCLAKSGENLVTSRYFLEMQEKLERLLQDAHERSDSEEVS 000000000000000000000000000000000000000000000 FIVQLVRKLLIIISRPARSGPSSG 000000000000000012457799 >putative 42-9-9 protein; SWP:NA; PDB:1V9WA GSEGAATMATFEEVSVLGFEEFDKAVKEHESKTIFAYFSGSKDTE 887643100000000000000000000000000000000000011 GKSWCPDCVEAEPVIREGLKHVTEDCVFIYCQVGDKPYWKDPNND 000000000000000000000000000000000000000000000 FRQKLKITAVPTLLKYGTPQKLVESECCQSSLVEMIFSED 0000000000000000000000000000000000000002 >poly (ADP-ribose) polymer; SWP:NA; PDB:1V9XA GSSGSSGHKPWRAEYAKSSRSSCKTCKSVINKENFRLGKLVQSTH 876432100000000000000000000000000000000000012 FDGIMPMWNHASCILKKTKQIKSVDDVEGIESLRWEDQQKIRKYV 221000000000000000000000000000000000000000000 ESGAGSNTSTSTGTSTSSSGPSSG 001247999999999999999999 >Transcription factor Sp1; SWP:P08047; PDB:1VA1A MDPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER -997431000000110000000000000000000224 >MAGUK p55 subfamily membe; SWP:Q9JLB2; PDB:1VA8A GSSGSSGPITDERVYESIGHYGGETVKIVRIEKARDIPLGATVRN 999999999865443211110100000000000000000000000 EMDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVF 000000000000000000000000000000000000000000000 DLLSDMHGTLTFVLIPSSGPSSG 00000000000000000123456 >Down syndrome cell adhesi; SWP:Q8TD84; PDB:1VA9A GSSGSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQN 999987653210000000000000000000000000000000000 GVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQ 000000000000001211100000000000000000000000000 YGVVVQAFNRAGTGPSSSEINATTLESGPSSG 00000000000000000000000000123345 >rhophilin, Rho GTPase bin; SWP:Q8BWR8; PDB:1VAEA GSSGSSGSASKRWSPPRGIHFTVEEGDLGFTLRGNTPVQVHFLDP 999876542100000000000000000100000000000000000 HCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEM 000000000000000000000000000000000000000000000 KVVSLLDSTSSMHNKSGPSSG 000000123355689999999 >NSFL1 cofactor p47; SWP:O35987; PDB:1VAZA MRGSHHHHHHGSERRRHSGQDVHVVLKLWKTGFSLDNGDLRSYQD ------------999985321000000000000000000000000 PSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKP 0000000000001111000000001000000000011111235 >PDZ and LIM domain 2; SWP:NA; PDB:1VB7A GSSGSSGLTVDVAGPAPWGFRISGGRDFHTPIIVTKVTERGKAEA 865321000000000000000000000000000000000000000 ADLRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLDRSSG 000000000000000000000000000000000000000000012 PSSG 3456 >Vesicle transport through; SWP:O89116; PDB:1VCSA GSSGSSGEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEK 876543210000000000000000000000000000000000000 QLEEARELLEQMDLEVREIPPQSRGMYSNRMRSYKQEMGKLETDF 000000000000000000000001100000000000000000000 KRSRIASGPSSG 000001235578 >Protein kinase C, iota ty; SWP:P41743; PDB:1VD2A GPLGSQVRVKAYYRGDIMITHFEPSISFEGLCNEVRDMCSFDNEQ 764210000000000000000000000000000000000000000 LFTMKWIDEEGDPCTVSSQLELEEAFRLYELNKDSELLIHVFPC 00000000000000000000000000000011221000000001 >Transcription initiation; SWP:P29083; PDB:1VD4A RIETDERDSTNRASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFC 999999986541000000000000000000000000000000000 HTEVEEDESAMPKKDAR 00000000113467999 >Troponin I, fast skeletal; SWP:P68246; PDB:1VDIA KVNMDLRANLKQVKKEDTEKEKDLRDVGDWRKNIEEKSGMEGRKK 322211101122122222221112221111111111111101111 MFEAGES 2234579 >Ubiquitin carboxyl-termin; SWP:P57080; PDB:1VDLA GSSGSSGMTVEQNVLQQSAAQKHQQTFLNQLREITGINDAQILQQ 999999987654343221112110000000000000000000000 ALKDSNGNLELAVAFLTAKNAKTPPQEETSGPSSG 00000000000000000111135799999999999 >hypothetical protein (RAF; SWP:Q9C5H4; PDB:1VDYA GSSGSSGESYWRSRMIDAVTSDEDKVAPVYKLEEICDLLRSSHVS 998643200000000000000000000000000000000000000 IVKEFSEFILKRLDNKSPIVKQKALRLIKYAVGKSGSEFRREMQR 000000000000000000000000000000000000000000000 NSVAVRNLFHYKGHPDPLKGDALNKAVRETAHETISAIFSEENGS 000000000000001111111000000000000000000013568 GPSSG 99999 >proline-rich protein fami; SWP:Q9M158; PDB:1VEEA GSSGSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLG 532100100000000000000000000000000000000000000 KKAVSTVYNGEDKPGFLKKLSLKFKDPENTTLYILDKFDGNSELV 000000000000000000000000000000000000000000000 AELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPKKTSGPSSG 00000000000000000000000000000000000112344567 >NifU-like protein HIRIP5; SWP:Q9QZ23; PDB:1VEHA GSSGSSGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDG 999876432100000000000000000000001100000000000 IVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPEVEGVEQVSGPS 000000012222111100000000000000000000000001246 SG 89 >F-spondin; SWP:P35446; PDB:1VEXA GSIPCLLSPWSEWSDCSVTCGKGMRTRQRMLKSLAELGDCNEDLE 643211100000001000000000000000011122222211000 QAEKCMLPECP 00000001112 >vanadium-binding protein; SWP:Q86BW2; PDB:1VFIA ISEFAPVDCKGQCTTPCEPLTACKEKCAESCETSADKKTCRRNCK 544322111111000000000000000001111111110000000 KADCEPQDKVCDACRMKCHKACRAANCASECPKHEHKSDTCRACM 000000000000000000000000011111122322211111100 KTNCK 11112 >NEUROTOXIN B-IV; SWP:P01525; PDB:1VIB_ ASATWGAAYACENNCRKKYDLCIRCQGKWAGKRGKCAAHCIIQKN ------2--100000000000000000000000000000000000 NCKGKCKKE 000001123 >VIGILIN; SWP:Q00341; PDB:1VIG_ INRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSE 532000000001100000011111000000000000000000112 KSNLIRIEGDPQGVQQAKRELLELAS 11000000000000000000000012 >mannitol-specific PTS sys; SWP:P00550; PDB:1VKRA GSAGDVTNDLSHVRKIIVACDAGMGSSAMGAGVLRKKIQDAGLSQ ----------00000000000000000000000000000000000 ISVTNSAINNLPPDVDLVITHRDLTERAMRQVPQAQHISLTNFLD 000000000000000000000000000000000000000000000 SGLYTSLTERLVAAQRHTENEVKVKDSLKDSFDDS 00000000000000000------------------ >NEUROTOXIN; SWP:P01492; PDB:1VNA_ KEGYLVKKSDGCKYDCFWLGKNEHCNTECKAKNQGGSYGYCYAFA 100001123221111111111111000000011111100001100 CWCEGLPESTPTYPLPNKSC 00001111111112233333 >VPU PROTEIN; SWP:P19554; PDB:1VPU_ LQIDRLIDRITERAEDSGNESEGDQEELSALVERGHLAPWDVDDL 221110000011100001011110111112222322100001224 >DELTA-ATRACOTOXIN-HV1; SWP:P13494; PDB:1VTX_ CAKKRNWCGKTEDCCCPMKCVYAWYNEQGSCQSTISALWKKC 000000001221100000000000000000000000000000 >ARGONAUTE2; SWP:Q9VUQ5; PDB:1VYNA GAMAMPMIEYLERFSLKAKINNTTNLDYSRRFLEPFLRGINVVYT ---000000000000000000111000000000000000000000 PPQSFQSAPRVYRVNGLSRAPASSETFEHDGKKVTIASYFHSRNY 000000000000000000000000000001100000000000000 PLKFPQLHCLNVGSSIKSILLPIELCSIEEGQALNRKDGATQVAN 000000000000000100000000000000--------------- MIKYAATS -------- >ORF K3; SWP:P90495; PDB:1VYXA MEDEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTIS 864210000000000000000000000000000000000000000 RNTACQICGVVYNTR 000000000000012 >ATP SYNTHASE COUPLING FAC; SWP:P02721; PDB:1VZSA NKELDPVQKLFVDKIREYRTKRQTSGGPVDAGPEYQQDLDRELFK 543222111100000000011123344433323211110000000 LKQMYGKADMNTFPNFTFEDPKFEVVEKPQS 0000011122332333457799999999999 >TYROSINE-PROTEIN KINASE L; SWP:P07948; PDB:1W1FA GSPEEQGDIVVALYPYDGIHPDDLSFKKGEKMKVLEEHGEWWKAK -----2100000000000000000000000000000000000000 SLLTKKEGFIPSNYVAKLNT 00000000000000001236 >PHOSPHATIDYLINOSITOL 3-KI; SWP:P35169; PDB:1W1NA NELDVPEQVDKLIQQATSIERLCQHYIGWCPFW 532100000000000000000000000000000 >CONGLUTIN; SWP:Q647G9; PDB:1W2QA GPMRRERGRQGDSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDS 999999999876531001001000000000000000112346678 YDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQ 888764321110000000001232111000000000000002211 DRQMVQQFKRELMSLPQQCNFRAPQRCDLDVSGGRCS 2110000000000000000112233323445443334 >PYRUVATE DEHYDROGENASE E2; SWP:Q8ZUR6; PDB:1W4IA GSREVAAMPAARRLAKELGIDLSKVKGTGPGGVITVEDVKRYAEE 864210000000000000000000000000000000000000000 TAKATAPAPAPKAVEKA 00124579999999999 >UBIQUITIN CARBOXYL-TERMIN; SWP:Q9Y4E8; PDB:1W6VA MGSSHHHHHHSSGLVPRGSHMMAEGGAADLDTQRSDIATLLKTSL ---------------------986420000000000000000001 RKGDTWYLVDSRWFKQWKKYVGFDSWDKYQMGDQNVYPGPIDNSG 111000000000000000000000001000000000000000000 LLKDGDAQSLKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIA 001111110001100000000000000000000000000000000 RKVVEQ 000122 >FASCICLIN-LIKE PROTEIN; SWP:Q3IXZ6; PDB:1W7DA ETGDIVETATGAGSFTTLLTAAEAAGLVDTLKGDGPFTVFAPTDA 000000000000000000000000000000000000000000000 AFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMSSDLTEGMT 000000000000000000000000000000000000000000000 AETVEGGALTVTLEGGPKVNGVSISQPDVDASNGVIHVIDGVLMP 000000000000000000000000000000000000000000000 GA 00 >CHOLINE BINDING PROTEIN A; SWP:Q97N74; PDB:1W9RA GSHMPEKKVAEAEKKVEEAKKKAEDQKEEDRRNYPTNTYKTLELE 332211100000000000000000000001111111111110000 IAESDVEVKKAELELVKEEAKEPRNEEKVKQAKAEVESKKAEATR 000000000000000001111221111000100000000000000 LEKIKTDRKKAEEEAKRKAAEEDKVKEKP 00000001111234556899999999999 >TRANSCRIPTION ELONGATION; SWP:P0AFF9; PDB:1WCNA GDNKPADDLLNLEGVDRDLAFKLAARGVCTLEDLAEQGIDDLADI 310000000000000000000000000000000000000000000 EGLTDEKAGALIMAARNICWFGDEA 0000000000000000000001356 >PTS SYSTEM, N,N'-DIACETYL; SWP:P69791; PDB:1WCRA AEELEEVVMGLIINSGQARSLAYAALKQAKQGDFAAAKAMMDQSR 000000000000000000000000000000000000000000000 MALNEAHLVQTKLIEGDAGEGKMKVSLVLVHAQLHLMTSMLAREL 000000000000000000000000000000000000000000000 ITELIELHEKLKA 0000000000000 >splicing factor, putative; SWP:Q8RXF1; PDB:1WE6A GSSGSSGKFDESALVPEDQFLAQHPGPATIRVSKPNENDGQFMEI 987654432111000000000000000000000001222100000 TVQSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHY 000000000000000000000000000000000000000000000 NVGAGEILTLSLRERSGPSSG 000000000000023568999 >Sf3a1 protein; SWP:Q8K4Z5; PDB:1WE7A GSSGSSGTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEWKLNG 887655321110000000000000000000000000120000000 QGLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNS 000000000000000000000000000000000000000000000 LAYYNMASGAVIHLALKERSGPSSG 0000000000000000012345789 >Tudor and KH domain conta; SWP:Q80VL1; PDB:1WE8A GSSGSSGILTENTPVFEQLSVPQRSVGRIIGRGGETIRSICKASG 765443311110000000000000000000000000000000000 AKITCDKESEGTLLLSRLIKISGTQKEVAAAKHLILEKVSEDEEL 000000111111100000000000000000000000000000000 RKRIAHSASGPSSG 00000124467899 >PHD finger family protein; SWP:O81488; PDB:1WE9A GSSGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAE 986432100000001111100000000000000000000000000 HIKQYKCPSCSNKSGPSSG 0000000000001246789 >PHD finger family protein; SWP:Q9C810; PDB:1WEEA GSSGSSGMERGVDNWKVDCKCGTKDDDGERMLACDGCGVWHHTRC 999999875432210000011111111100000000000000000 IGINNADALPSKFLCFRCIELSGPSSG 011111110000000000000124589 >RNA-binding protein 12; SWP:Q9NTZ6; PDB:1WELA GSSGSSGKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDF 999999999999999887653321000000000000000000000 FKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQY 000000000000000000000000000000000000000000000 MGNRFIQVHPITKKGMLEKIDMIRKRLQSGPSSG 0000000000000000000000000000124679 >PHF8; SWP:NA; PDB:1WEPA GSSGSSGMALVPVYCLCRQPYNVNHFMIECGLCQDWFHGSCVGIE 999998632100000000000010000000000000000000000 EENAVDIDIYHCPDCEAVFGPSIMKNWHSGPSSG 0000000000000000000000000013467888 >RIKEN cDNA 1110020M19; SWP:Q9D168; PDB:1WEVA GSSGSSGADDFAMEMGLACVVCRQMTVASGNQLVECQECHNLYHQ 999999764321110000000000000010000000000000000 DCHKPQVTDKEVNDPRLVWYCARCTRQMKRMAQKNQKSGPSSG 0000000000000000000000000000013457999999999 >HYPOTHETICAL PROTEIN (RIK; SWP:Q921F4; PDB:1WEXA GSSGSSGSHHKVSVSPVVHVRGLCESVVEADLVEALEKFGTICYV 999997654321000000000000000000000000000000000 MMMPFKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYSTS 000000000000000000000000000000000000000000000 KRITRPGNSGPSSG 00000123467899 >calcipressin 1; SWP:NA; PDB:1WEYA GSSGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFKS 653210000000000000000000000000000000000000000 FKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFAQTLHIGSSH 000000000000000000000000000000000000134679999 LAPPNPDKSGPSSG 99999999999999 >Heterogeneous nuclear rib; SWP:NA; PDB:1WEZA GSSGSSGSSFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPMRVH 999997664321110000000000000000000000000000000 IEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNS 000011000000000000000000000000000000000000000 TAGTSGSGPSSG 001234578999 >TAR DNA-binding protein-4; SWP:Q13148; PDB:1WF0A GSSGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFA 754210000000000000000000000000000000000000000 FVTFADDQIAQSLCGEDLIIKGISVHISNAEPKHNSNSGPSSG 0000000000000000000000000000000112234667778 >RNA-binding protein Raly; SWP:Q9UKM9; PDB:1WF1A GSSGSSGMSLKLQASNVTNKNDPKSINSRVFIGNLNTALVKKSDV 999999999999999998642111000000000000000000000 ETIFSKYGRVAGCSVHKGYAFVQYSNERHARAAVLGENGRVLAGQ 000000000000000000000000000000000000000000000 TLDINMAGEPKPDRSGPSSG 00000001357999999999 >Heterogeneous nuclear rib; SWP:P07910; PDB:1WF2A GSSGSSGKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVG 999999999765310000000000000000000000000000000 CSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKV 000000000000000000000000000000000000000000011 NRSGPSSG 24679999 >sidekick 2 protein; SWP:Q58EX2; PDB:1WF5A GSSGSSGRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFD 999997654443110000000000000000000000000000000 GNSPLIRYILEMSENNAPWTVLLASVDPKATSVTVKGLVPARSYQ 000000000000001000000000000000000000000000000 FRLCAVNDVGKGQFSKDTERVSLPESGPSSG 0000000000000000000000000124689 >Enigma homologue protein; SWP:NA; PDB:1WF7A GSSGSSGSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQA 986420000000000000000000000000000000000000000 HVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAA 000000000000000000000000000000010000000000123 AKSEPVSSGPSSG 4578999999999 >Neurabin-I; SWP:Q9ULJ8; PDB:1WF8A GSSGSSGLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVK 976532000000000000000000000000000010000000000 TVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKG 000000000000000000000000000000000000000000000 NVRFVIGREKPSGPSSG 00000000000123445 >NPL4 family protein; SWP:NA; PDB:1WF9A GSSGSSGTMLRVRSRDGLERVSVDGPHITVSQLKTLIQDQLQIPI 987542100000000000000000000000000000000000000 HNQTLSTNRNLLLAKSPSDFLAFTDMADPNLRISSLNLAHGSMVY 000000000000000000000000000000000000000000000 LAYEGERTIRGSGPSSG 00000000011234689 >Hypothetical protein 1500; SWP:Q8VDV8; PDB:1WFDA GSSGSSGQDSDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDML 999998653100000000000000000000000000000000000 LQVLKGTKESSKRCVLRTKISGYMDRAENIKKYLDQEKEDGKSGP 000000000000000000000000000000000000000123568 SSG 999 >Regulating synaptic membr; SWP:Q9UQ26; PDB:1WFGA GSSGSSGHSHSDKHPVTWQPSKDGDRLIGRILLNKRLKDGSVPRD 999999987542100000000000000000000000011010011 SGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEV 100000000000000000000000000000000000000000000 LEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRSGPSSG 00000000000000000000000000000000000012467 >putative elicitor-respons; SWP:NA; PDB:1WFJA GSSGSSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQK 976421000000000000000001110000000000000000000 SNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTEDDAVG 000000000000000000000000000000000000000000000 EATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPSGPSS 000000000000000000000000000000000000000001245 G 6 >zinc finger, FYVE domain; SWP:NA; PDB:1WFKA GSSGSSGMESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSAL 999653210000000000000000000000000000000000000 VPRAGNTQQKVCKQCHTILTRGSSDNASKWSPPQNYKSGPSSG 0000000000000000000001356689999999999999999 >synaptotagmin XIII; SWP:Q7L8C5; PDB:1WFMA GSSGSSGSWNQAPKLHYCLDYDCQKAELFVTRLEAVTSNHDGGCD 986654332100000000000000000000000000012222100 CYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTA 000000000000000000000000000000000000000000000 TLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSGP 000000000122222100000000000000000000000000236 SSG 789 >sidekick 2; SWP:Q58EX2; PDB:1WFNA GSSGSSGPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKN 999999886543210000000000000000000000000000000 GILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIE 000000000000000000000000000000000000000000000 VAAMTSKGQGQVSASTISSGVPPSGPSSG 00000000000000000000000124457 >sidekick 2; SWP:Q58EX2; PDB:1WFOA GSSGSSGRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVR 999999999999999999765332100000000000000000000 LIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAPSARQYTAT 000000000000000000000000111100000000000000000 GLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRSGPSSG 0000000000000000000000000000000012346789 >UNR protein; SWP:O75534; PDB:1WFQA GSSGSSGGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFH 999999999996431100000000000000000000000000000 CSQYNGNLQDLKVGDDVEFEVSSDRRTGKPIAVKLVKISGPSSG 00000000000000000000000000000000000000012346 >1700129L13Rik protein; SWP:Q9D968; PDB:1WFTA GSSGSSGPGAPSTVRISKNVDGIHLSWEPPTSPSGNILEYSAYLA 976421010000000000000000000000111111010000000 IRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHIDYTSRPA 012345554321000000000000000000000000000111000 IVFRISAKNEKGYGPATQIRWLQGNSKSGPSSG 000000001010000000000012356799999 >unnamed protein product; SWP:NA; PDB:1WFUA GSSGSSGMEPHKVVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQ 998754432121110000000000000000000000000011112 GPQEQWLRFSIEEEDPKMHSYGVIYTGYATRHVVEGLEPRTLYKF 100000000000000000000000000000000000000000000 RLKVTSPSGEYEYSPVVSVATTRESGPSSG 000000000000000000000000135689 >membrane associated guany; SWP:Q86UL8; PDB:1WFVA GSSGSSGQDFDYFTVDMEKGAKGFGFSIRGGREYKMDLYVLRLAE 987654321100000000001100000000000000000000000 DGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRL 000000000000000000000000100000000000000000000 LLKRGTGSGPSSG 0000123556789 >Kalirin-9a; SWP:Q8BTT9; PDB:1WFWA GSSGSSGSTMTVIKDYYALKENEICVSQGEVVQVLAVNQQNMCLV 876431000000000000000000000000000000000000000 YQPASDHSPAAEGWVPGSILAPFSGPSSG 00000010000000000000000113468 >regulator of G-protein si; SWP:P97492; PDB:1WFYA GSSGSSGDQEVRLENRITFQLELVGLERVVRISAKPTKRLQEALQ 999999999775421000000000110000000000000000000 PILAKHGLSLDQVVLHRPGEKQPMDLENPVSSVASQTLVLDTPPD 000000000000000000001000000000000000000000001 AKMSEARSSGPSSG 13467899999999 >nitrogen fixation cluster; SWP:Q9D7P6; PDB:1WFZA GSSGSSGENPRNVGSLDKTSKNVGTGLVGAPACGDVMKLQIQVDE 998655432110011000000000000000000000000000000 KGKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKNTDIA 000000000000000000000000000000000000000000000 KELCLPPVKLHCSMLAEDAIKAALADYKLKQESKSGPSSG 0000000000000000000000000000000013467899 >KIAA1579 protein; SWP:Q9HCJ3; PDB:1WG1A GSSGSSGILVKNLPQDSNCQEVHDLLKDYDLKYCYVDRNKRTAFV 643200000000000000000000000000000000000000000 TLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDALLCSGPSSG 0000000000000000000000000000001233578999999 >HYPOTHETICAL PROTEIN (RIK; SWP:Q9D0B0; PDB:1WG4A GSSGSSGGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYA 999998764432110000000000000000000000000000000 DVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYPE 000000000000000000000000000000000000000000000 RSSGPSSG 13457899 >Heterogeneous nuclear rib; SWP:P55795; PDB:1WG5A GSSGSSGNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 999999986643200000000000000000000000000000000 MTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFK 000000000000000000000000000000000000000000000 SSRAEVRTSGPSSG 00000012247899 >HYPOTHETICAL PROTEIN (RIK; SWP:Q5SV54; PDB:1WG6A GSSGSSGLKGEPDCYALSLESSEQLTLEIPLNDSGSAGLGVSLKG 999999999999999986431000000000000000000000000 NKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLG 000000000000000000000000000000000000000000000 KSNHEAMETLRRSMSMEGNIRGMIQLVILRRSGPSSG 0000000000000000000000000000000123468 >Dedicator of cytokinesis; SWP:Q9BZ29; PDB:1WG7A GSSGSSGAASLGSQKGGITKHGWLYKGNMNSAISVTMRSFKRRFF 999999999997533200000000000101111000011000000 HLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQNNKVRRF 000001100000000000000000000000000000000000010 AFELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFEAAMQEKR 000000001000000000000000000000000000000000011 NGDSHEDDESGPSSG 235899999999999 >Homocysteine-responsive e; SWP:Q15011; PDB:1WGDA GSSGSSGVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYPE 865321000000000122100000000000000000000000000 RPRPEDQRLIYSGKLLLDHQCLRDLLPKQEKRHVLHLVCNVKSGP 000000000001000010100000000111100000000023456 SSG 899 >Hypothetical protein 2610; SWP:Q8K0W9; PDB:1WGEA GSSGSSGMAVFHDEVEIEDFQYDEDSETYFYPCPCGDNFAITKED 976543100000000000000000000000000000000000000 LENGEDVATCPSCSLIIKVIYDKDQFMCGETVSGPSSG 00000000000000000000000000001245689999 >Upstream Binding Factor 1; SWP:P25976; PDB:1WGFA GSSGSSGKPSQEGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPE 999999999999999986544210000000000000000000000 LSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSERKSGPSSG 000000000000000000000000000000000011246899999 >Ubiquitin carboxyl-termin; SWP:Q9JMA1; PDB:1WGGA GSSGSSGYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQP 654321000000000000000000000000000000000000000 ARQKVMVKGGTLKDDDWGNIKMKNGMTVLMMGSADALPEEPSAKT 000000000000000000100000000000001012457899999 SGPSSG 999999 >ubiquitin-like 3; SWP:NA; PDB:1WGHA GSSGSSGMSSHVPADMINLRLILVSGKTKEFLFSPNDSASDIAKH 999876543200000000000001210000000000000000000 VYDNWPMDWEEEQVSSPNILRLIYQGRFLHGNVTLGALKLPFGKT 000112222233333222100000000000000000000000000 TVMHLVARETLPEPNSQGQRSGPSSG 00000001234567789999999999 >RIKEN cDNA 2900073H19 pro; SWP:NA; PDB:1WGKA GSSGSSGMAAPLCVKVEFGGGAELLFDGVKKHQVALPGQEEPWDI 999864200000000000000000000000000000000000000 RNLLVWIKKNLLKERPELFIQGDSVRPGILVLINDADWELLGELD 000000000000000000000000000000000000000000000 YQLQDQDSILFISTLHGGSGPSSG 000000000000000135689999 >Toll-interacting protein; SWP:Q9H0E2; PDB:1WGLA GSSGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINS 987532100000000000000000000000000000000000000 LLQMGEEPSGPSSG 00001247899999 >Ubiquitin conjugation fac; SWP:Q14139; PDB:1WGMA GSSGSSGLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTV 999999999974311000000000000000000000000000000 DRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERK 000000000000000000000000000000000000000000000 QQSGPSSG 12357999 >ubiquitin associated prot; SWP:Q9NZ09; PDB:1WGNA GSSGSSGAYSELQMLSPSERQCVETVVNMGYSYECVLRAMKKKGE 876543210000000000000000000000000000000000000 NIEQILDYLFAHSGPSSG 000000000000125568 >Probable cyclic nucleotid; SWP:O82226; PDB:1WGPA GSSGSSGVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGD 765433312110000000000000000000000000000000000 PVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGDELLTWA 000000000000000001134432100000000000000000000 LDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVASQFRRSGPS 000012100000000000000000000000000000000135688 SG 99 >FYVE, RhoGEF and PH domai; SWP:Q69ZL1; PDB:1WGQA GSSGSSGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASEDV 654332100000000000000000000000000000000000100 AALESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVFKADDAHS 000000000000000011111100000000000000000000000 TQRWIDAFQEGTVSGPSSG 0000000000000013467 >Growth factor receptor-bo; SWP:Q14451; PDB:1WGRA GSSGSSGRPHVVKVYSEDGACRSVEVAAGATARHVCEMLVQRAHA 998652100000000000000000000000000000000013443 LSDETWGLVECHPHLALERGLEDHESVVEVQAAWPVGGDSRFVFR 321110000000000000000000000000000001100000000 KNFASGPSSG 0002468999 >amyloid beta (A4) precurs; SWP:Q9DBR4; PDB:1WGUA GSSGSSGPTPKTELVQKFRVQYLGMLPVDRPVGMDTLNSAIENLM 998766554432100000000000000000000000000000000 TSSSKEDWPSVNMNVADATVTVISEKNEEEVLVECRVRFLSFMGV 000000000000000000000000000000000000000000000 GKDVHTFAFIMDTGNQRFECHVFWCEPNAANVSEAVQAACSGPSS 000000000000011000000000000000000000000003678 G 9 >KIAA1068 protein; SWP:Q8IVD9; PDB:1WGVA GSSGSSGQKNPDSYNGAVRENYTWSQDYTDLEVRVPVPKHVVKGK 999999997543233211110000000000000000000000000 QVSVALSSSSIRVAMLEENGERVLMEGKLTHKINTESSLWSLEPG 000000000000000000100000000000000000000000000 KCVLVNLSKVGEYWWNAILEGEEPIDIDSGPSSG 0000000000111100000010011124579999 >'Signal Recoginition Part; SWP:NA; PDB:1WGWA GSSGSSGADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLE 987643200000000000000000000000000000000000000 ADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKV 000000000000000000000111222100000000000000022 KVYSGPSSG 356899999 >KIAA1903 protein; SWP:Q6P0N0; PDB:1WGXA GSSGSSGDKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAVGSRS 999765421000000000000000000000000000000000000 PEECQRKYMENPRGKGSQKHVTSGPSSG 0000000000001234567999999999 >Rap guanine nucleotide ex; SWP:Q92565; PDB:1WGYA GSSGSSGEEIFCHVYITEHSYVSVKAKVSSIAQEILKVVAEKIQY 999864210000000000000000000000000000000000000 AEEDLALVAITFSGEKHELQPNDLVISKSLEASGRIYVYRKDLAD 000000000001100000000000011233332000000001211 TLNPFAENSGPSSG 11000135799999 >Ubiquitin carboxyl-termin; SWP:O94966; PDB:1WH0A GSSGSSGVDEPESMVNLAFVKNDSYEKGPDSVVVHVYVKEICRDT 998765321000000000000000000000000000000000000 SRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIE 000000000000000000000000000000000000000000000 PEQCTFCFTASRIDICLRKRQSQRWGGLEAPAARVGGASGPSSG 00000000000000000000000000000001356899999999 >KIAA1095 protein; SWP:Q9UPQ7; PDB:1WH1A GSSGSSGDIHQEMDREELELEEVDLYRMNSQDKLGLTVCYRTDDE 000000000000000000000000000000000000000000000 DDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVAL 000000000000000000000000000000000000000000000 LTSEENKNFSLLIARPELQLDEGWMDDDSGPSSG 0000000000000000000000000000000000 >Hypothetical protein At5g; SWP:Q9FT92; PDB:1WH2A GSSGSSGVRVLSYDKEKLNWLYKDPQGLVQGPFSLTQLKAWSDAE 999876543211000000000000000000000000000000000 YFTKQFRVWMTGESMESAVLLTDVLRLSGPSSG 000000000000000000000000000012578 >59 kDa 2'-5'-oligoadenyla; SWP:Q15646; PDB:1WH3A GSSGSSGIQVFVKNPDGGSYAYAINPNSFILGLKQQIEDQQGLPK 865421000000000000000000000000000000000000000 KQQQLEFQGQVLQDWLGLGIYGIQDSDTLILSKKKGSGPSSG 000000000000000000000000000000000011345678 >Homeobox protein Cux-2; SWP:O14529; PDB:1WH6A GSSGSSGQYELYMYREVDTLELTRQVKEKLAKNGICQRIFGEKVL 987542210000000000000000000000000000000000000 GLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLSDQLGQAVGQ 000000000000000000000000000000000000000124799 QPGASSGPSSG 99999999999 >Homeobox protein Cux-2; SWP:O14529; PDB:1WH8A GSSGSSGYSGSQAPGGIQEIVAMSPELDTYSITKRVKEVLTDNNL 999999999864331000000000000000000000000000000 GQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWL 000000000000000000000000000000000000000000000 NDPHNVEKLRDMKKLSGPSSG 000000000000014678899 >40S ribosomal protein S3; SWP:P23396; PDB:1WH9A GSSGSSGFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATR 986542000000000000000000000000000000000000000 TQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGSGPS 000000000000000000000000000000000000012467899 SG 99 >KIAA0147 protein; SWP:Q14160; PDB:1WHAA GSSGSSGRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRI 965310000000000112210000000111000000000000000 AEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAASPTI 000000000000000000000000000000000000000000000 ALLLEREAGSGPSSG 000000012344579 >UBA/UBX 33.3 kDa protein; SWP:Q922Y1; PDB:1WHCA GSSGSSGAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWL 999975310000000000000000000000000000000000000 MEHEDDPDVDEPLSGPSSG 0000001112345678899 >Tubulin specific chaperon; SWP:Q9D1E6; PDB:1WHGA GSSGSSGNEELRAQQEAEAAQRLSEEKAQASAISVGSRCEVRAPD 999998654432221111111111000000100000000000111 HSLRRGTVMYVGLTDFKPGYWVGVRYDEPLGKNDGSVNGKRYFEC 111000000000111111100000001111000000111110000 QAKYGAFVKPSAVTVGDSGPSSG 01000000000000001235789 >CLIPR-59; SWP:Q9DB67; PDB:1WHHA GSSGSSGKSPSSPSLGSLQQREGAKAEVGDQVLVAGQKQGIVRFY 999999999999999999864311000000000000000000000 GKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCAPRHGVFAPAS 000000000000000000000000000000000000000000000 RIQRIGSGPSSG 000001357899 >RIKEN cDNA 1700024K14; SWP:Q8CI96; PDB:1WHJA GSSGSSGLPNSDHTTSRAMLTSLGLKLGDRVVIAGQKVGTLRFCG 999999999865421111000000000000000000000000000 TTEFASGQWAGIELDEPEGKNNGSVGRVQYFKCAPKYGIFAPLSK 000000000000000000000000000000000000000000000 ISKLKDSGPSSG 000013468999 >RIKEN cDNA 1700024K14; SWP:Q8CI96; PDB:1WHKA GSSGSSGEGTVKLHEGSQVLLTSSNEMATVRYVGPTDFASGIWLG 999999986431010000000000000000000000000000000 LELRSAKGKNDGAVGDKRYFTCKPNYGVLVRPSRVTYRGISGPSS 000000000000000000000000000000000000123568999 G 9 >Cylindromatosis tumor sup; SWP:Q9NQC7; PDB:1WHLA GSSGSSGIDVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGIF 987542000000000000000000000000000011345432100 FGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIES 000000000000000000000000000000000000000000012 GPSSG 46899 >Cylindromatosis tumor sup; SWP:Q9NQC7; PDB:1WHMA GSSGSSGPPLEINSRVSLKVGETIESGTVIFCDVLPGKESLGYFV 998652100000000000000000000000000000000000000 GVDMDNPIGNWDGRFDGVQLCSFACVESTILLHINDIIPESSGPS 000000000000000000000000000000000000000024579 SG 99 >RNA helicase A; SWP:NA; PDB:1WHQA GSSGSSGIKNFLYAWCGKRKMTPAYEIRAVGNKNRQKFMCEVRVE 975431000000000000000000000000000000000000000 GFNYAGMGNSTNKKDAQSNAARDFVNYLVRINEVKSEEVPAVGIV 000000000000000000000000000000000000000001246 PPPSGPSSG 799999999 >Hypothetical KIAA1002 pro; SWP:Q9Y2K5; PDB:1WHRA GSSGSSGTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEILEFIN 999999876543100000000000000000000000000000000 DNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKT 000000000000000000000000000000000011010000000 SNTRIPEQRFSEHIKDEKNTEFQQRFILSGPSSG 0000000000001112345677899999999999 >polynucleotide phosphoryl; SWP:Q8K1R3; PDB:1WHUA GSSGSSGPQKIFTPSAEIVKYTKIIAMEKLYAVFTDYEHDKVSRD 999998654211000000000000000000000001111221110 EAVNKIRLDTEEHLKEKFPEVDQFEIIESFNIVAKEVFRSIILNE 000000000000000000000000000000000000000000122 YKRCDGRDSGPSSG 34689999999999 >poly(A)-specific ribonucl; SWP:Q8VDG3; PDB:1WHVA GSSGSSGGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQIS 999999999864310000000000000000000000000000000 WIDDTSAFVSLSQPEQVQIAVNTSKYAESYRIQTYAEYVGKKQKG 000000000000000000000000000000000000000000123 KQVKSGPSSG 4467899999 >hypothetical protein RIKE; SWP:Q8R3C6; PDB:1WHWA GSSGSSGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSL 987542110000000000000000000000000000000000000 TKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTIKKE 000000000000000000000000000000000000000001234 ASQSGPSSG 567899999 >hypothetical protein RIKE; SWP:Q6PHZ5; PDB:1WHYA GSSGSSGKIGYGKANPTTRLWVGGLGPNTSLAALAREFDRFGSIR 999999765432100000000000000000000000000000000 TIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFA 000000000000000000000000000000000000000000000 KSGPSSG 1224567 >Mitogen activated protein; SWP:Q9WVS7; PDB:1WI0A GSSGSSGPFCAMENQVLVIRIKIPNSGAVDWTVHSGPQLLFRDVL 999999999997531000000000010000000000000000000 DVIGQVLPEATTTAFEYEDEDGDRITVRSDEEMKAMLSYYYSTVM 000000000001000000000000000000000000000000000 EQQVNGQLIEPLQIFPRSGPSSG 00000000000000000012335 >calcium-dependent activat; SWP:Q9ULU8; PDB:1WI1A GSSGSSGMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSY 876542100000000000000000000000000000000000000 REKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIF 011100000000000000000000000100000000000000000 ASDDEQDRILWVQAMYRATGQSHKPVPPTQSGPSSG 000000000000000000000000000012357899 >RIKEN cDNA 2700099C19; SWP:Q9CZG9; PDB:1WI2A GSSGSSGNNELTQFLPRIVTLKKPPGAQLGFNIRGGKASQLGIFI 999998766543211000000011221100000001222210000 SKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKTARE 000000000000000000000000000000000000000000000 ISMRVRFFSGPSSG 00000000134579 >DNA-binding protein SATB2; SWP:Q9UPW6; PDB:1WI3A GSSGSSGPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQL 999999999753100000000000000000000000000000000 DLPKHTIIKFFQNQRYHVKHSGPSSG 00000000000000001123579999 >syntaxin binding protein; SWP:Q9WV89; PDB:1WI4A GSSGSSGSPLDRDPAFRVITVTKETGLGLKILGGINRNEGPLVYI 999999754320000000000000000000000000000000000 HEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAK 000000000000000000000000000000000000000000000 LRSESPWEIAFIRSGPSSG 0110000000000013579 >RRP5 protein homolog; SWP:Q14690; PDB:1WI5A GSSGSSGKNVNRVLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDG 999999998764321111000000000000000000000000001 TRAFLPLLKAQEYIRQKNKGAKLKVGQYLNCIVEKVKGNGGVVSL 000000000000000000000000000000000000011000000 SVGHSEVSTAIATEQQSWNLNNLSGPSSG 00113467999999999999999999999 >Hypothetical protein (RIK; SWP:Q9CW46; PDB:1WI6A GSSGSSGILIRGLPGDVTNQEVHDLLSDYELKYCFVDKYKGTAFV 653211000000000000000000000000000000000000000 TLLNGEQAEAAINTFHQSRLRERELSVQLQPTDALLCSGPSSG 0000000000000000000000000000000111246899999 >SH3-domain kinase binding; SWP:Q8R550; PDB:1WI7A GSSGSSGRRCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEG 997532000000000000000000000000000000000000000 VLNGKTGMFPSNFIKELSGPSSG 00000000000000000024699 >Eukaryotic translation in; SWP:P23588; PDB:1WI8A GSSGSSGSRLPKSPPYTAFLGNLPYDVTEESIKEFFRGLNISAVR 665433211001000000000000000000000000000000000 LPREPSNPERLKGFGYAEFEDLDSLLSALSLNEESLGNKRIRVDV 000011111000000000000000000000000000000000000 ADQAQDKDSGPSSG 01123445678999 >Protein C20orf116 homolog; SWP:Q80WW9; PDB:1WI9A GSSGSSGFLTEFINYIKKSKVVLLEDLAFQMGLRTQDAINRIQDL 986432000000000000000000000000000000000000000 LTEGTLTGVIDDRGKFIYITPSGPSSG 000000000000000000011246689 >hypothetical ubiquitin-li; SWP:Q3V209; PDB:1WIAA GSSGSSGINVRLKFLNDTEELAVARPEDTVGTLKSKYFPGQESQM 865421000000000000000000000000000000000000000 KLIYQGRLLQDPARTLSSLNITNNCVIHCHRSPPGAAVSGPSASS 000000000000000000000000000000000112335688999 GPSSG 99999 >60S ribosomal protein L12; SWP:NA; PDB:1WIBA GSSGSSGPPKFDPNEVKVVYLRCTGGEVGATSALAPKIGPLGLSP -9--9-999985421000000000001122211001101110000 KKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALSGPS 000000000000000000000000000000000001234668999 SG 99 >Hypothetical Protein RIKE; SWP:Q9CWP6; PDB:1WICA GSSGSSGKKPLSVFKGPLLHISPAEELYFGSIESGEKKTLIVLTN 999997542210000000000000000001233421000000000 VTKNIVAFKVRTTAPEKYRVKPSNSSCDPGASIDIIVSPHGGLTV 000000000000000000000000000000000000000011101 SAQDRFLIMAAEMEQSSGTGPAELSQFWKEVPRNKVMEHRLRCHT 000000000000000101000000000000000000000000001 VESSKPNSLMLSGPSSG 24578999999999999 >DNA-binding protein RAV1; SWP:Q9ZWM9; PDB:1WIDA GSSGSSGRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSS -------31000000000000001111000000000000001234 NVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEK 544321000000000000000000001210000000000000000 NLRAGDVVSFSRSNGQDQQLYIGWKSRSGSDLDASGPSSG 0000000000000012210000000013468889------ >RIM binding protein 2; SWP:O15034; PDB:1WIEA GSSGSSGTSKQRYSGKVHLCVARYSYNPFDGPNENPEAELPLTAG 999997654322110000000000000000000000000000000 KYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQDNESRLAST 000000000000000000000000000000000001134578999 SGPSSG 999999 >RIKEN cDNA 4930408O21; SWP:Q9D9M4; PDB:1WIFA GSSGSSGSKNEKEQLSKAKASVSSLNKVIQTKLTVGNLGLGLVVI 999999999999999999976443210000000000000000000 QNGPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREF 000000000000000000000000000000000000000000000 LKLLQNITIGTVLQIKAYRGFLEIPQEWQDSGPSSG 000000000000000000000000000012235567 >KIAA1808 protein; SWP:Q6H8Q1; PDB:1WIGA GSSGSSGCDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFAEGE 866431000000000110000000000000000000000000000 EMYLQGSSIWHPACRQAARTEDSGPSSG 0000000000000000000123467899 >mitochondrial ribosome re; SWP:Q9D6S7; PDB:1WIHA GSSGSSGLDHITVVTADGKVALNQIGQISMKSPQVILVNMASFPE 975311000000000100000000000000000000000000000 CTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTSGPSSG 000000000000000000000000000000135789999 >Hypothetical UPF0222 prot; SWP:P60003; PDB:1WIIA GSSGSSGRKPPPKKKMTGTLETQFTCPFCNHEKSCDVKMDRARNT 999999999999987543211000000000000000000000000 GVISCTVCLEEFQTPITYLSEPVDVYSDWIDACESGPSSG 0000000000000000000000000000000000135789 >ETHYLENE-INSENSITIVE3-lik; SWP:O23116; PDB:1WIJA GSSGSSGSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTP -------21000000000000000000000000001111110000 PPWWPTGNEEWWVKLGLPKSQSPPYRKPHDLKKMWKVGVLTAVIN 000000000000000000000000001111000000000000000 HMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEESLIQQS 00000000000001112112211110000000000001122344- GPSSG ----- >Thioredoxin-like protein; SWP:Q9CQM9; PDB:1WIKA GSSGSSGLKVLTNKASVMLFMKGNKQEAKCGFSKQILEILNSTGV 997532000000000000000000000112200000000000000 EYETFDILEDEEVRQGLKTFSNWPTYPQLYVRGDLVGGLDIVKEL 000000000000000000000000000000011100000000000 KDNGELLPILKGESGPSSG 0000000000012468999 >KIAA0161 protein; SWP:P50876; PDB:1WIMA GSSGSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKE 642110000000000000000000000000000000000000000 GLETAISCPDAACPKQGHLQENEIECMVAAEIMQRYKKLQFERSG 000000000000000000000000000000000000000000112 PSSG 4689 >Flotillin 2; SWP:NA; PDB:1WINA GSSGSSGQRISLEIMTLQPRCEDVETAEGVALTVTGVAQVKIMTE 776543322111000000000000000000000000000000001 KELLAVACEQFLGKNVQDIKNVVLQTLEGHLRSILGTLTVEQIYQ 111000000000100000000000000000000000000000000 DRDQFAKLVREVAAPDVGRMGIEILSFTIKDVYDKVDYLSSLGKT 000000000000000000000000000000000000001111235 QTSGPSSG 68999999 >Protein arginine N-methyl; SWP:Q922H1; PDB:1WIRA GSSGSSGEPAHGRQHTPCLFCDRLFASAEETFSHCKLEHQFNIDS 999999999863100000000000000000000000000000000 MVHKHGLEFYGYIKLINFIRLKNPTVEYMNSIYNPVPWEKDEYLK 000000000000000000000000000000000000000000000 PVLEDDLLLQFDVEDLYEPVSTPFSSGPSSG 0000000000000000012356999999999 >KIAA1514 protein; SWP:Q58EX2; PDB:1WISA GSSGSSGTISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGK 999987665321000000000000000000000000000000000 TSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFT 000000000000000010000000000000000000000000000 CYSFRMRQVNIVGTSPPSQPSRKIQTLQSGPSSG 0000000000000000000000000000012457 >Hook homolog 1; SWP:Q8BIL5; PDB:1WIXA GSSGSSGLPLCDSLIIWLQTFKTASPCQDVKQLTNGVTMAQVLHQ 764321000000000000000000000000000000000000000 IDVAWFSESWLSRIKDDVGDNWRIKASNLKKVLHGITSYYHEFLG 000000000000000000000000000000000000000000000 QQISEELIPDLNQITECADPVELGRLLQLILGCAVNCEKKQEHIK 000000000000000000000000000000000000000000000 NIMTLEESVQHVVMTAIQELMSKSGPSSG 00000000000000000000000112345 >DNA-binding protein SATB2; SWP:Q9UPW6; PDB:1WIZA GSSGSSGKPEPTNSSVEVSPDIYQQVRDELKRASVSQAVFARVAF 999999987543221000000000000000000000000000000 NRTQGLLSEILRKEEDPRTASQSLLVNLRAMQNFLNLPEVERDRI 000000000000000000000000000000000000000000000 YQDERSGPSSG 00000124567 >squamosa promoter-binding; SWP:Q9S7P5; PDB:1WJ0A GSAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQR --0000000000000000010000000000000000000000000 FCQQCSRFHVLEEFD 000001000001112 >Numb protein; SWP:Q9QZS3; PDB:1WJ1A GSSGSSGASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMH 999999998531000000000000000000000000000000000 ICEDAVKRLKATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIE 000000000000000000000000000000000000000000000 KVSFCAPDRNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSHA 000000000000000000000111100000000000000000000 VGCAFAACLERKQKRSGPSSG 000000000000013456899 >KIAA1496 protein; SWP:Q9P232; PDB:1WJ3A GSSGSSGTVNVTTKKTPPSQPPGNVVWNATDTKVLLNWEQVKAME 999999997653210000000000000000000000000000001 NESEVTGYKVFYRTSSQNNVQVLNTNKTSAELVLPIKEDYIIEVK 000000000000000000000000000000000000000000000 ATTDGGDGTSSEQIRIPRITSSGPSSG 000000000000000000012357899 >hypothetical protein (RIK; SWP:Q8K2X3; PDB:1WJ5A GSSGSSGNKDNLDLAGLTSLLSEKIKEFLQEKKMQSFYQQELETV 999986532110000000000000000000000000000000000 ESLQSLASRPVTHSTGSDQVELKDSGTSGVAQRVFKNALQLLQEK 000000000001233444544443221100000000000000000 GLVFQRDSGSDKLYYVTTKDKDLQSGPSSG 000001110100000001357999999999 >Hypothetical protein (RSG; SWP:Q80X50; PDB:1WJ7A GSSGSSGNQNQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQ 999999999999998754221110000000001110000000000 LIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGK 000000000000000000000000000000013579999999999 KKGVSGQKSGPSSG 99999999999999 >HIV-1 INTEGRASE; SWP:P12497; PDB:1WJBA FLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQL 000000000000000000000000000000000000000000000 KGEAMHGQVD 1221224446 >Tudor domain containing p; SWP:Q9H7E2; PDB:1WJIA GSSGSSGVDEKALKHITEMGFSKEASRQALMDNGNNLEAALNVLL 986421000000000000000000000000000000000000000 TSNKQKPVMGPPSGPSSG 001246999999999999 >hypothetical protein F20O; SWP:O49453; PDB:1WJJA GSSGSSGSTVKRKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVT 999999987655321000000000000000000000000001122 RKTRPASSLSRPSQPSRIVECLIGDETGCILFTARNDQVDLMKPG 235688888876531000000000000000000000000000000 ATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKEDNNLSL 000000000000000000000000000000000000000000000 VEYESGPSSG 0001357899 >C330018D20rik protein; SWP:Q9CWB7; PDB:1WJKA GSSGSSGNLSASNRALPVLTLFTKAPCPLCDEAKEVLQPYKDRFI 999999987643210000000000000000000000000000000 LQEVDITLPENSTWYERYKFDIPVFHLNGQFLMMHRVNTSKLEKQ 000000000000000000000000000000000000000000000 LRKLSGPSSG 0001245679 >Cypher protein; SWP:NA; PDB:1WJLA GSSGSSGMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKA 764210000000000000000000000000000000000000000 AQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKS 000000000000000000000000000000000000000000000 >beta-spectrin III; SWP:O15020; PDB:1WJMA GSSGSSGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLG 998642000000000000000000000000000000000000000 FYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGLQ 000000000000000000000000000000000100000000000 DGKEYLFQAKDEAEMSSWLRVVNAAIASGPSSG 100000000000000000000000000012457 >Tubulin-folding protein T; SWP:Q8CIV8; PDB:1WJNA GSSGSSGQLLTLKIKCSNQPERQILEKQLPDSMTVQKVKGLLSRL 987431000000000000011000000000000000000000000 LKVPVSELLLSYESSKMPGREIELENDLQPLQFYSVENGDCLLVR 000000000000000000000000000000000000000000000 WSGPSSG 0013469 >T-plastin; SWP:P13797; PDB:1WJOA GSSGSSGNDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVD 999964210000000000000000000000000000000000000 LIDAIQPGCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVYA 000000000000000000000000000000000000000000000 LPEDLVEVKPKMVMTVFACLMGRGMKRVSGPSSG 0000000000000000000000000124689999 >Zinc finger protein 295; SWP:Q9ULJ3; PDB:1WJPA GSSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVC 999999999997532211111111111111000000000110000 PYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQV 000000000000000000000000000000000000000000000 EVHNQNNMAPTSGPSSG 00011122223456899 >KIAA1798 protein; SWP:Q96JM7; PDB:1WJQA GSSGSSGVKPPHGFQKKMKLEVVDKRNPMFIRVATVADTDDHRVK 977654321100000000000000000000000000000000000 VHFDGWNNCYDYWIDADSPDIHPVGWCSKTGHPLQPPLSPLELME 000000010000000000000000000000000000000111223 ASEHGGCSTPGSGPSSG 46899999999999999 >KIAA1617 protein; SWP:Q5VUG0; PDB:1WJRA GSSGSSGPIDLITVGSLIELQDSQNPFQYWIVSVIENVGGRLRLR 544321000000000000000011000000000000000000000 YVGLEDTESYDQWLFYLDYRLRPVGWCQENKYRMDPPSEIYPLKM 000000011000000000000000000111110000000000000 ASEWKCTLEKSLIDAAKFPLPMEVFKDHADLSGPSSG 0000000000000000000000000012444556789 >KIAA1798 protein; SWP:Q96JM7; PDB:1WJSA GSSGSSGPYNKNGFKVGMKLEGVDPEHQSVYCVLTVAEVCGYRIK 999987653200000000000000000000000000000000000 LHFDGYSDCYDFWVNADALDIHPVGWCEKTGHKLHPPKGYKEEEF 000000000000000000000000000000000000000000010 NWQTYLKTCKAQAAPKSLFENQNITVIPSGFSGPSSG 0000000000000000000001135689999999999 >Transcription elongation; SWP:NA; PDB:1WJTA GSSGSSGMGLEEELLRIAKKLEKMVSRKKTEGALDLLKKLNSCQM 999986420000000000000000000000000000000000000 SIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPR 000000000000000000000100000000000000000001357 TTKGERESGPSSG 8999999999999 >NEDD8 ultimate buster-1; SWP:Q9Y5A7; PDB:1WJUA GSSGSSGDNYRTTGIATIEVFLPPRLKKDRKNLLETRLHITGREL 999998764321110000000000000111000000000000000 RSKIAETFGLQENYIKIVINKKQLQLGKTLEEQGVAHNVKAMVLE 000000000000000000000000000000000000000000000 LKQSSGPSSG 0123456789 >Phosphoacetylglucosamine; SWP:Q9CYR6; PDB:1WJWA GSSGSSGAIYVDLPNRQLKVKVADRRVISTTDAERQAVTPPGLQE 999987543210000000000011345567788765543210000 AINDLVKKYTLARAFVRPSGTEDIVRVYAEANSQESADRLAYEVS 000000000000000001233211000000000000000000000 LLVFQLAGGIGERPQPSGPSSG 0000000000121124667789 >1700030A21Rik protein; SWP:Q91ZF0; PDB:1WJZA GSSGSSGMALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYH 999999764542110000000000000000000000000000000 PDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 000001100000000000000000000000000000000000023 PSSG 6799 >KIAA0970 protein; SWP:Q9Y2H6; PDB:1WK0A GSSGSSGDEETKAFEALLSNIVKPVASDIQARTVVLTWSPPSSLI 997542000000000000000000000000000000000000000 NGETDESSVPELYGYEVLISSTGKDGKYKSVYVGEETNITLNDLK 000000000000000000000000100000000000000000000 PAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRISGPS 000000000000000000000000000000001112346899999 SG 99 >Hypothetical protein yk10; SWP:Q19853; PDB:1WK1A GSSGSSGVKFLTVNDDILSMPQARNFCASAGGYLADDLGDDKNNF 865432000000000000000000000000000000000000000 YSSIAANTQFWIGLFKNSDGQFYWDRGQGINPDLLNQPITYWANG 000000000000000000000000000000000000000000000 EPSNDPTRQCVYFDGRSGDKSKVWTTDTCATPRPFICQKHRYDSD 000000000000000000000000000000000000000023468 HKPNTIGDASGPSSG 999999999999999 >YEAST KILLER TOXIN; SWP:P10410; PDB:1WKT_ GDGYLIMCKNCDPNTGSCDWKQNWNTCVGIGANVHWMVTGGSTDG 321000000000000100000000100000000000000122322 KQGCATIWEGSGCVGRSTTMCCPANTCCNINTGFYIRSYRRVE 1000000000010000000000000000000010000000000 >Afadin; SWP:Q9QZQ1; PDB:1WLNA GSSGSSGPEKLPYLVELSPDGSDSRDKPKLYRLQLSVTEVGTEKF 986532110000000000000001100000000000000000000 DDNSIQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVDGQRIS 110000000000000000000000000000001000000000000 ETTMLQSGMRLQFGTSHVFKFVDPSGPSSG 000000000000000000000000001347 >sufE protein; SWP:Q72KV6; PDB:1WLOA MVPPKLKQALELFKSLPKELRSQVLLEYAAKVPPPPPGVELERVH 100000000000000000000000000000000000000000000 ECQTPFFVHADVEGGKVRLYFHVPDEAPTVKAFAGLLREGLEGES 000000000000010000000000000000000000000000000 PEAVLEVPPGFYRGYGLEEFFTPLRLRGLEAALLRLQAQVRKALT 000000000000000000000000000000000000000000001 S 1 >Alpha-actinin 4; SWP:O43707; PDB:1WLXA GSTEKQLEAIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIE 321110000000000000000000000000000000000111100 EIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAESNHIKLS 000000000000000000000000000000000000000111122 GSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEEQSKQQ 221100100000000000000000000000000000111 >Neurotoxin BmP01; SWP:Q9U8D2; PDB:1WM7A ATCEDCPEHCATQNARAKCDNDKCVCEPK 21000000000000000011111000000 >Thioredoxin H-type; SWP:Q42443; PDB:1WMJA GPMAAEEGMAAEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTA --------1110000000000000000000000000000000000 SWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAM 111100000000000000000000000000000000000000000 PTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAASASA 0000000000000000000000000000000000011245 >IsTX; SWP:P0C194; PDB:1WMTA VHTNIPCRGTSDCYEPCEKKYNCARAKCMNRHCNCYNNCPW 00000000000000000000000000000000000001112 >trypsin inhibitor; SWP:Q8WQ22; PDB:1WO9A AGECTPGQTKKQDCNTCTCTPTGIWGCTRKACRTT 00000000000000000000000000000000000 >PUTATIVE MINIMAL NUCLEOTI; SWP:NA; PDB:1WOTA GSHMDLETLRARREAVLSLCARHGAVRVRVFGSVARGEAREDSDL 211000000000000000000000000000000000000111100 DLLVAFEEGRTLLDHARLKLALEGLLGVRVDIVSERGLAPRLREQ 000000011000000000000000000000000000000000000 VLREAIPL 00000000 >Hypothetical 15.6 kDa pro; SWP:P36141; PDB:1WPIA MSFWKTLQRQPRTISLFTNDIASNIKSQKCLQLLKGDVSHRFDVE 432211111100000000000000000000000000111110000 IANRFPTWDQLQYMRTSCPQGPVSLQRQIPKLDSVLKYKHTDPTF 000000000000000010100000000001000000000000000 GMDLQKCVQRGLWNPKEALWVDWENKLVGNEPADIDKYIIQRK 0000000000000010000000000000000000000000012 >Aptotoxin VII; SWP:P49271; PDB:1WQBA WLGCARVKEACGPWEWPCCSGLKCDGSECHPQ 64210010000112111000000000000001 >Toxin APETx1; SWP:P61541; PDB:1WQKA GTTCYCGKTIGIYWFGTKTCPSNRGYTGSCGYFLGICCYPVD 100000000000000000000000000000000000000001 >Proto-oncogene tyrosine-p; SWP:P07332; PDB:1WQUA GSSGSSGEVQKPLHEQLWYHGAIPRAEVAELLVHSGDFLVRESQG 654321100000000000000000000000000000000000011 KQEYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLIDHLLS 100000000000000000000100000000000000000000000 TQQPLTKKSGVVLHRAVPSGPSSG 000000000000000000013468 >ubiquitin-protein ligase; SWP:Q8CFI0; PDB:1WR3A GSPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSL 753100000000001100000000000000000013 >ubiquitin-protein ligase; SWP:Q8CFI0; PDB:1WR4A GSPGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIM 753100100000001100000000000000000012 >Nedd4-2; SWP:Q8CFI0; PDB:1WR7A GSPGIQSFLPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRLK 99976421001000000000000000000000000000011 >myeloid cell leukemia seq; SWP:P97287; PDB:1WSXA GPLGSEDDLYRQSLEIISRYLREQATGSKDSKPLGEAGAAGRRAL 986432000000000000000000000112211111100000000 ETLRRVGDGVQRNHETAFQGMLRKLDIKNEGDVKSFSRVMVHVFK 000000000000000000000000000000000000000000000 DGVTNWGRIVTLISFGAFVAKHLKSVNQESFIEPLAETITDVLVR 100000000000000000000000000000000000000000000 TKRDWLVKQRGWDGFVEFFHVQDLEGG 000000000000000000001233457 >BuTX-MTX; SWP:NA; PDB:1WT7A WCSTCLDLACTGSKDCYAPCRKQTGCPNAKCINKSCKCYGC 32332211000000000000000000000000110000001 >Pcdha4 protein; SWP:O88689; PDB:1WUZA GNSQIHYSIPEEAKHGTFVGRIAQDLGLELTELVPRLFRVASKDR 210000000000000000000000000000000000000000000 GDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQV 000000000000000000000000011000000000000000000 FHVEVEVRDINDN 0000000000112 >Sialic acid synthase; SWP:Q9NR45; PDB:1WVOA GSSGSSGSVVAKVKIPEGTILTMDMLTVKVGEPKGYPPEDIFNLV 976431000000000000000000000000000000000000000 GKKVLVTVEEDDTIMEELVDNHGKKIKSSGPSSG 0000000000000000000012457999999999 >Excitatory insect selecti; SWP:O61668; PDB:1WWNA KKNGYAVDSSGKVSECLLNNYCNNICTKVYYATSGYCCLLSCYCF 210000012111011000000000000000000000000000000 GLDDDKAVLKIKDATKSYCDVQII 011111000000000000000001 >Threonyl-tRNA synthetase,; SWP:P26639; PDB:1WWTA GSSGSSGDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADN 876543100000000000000000000000000000000010011 TVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYSGPSSG 0000000000000000000000000000123333223457899 >Hypothetical protein FLJ2; SWP:Q9H6S3; PDB:1WWUA GSSGSSGFRVERSQPASQPLTYESGPDEVRAWLEAKAFSPRIVEN 999999999998754210000000000000000000000000000 LGILTGPQLFSLNKEELKKVCGEEGVRVYSQLTMQKAFLEKQQSG 000000000000000000000000000000000000000011246 SELSGPSSG 789999999 >Connector enhancer of kin; SWP:Q969H4; PDB:1WWVA GSSGSSGMEPVETWTPGKVATWLRGLDDSLQDYPFEDWQLPGKNL 987543200000000000000000000000000000000000000 LQLCPQSLEALAVRSLGHQELILGGVEQLQALSSRLQTENSGPSS 000000000000000000000000000000000124679999999 G 9 >E74-like factor 5 ESE-2b; SWP:Q58DT0; PDB:1WWXA GSSGSSGSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSE 876655421000000000000000000000000000000000000 ALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERVDRRLVYKFG 000000000001000000000000000000000000000000000 KNAHGWQEDKLSGPSSG 00000001246899999 >Thioredoxin-like protein; SWP:O43396; PDB:1WWYA GSSGSSGGYMDLMPFINKAGCECLNESDEHGFDNCLRKDTTFLES 999864200000000000000000000000000000000000000 DCDEQLLITVAFNQPVKLYSMKFQGPDNGQGPKYVKIFINLPRSM 000000000000000000000000000000000000000000000 DFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQNVNSVTIFVQ 000000000000000000000000000000000000000000000 SNQGEEETTRISYFTFIGTPVQATNMNDFKSGPSSG 000000000000000000000001234456789999 >Cytoplasmic protein NCK2; SWP:O43639; PDB:1WX6A GSSGSSGLSNGQGSRVLHVVQTLYPFSSVTEEELNFEKGETMEVI 999988765532100000000000000000000000000000000 EKPENDPEWWKCKNARGQVGLVPKNYVVVLSDGPALHPAHSGPSS 000000000000000000000000000000000014579999999 G 9 >Ubiquilin 3; SWP:Q9H347; PDB:1WX7A GSSGSSGSPAPVQDPHLIKVTVKTPKDKEDFSVTDTCTIQQLKEE 999999975431000000000000000000000000000000000 ISQRFKAHPDQLVLIFAGKILKDPDSLAQCGVRDGLTVHLVIKRQ 000000000000000000000000000000000000000000000 HRAMGNECPASGPSSG 1234567999999999 >RIKEN cDNA 4931431F19; SWP:Q9D4I8; PDB:1WX8A GSSGSSGVSGREPSSRIIRVSVKTPQDCHEFFLAENSNVRRFKKQ 999999998654310000000000000000000000000000000 ISKYLHCNADRLVLIFTGKILRDQDILSQRGILDGSTVHVVVRSH 000000000000000000000000000000000000000000012 SGPSSG 467999 >HLA-B associated transcri; SWP:Q5STX1; PDB:1WX9A GSSGSSGLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPS 443321000000000000000000000000000000000000000 EKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPSGPSSG 00000000000000000000000000000000013579999 >Afadin; SWP:Q9QZQ1; PDB:1WXAA GSSGSSGSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVAESLE 977643220000000000000000000000000000000000000 KYGLEKENPKDYCIARVMLPPGAQHSDERGAKEIILDDDECPLQI 000000000000000000001113332111000000000000000 FREWPSDKGILVFQLKRRPPSGPSSG 00000000000000000012445679 >Epidermal growth factor r; SWP:Q9H6S3; PDB:1WXBA GSSGSSGKYVKILYDFTARNANELSVLKDEVLEVLEDGRQWWKLR 876432000000000000000000000000000000000000000 SRSGQAGYVPCNILGEASGPSSG 00000000000000000135568 >Single-strand recognition; SWP:NA; PDB:1WXLA SHMPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKEL 643211000000000000000000000000000000000000000 KDKSKWEDAAAKDKQRYHDEMRNYKPEA 0000000000000000000011224689 >A-Raf proto-oncogene seri; SWP:NA; PDB:1WXMA GSSGSSGGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQ 999853100000000000000000000000000000000000000 DCCVVYRLIKGRKTVTAWDTAIAPLDGEELIVEVLSGPSSG 00000000010000000000000000000000000224679 >Toxin APETx2; SWP:NA; PDB:1WXNA GTACSCGNSKGIYWFYRPSCPTDRGYTGSCRYFLGTCCTPAD 000000000000000001100111000000000000000001 >THO complex subunit 1; SWP:NA; PDB:1WXPA GSSGSSGPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSE 999987554310000000000000000000000000000000000 IRQIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLS 000000000000000000000000000000000000000000000 DLAESLTNDNETNSSGPSSG 00000001235789999999 >Hypothetical protein FLJ2; SWP:NA; PDB:1WXTA GSSGSSGLKMQVLYEFEARNPRELTVVQGEKLEVLDHSKRWWLVK 866532000000000000000000000000000000000000000 NEAGRSGYIPSNILEPLSGPSSG 00000000000000000235689 >peroxisomal biogenesis fa; SWP:NA; PDB:1WXUA GSSGSSGTNWASGEDDHVVARAEYDFVAVSDEEISFRAGDMLNLA 976432100000000000000000000000000000000000000 LKEQQPKVRGWLLASLDGQTTGLIPANYVKILGKRRGRKTIESGP 000000001000000000000000000000000000001112456 SSG 778 >BAG-family molecular chap; SWP:NA; PDB:1WXVA GSSGSSGLTVTVTHSNEKHDLHVTSQQGSSEPVVQDLAQVVEEVI 765321000000000000000000000000000000000000000 GVPQSFQKLIFKGKSLKEMETPLSALGIQDGCRVMLIGKKNSGPS 000000000000000000000000000000000000000013456 SG 89 >Np95-like ring finger pro; SWP:NA; PDB:1WY8A GSSGSSGMWIQVRTIDGSKTCTIEDVSRKATIEELRERVWALFDV 876421000000000000000000000000000000000000000 RPECQRLFYRGKQLENGYTLFDYDVGLNDIIQLLVRPDSGPSSG 00000000000000000000000000000000000001234578 >Skeletal muscle LIM-prote; SWP:NA; PDB:1WYHA GSSGSSGCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGS 544310000000000001000000000000000000000000000 RSFVPDKGAHYCVPCYENKFASGPSSG 000000000000000000000235689 >protocadherin beta 14; SWP:NA; PDB:1WYJA GSSGSSGAGSATITYSVLEETDRGSLVGNLAKDLGLSLRELITRG 998754322100000000110000000000000000000000000 AQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHFQV 000001221000000000000000000001111121110000000 LLKSPVQFIQGEIQLQDVNDHAPEFMEDESGPSSG 00000000000000001235689999999999999 >Transgelin-2; SWP:NA; PDB:1WYMA GSSGSSGQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQ 999999998642100000000000000000000000000000000 NWLKDGTVLCELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQ 000000000000000000000000000000000000000000000 AAERYGINTTDIFQTVDLWEGKNMACVQRTLMNLGGLAVARDDGL 000000000000000000000000000000000000000000000 FSGDPNWFPKKSKESGPSSG 00000000001246899999 >Calponin-2; SWP:NA; PDB:1WYNA GSSGSSGNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDG 999999998642100000000000000000000000000000000 TILCTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNP 000000000000000000000000000000000000000000000 VDLFEANDLFESGNMTQVQVSLLALAGKAKTKGLQSGVDIGVKYS 000000000000000000000000000000011235799999999 EKQERSGPSSG 99999999999 >Calponin 1; SWP:NA; PDB:1WYPA GSSGSSGNKLAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDG 999999997542100000000000000000000000000000000 IILCEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKP 000000000000000000000000000000000000000000000 HDIFEANDLFENTNHTQVQSTLLALASMAKTKGNKVNVGVSGPSS 000000000000000000000000000000000000000012468 G 9 >Spectrin beta chain, brai; SWP:NA; PDB:1WYQA GSSGSSGAKDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIV 999865320000000000000000000000000000000000000 HKHRPDLLDFESLKKCNAHYNLQNAFNLAEKELGLTKLLDPEDVN 000000000000001000000000000000000000000000000 VDQPDEKSIITYVATYYHYFSKMKALAVEGKSGPSSG 0000000000000000000000012468999999999 >Rho guanine nucleotide ex; SWP:NA; PDB:1WYRA GSSGSSGEEQIVTWLISLGVLESPKKTICDPEEFLKSSLKNGVVL 754211000000000000000000100000000000000000000 CKLINRLMPGSVEKFCLDPQTEADCINNINDFLKGCATLQVEIFD 000000000000000000000000000000000000000000000 PDDLYSGVNFSKVLSTLLAVNKATESGPSSG 0000000000000000000000000246799 >HMG-BOX transcription fac; SWP:NA; PDB:1WZ6A GSSGSSGARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADW 987654432100000000000000000000000100000000000 WAVLDPKEKQKYTDMAKEYKDAFMKANPGYRSGPSSG 0000000000000000000000001223333467899 >Pleckstrin; SWP:NA; PDB:1X05A GSSGSSGVILKEEFRGVIIKQGCLLKQGHRRKNWKVRKFILREDP 999764322100001000000000000123221000000000000 AYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEI 000000000000000000000000000001223332210000000 ITADEVHYFLQAATPKERTEWIKAIQMASRTGKSGPSSG 000000000000000000000000000000023468999 >Ras GTPase-activating-lik; SWP:NA; PDB:1X0HA GSSGSSGISLKYTAARLHEKGVLLEIEDLQVNQFKNVIFEISPTE 999875310000000000000000000000000000000000000 EVGDFEVKAKFMGVQMETFMLHYQDLLQLQYEGVAVMKLFDRAKV 000000000113333210000000000000000000000000000 NVNLLIFLLNKKFYGKSGPSSG 0000000000000011357899 >Signal-transducing adapto; SWP:NA; PDB:1X1FA GSSGSSGQERLKITALPLYFEGFLLIKRSGYREYEHYWTELRGTT 999999999986531000000000000011110000000000000 LFFYTDKKSIIYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEE 000001000000000000000000000123321000000000000 VQLKTENTESGEEWRGFILTVTELSVPQNVSLLPGQVIKLHEVLE 000000000000000000000000000000000000000000000 REKKRRIESGPSSG 00000001135689 >Pleckstrin 2; SWP:NA; PDB:1X1GA GSSGSSGSLSTVELSGTVVKQGYLAKQGHKRKNWKVRRFVLRKDP 999998642100000000000000000122221000000000000 AFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGN 000000000000100000000000000001222112212211111 LFKVITKDDTHYYIQASSKAERAEWIEAIKKLTSGPSSG 000000000000000000000000000000000134446 >Ubiquitin-like protein SB; SWP:NA; PDB:1X1MA GSSGSSGMSLSDWHLAVKLADQPLAPKSILQLPETELGEYSLGGY 999987654210000000000000000000000011111110000 SISFLKQLIAGKLQESVPDPELIDLIYCGRKLKDDQTLDFYGIQP 000000000000000000000000000000000000000000000 GSTVHVLRKSWSGPSSG 00000000012357899 >moricin; SWP:NA; PDB:1X22A GKIPVKAIKKAGAAIGKGLRAINIASTAHDVYSFFKPKHKKK 653221111000011111111111110011011122333579 >Homeobox protein Cux-2; SWP:NA; PDB:1X2LA GSSGSSGAGPGAEEEQLDTAEIAFQVKEQLLKHNIGQRVFGHYVL 999999976532100000000000000000000000000000000 GLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFLSDEQNVLALR 000000000000000000000000000000000000000000000 TIQVRSGPSSG 00000024579 >LAG1 longevity assurance; SWP:NA; PDB:1X2MA GSSGSSGTAQPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSI 666544200000000000000000000000000000000000000 QRWFRQRRNQEKPSGPSSG 0000000000123578999 >Homeobox protein PKNOX1; SWP:NA; PDB:1X2NA GSSGSSGKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAA 877555444321000000000000000000000000000000000 QTNLTLLQVNNWFINARRRILQSGPSSG 0000000000000000000000235679 >Protein arginine N-methyl; SWP:NA; PDB:1X2PA GSSGSSGEEFVAIADYAATDETQLSFLRGEKILILRQTTADWWWG 986421000000000000000000000000000000000000000 ERAGCCGYIPANHVGKHSGPSSG 00000000000000013457789 >Signal transducing adapte; SWP:NA; PDB:1X2QA GSSGSSGSEIQLNNKVARKVRALYDFEAVEDNELTFKHGEIIIVL 999999999875421000000000000000000000000000000 DDSDANWWKGENHRGIGLFPSNFVTTNLNIETEAAAVSGPSSG 0000000000000000000000000000134679999999999 >ATP-dependent protease La; SWP:NA; PDB:1X37A MAGYTEIEKLEIVKDHLLPKQIKEHGLKKSNLQLRDQAILDIIRY -21100000000000000000000000000000000000000000 YTREAGVRSLERQLAAICRKAAKAIVAEERKRITVTEKNLQDFIG 001110000000000000000000011221000000000000001 KRIFRYGQAETEDQVGVVTGLAYTTVLRHHHHHH 111011---------------------------- >Synapse associated protei; SWP:NA; PDB:1X3AA GSSGSSGTNDEETIQQQILALSADKRNFLRDPPAGVQFNFDFDQM 987654321000000000000000000000000011101000000 YPVALVMLQEDELLSKMRFALVPKLVKEEVFWRNYFYRVSLIKQS 000000000000000000000000000000000000000000000 AQLTSGPSSG 1235799999 >Transforming growth facto; SWP:NA; PDB:1X3BA GSSGSSGMGTVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTV 999864210000000000000000000000000000000000000 FAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGGIG 000000000000000000000000000000000000000000111 ALVRLKSLQGDKLEVSLKNNVVSVNKEPVAEPDIMATNGVVHVIT 000000000000000000000000000000000000000000000 NVLQPSGPSSG 00000124567 >Fibronectin type-III doma; SWP:NA; PDB:1X3DA GSSGSSGAEIFTTLSCEPDIPNPPRIANRTKNSLTLQWKAPSDNG 999999998764321100000000000000000000000000000 SKIQNFVLEWDEGKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRL 000000000000000000000000000000000000000000000 SARNDYGTSGFSEEVLYYTSGCSGPSSG 0000000000000000000011345799 >Leupaxin; SWP:NA; PDB:1X3HA GSSGSSGKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCG 998766544443210000000000000000000000000000000 DCFTSFSTGSFFELDGRPFCELHYHHRRGSGPSSG 00000011100000000000000000001236799 >cpSRP43; SWP:NA; PDB:1X3PA AVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTLVLL 321110000000001000000001122110000000000000000 YQQQQPMNE 000000123 >cpSRP43; SWP:NA; PDB:1X3QA GSQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAE 532111111111000011222100001111112111110000000 DVAKDYEDGLEY 000000000011 >Transcriptional regulator; SWP:NA; PDB:1X3UA GSHMDDANDIRARLQTLSERERQVLSAVVAGLPNKSIAYDLDISP 542110000000000000000000000000000000000000000 RTVEVHRANVMAKMKAKSLPHLVRMALAGGFGPS 0000000000000000000000000000000112 >ARAP2; SWP:NA; PDB:1X40A GSSGSSGMSSVSEVNVDIKDFLMSINLEQYLLHFHESGFTTVKDC 999999999753100000000000000000000000000000000 AAINDSLLQKIGISPTGHRRRILKQLQIILSKMQDIPIYASGPSS 000000000000000000000000000000000234799999999 G 9 >Transcriptional adaptor 2; SWP:NA; PDB:1X41A GSSGSSGDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEE 976542100000000000000000000000000000000000000 CEKHYMKYFSGPSSG 000000000012578 >SH3 domain GRB2-like prot; SWP:NA; PDB:1X43A GSSGSSGLNDLKESSNNRKARVLYDYDAANSTELSLLADEVITVF 999999987654322000000000000000000000000000000 SVVGMDSDWLMGERGNQKGKVPITYLELLNSGPSSG 000000000000001000000000000001245799 >Myosin-binding protein C,; SWP:NA; PDB:1X44A GSSGSSGIMVTKQLEDTTAYCGERVELECEVSEDDANVKWFKNGE 976431000000000000000000000000000000000000000 EIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTGGQSSA 000000000000000000000000000000000000000000000 KLSVDLKSGPSSG 0000000135689 >amyloid beta (A4) precurs; SWP:NA; PDB:1X45A GSSGSSGDVFIEKQKGEILGVVIVESGWGSILPTVIIANMMHGGP 965310000000000000000000000210000000000000000 AEKSGKLNIGDQIMSINGTSLVGLPLSTCQSIIKGLKNQSRVKLN 000000000000000000000000000000000000000000000 IVSGPSSG 00001135 >DGCR8 protein; SWP:NA; PDB:1X47A GSSGSSGEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPS 999998765543321000000000000000000000000000000 EPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQT 000000000000000000000000000000000000000001134 SESGPSSG 55678899 >Interferon-induced, doubl; SWP:NA; PDB:1X48A GSSGSSGYIGLVNSFAQKKKLSVNYEQCEPNSELPQRFICKCKIG 866432000000000000000000000112232211000000000 QTMYGTGSGVTKQEAKQLAAKEAYQKLLKSPPKTAGTSGPSSG 0000000000000000000000000000000123679999999 >Interferon-induced, doubl; SWP:NA; PDB:1X49A GSSGSSGMASDTPGFYMDKLNKYRQMHGVAITYKELSTSGPPHDR 999999864211100000000000000000000000000000000 RFTFQVLIDEKEFPEAKGRSKQEARNAAAKLAVDILDNENKVDCH 000000000000000000000000000000000000000346899 TSGPSSG 9999999 >splicing factor, arginine; SWP:NA; PDB:1X4AA GSSGSSGMSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYK 999999999999999977542100000000000000000000000 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYR 000000000001110000000000000000000000000000000 LRVEFPRSGRGTGSGPSSG 0000001345678999999 >Heterogeneous nuclear rib; SWP:NA; PDB:1X4BA GSSGSSGMEKTLETVPLERKKREKEQFRKLFIGGLSFETTEESLR 999999999999999987542110000000000000000000000 NYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARP 000000000000000000100100000000000000000000000 HSIDGRVVEPKRAVAREESGSGPSSG 00000000000100135799999999 >Splicing factor, arginine; SWP:NA; PDB:1X4CA GSSGSSGGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYA 999999999985421000000000000000000000000000000 DVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKVD 000000000000000000000000000000000000000000000 GPRSPSYGRSRSSGPSSG 134678999999999999 >Matrin 3; SWP:NA; PDB:1X4DA GSSGSSGQKGRVETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISN 998655432211000000000000001000000000000000000 HLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQ 000000000000000000000000000000000000000000001 KYKRIKSGPSSG 112211345678 >RNA binding motif, single; SWP:NA; PDB:1X4EA GSSGSSGLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNK 642100000000000000000000000000000000000000000 CKGYGFVDFDSPSAAQKAVTALKASGVQAQMAKQSGPSSG 0000000000000000000000000000000013456789 >Matrin 3; SWP:NA; PDB:1X4FA GSSGSSGKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLK 999999999999999765432211000000000000000000000 LAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVDHCLKKALWFQ 000000000000000000000000000000000000000000000 GRCVKVDLSEKYKKLVSGPSSG 0000000001110001346799 >Nucleolysin TIAR; SWP:NA; PDB:1X4GA GSSGSSGNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQT 999986543100000000000000000000000000000000000 FSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHV 000000000000000000000000000000000000000000000 VKCYWGKESPDMTSGPSSG 0000001235568999999 >RNA-binding protein 28; SWP:NA; PDB:1X4HA GSSGSSGLPSDVTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYV 999999997542100000000000000000000000000000000 RVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDG 000001111000000000000000000000000000121000000 RQLKVDLAVTRDEAASGPSSG 000000000123568999999 >Inhibitor of growth prote; SWP:NA; PDB:1X4IA GSSGSSGYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKG 865311000000000000000000000000000000000000000 KWYCPQCTAAMKRRGSRHKSGPSSG 0000000000000012468999999 >RING finger protein 38; SWP:NA; PDB:1X4JA GSSGSSGQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCN 986432100000000011121100000000000010000000000 HEFHAKCVDKWLKANRTCPICRADSGPSSG 000000000000000000000000012345 >Skeletal muscle LIM-prote; SWP:NA; PDB:1X4KA GSSGSSGCQECKKTIMPGTRKMEYKGSSWHETCFICHRCQQPIGT 764311000000000000000000000000000000000000000 KSFIPKDNQNFCVPCYEKQHASGPSSG 000000000000000000001134467 >Skeletal muscle LIM-prote; SWP:NA; PDB:1X4LA GSSGSSGCAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSL 975431000000000133210000000000000000000000000 VGRGFLTERDDILCPDCGKDISGPSSG 000000000000000000001246789 >Far upstream element bind; SWP:NA; PDB:1X4MA GSSGSSGHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAG 999999765432100000000000000000000000000000000 VKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGSG 000000013344321000000000000000000000000012467 PSSG 9999 >Far upstream element bind; SWP:NA; PDB:1X4NA GSSGSSGHQQQRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESG 999876544321000000000000000000010000000000000 CKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRSGPS 000000000010000000000000000000000000000002478 SG 99 >Splicing factor 4; SWP:NA; PDB:1X4OA GSSGSSGKVSPPEDEEAKNLAEKLARFIADGGPEVETIALQNNRE 655432210000000000000000000000000000000000000 NQAFSFLYDPNSQGYRYYRQKLDEFRKSGPSSG 000000000000000000000000001358999 >Putative splicing factor,; SWP:NA; PDB:1X4PA GSSGSSGVGTIDQLVKRVIEGSLSPKERTLLKEDPAYWFLSDENS 876542100000000000000000000000000000000000000 LEYKYYKLKLAEMQRSGPSSG 000000000000000012356 >U4/U6 small nuclear ribon; SWP:NA; PDB:1X4QA GSSGSSGMALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCV 999975320000000000000000000000000000000000000 GKGMDKKKAADHLKPFLDDSTLRFVDKLFEAVEEGRSSRHSSGPS 000000000000000000000000000000000000123579999 SG 99 >Parp14 protein; SWP:NA; PDB:1X4RA GSSGSSGKSIRLAKEKESQADYISTYVEWQYIDKNITQCFDKMTN 999999999975322111000000000000000000000000000 MKLEVAWKAKKKDTVVQIHNQDFTVDLSTNTATAPQGQTFTVQRL 000000000000000000000000000000000000000000000 VKASGPSSG 001235679 >Zinc finger HIT domain co; SWP:NA; PDB:1X4SA GSSGSSGMEPAGPCGFCPAGEVQPARYTCPRCNAPYCSLRCYRTH 999988642100000000000000000000000000000000000 GTCAENFYSGPSSG 00000112345678 >hypothetical protein LOC5; SWP:NA; PDB:1X4TA GSSGSSGKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQ 876655432100000000000000000000000000000000000 NAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVSGPS 000000000000000000000000000000000000000012366 SG 89 >Hypothetical protein FLJ1; SWP:NA; PDB:1X4WA GSSGSSGSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLH 999875432100000000000000000000000000000000000 RLPEQHDCTFDHMGRGSGPSSG 0000000000012346788889 >Fibronectin type-III doma; SWP:NA; PDB:1X4XA GSSGSSGPDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEW 865421000000000000000000000000000110000000000 GGVEGSMQICYCGPGLSYEIKGLSPATTYYCRVQALSVVGAGPFS 000000000000000000000000000000000000000000000 EVVACVTPPSSGPSSG 0000000000124568 >biregional cell adhesion; SWP:NA; PDB:1X4YA GSSGSSGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFY 864321000000000000000000000000000000000000000 IYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDIKMQCFN 000000000000000000000000000000000000000000000 EGGESEFSNVMICETKARSGPSSG 000000000000000000124689 >biregional cell adhesion; SWP:NA; PDB:1X4ZA GSSGSSGSQPDHGRLSPPEAPDRPTISTASETSVYVTWIPRGNGG 999999998752000000000000000000000000000000000 FPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYK 000000000000000000000000000000000000000000000 FRVRALNMLGESEPSAPSRPYVVSGSGPSSG 0000000000000000000000001123468 >Galectin-4; SWP:NA; PDB:1X50A GSSGSSGHQQLNSLPTMEGPPTFNPPVPYFGRLQGGLTARRTIII 999999997532211000000000000000000000000000000 KGYVPPTGKSFAINFKVGSSGDIALHINPRMGNGTVVRNSLLNGS 000000000000000000000000000000010000000000000 WGSEEKKITHNPFGPGQFFDLSIRCGLDRFKVYANGQHLFDFAHR 000000000000000000000000000000000000000000000 LSAFQRVDTLEIQGDVTLSYVQISGPSSG 00000000000000000000000001246 >A/G-specific adenine DNA; SWP:NA; PDB:1X51A GSSGSSGPRKASRKPPREESSATCVLEQPGALGAQILLVQRPNSG 999976422332110000000000000000000000000001122 LLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGE 110000000000000000000000000000000000000000000 VVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAV 000001000000000000001100000001000000000000000 STAMKKVFRVYQGQSGPSSG 00000000000011467899 >Pelota homolog; SWP:NA; PDB:1X52A GSSGSSGTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQ 999987765543210000000000000000000000000000000 VEKANEAMAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTV 000000000000000000000000000000000000000000000 RIFSSLHVSGEQLSQLTGVAAILRFPVPSGPSSG 0000000000000000000000000000112345 >Activator of 90 kDa heat; SWP:NA; PDB:1X53A GSSGSSGIPTCKITLKETFLTSPEELYRVFTTQELVQAFTHAPAT 433221000000000000000000000000000000000000000 LEADRGGKFHMVDGNVSGEFTDLVPEKHIVMKWRFKSWPEGHFAT 000000000000000000000000000000000000000000000 ITLTFIDKNGETELCMEGRGIPAPEEERTRQGWQRYYFEGIKQTF 000000000000000000000000000000000000000000000 GYGASGPSSG 0000124568 >Endothelial differentiati; SWP:NA; PDB:1X57A GSSGSSGDRVTLEVGKVIQQGRQSKGLTQKDLATKINEKPQVIAD 877765543210000000000000000000000000000000000 YESGRAIPNNQVLGKIERAIGLKLRGKDIGKPIEKGPRAKSGPSS 000000000000000000000000000000000113679999999 G 9 >Hypothetical protein 4930; SWP:NA; PDB:1X58A GSSGSSGRKDFTKEEVNYLFHGVKTMGNHWNSILWSFPFQKGRRA 876665432100000000000000000000000000000000000 VDLAHKYHRLISGPSSG 00000000000136678 >Histidyl-tRNA synthetase; SWP:NA; PDB:1X59A GSSGSSGMAERAALEELVKLQGERVRGLKQQKASAELIEEEVAKL 987532100000000000000000000000000000000000000 LKLKAQLGPDESKQKFVLKTPKSGPSSG 0000000134689999999999999999 >Ephrin type-A receptor 1; SWP:NA; PDB:1X5AA GSSGSSGAESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYE 999987653311100000000000000000012233332210000 LHVLNQDEEWHQMVLEPRVLLTKLQPDTTYIVRVRTLTPLGPGPF 000000000000000000000000000000000000000000000 SPDHEFRTSPPSGPSSG 00000000000124689 >signal transducing adapto; SWP:NA; PDB:1X5BA GSSGSSGMPLFTANPFEQDVEKATNEYNTTEDWSLIMDICDKVGS 999999764221000000000000000000000000000000000 TPNGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLE 000000000000000000000000000000000000000000000 VCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWSEEFQKDPQFSL 000000000000000000000000000000000000000000000 ISATIKSMKEEGITFPPAGSQTSGPSSG 0000000000000000012345789999 >Protein disulfide-isomera; SWP:NA; PDB:1X5CA GSSGSSGPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAP 765321000000000000000000000000000000000000000 IWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASA 000000000000000000000000000000000000000000000 DRTVIDYNGERTLDGFKKFLESGGQSGPSSG 1000000000000000000000000123579 >Protein disulfide-isomera; SWP:NA; PDB:1X5DA GSSGSSGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEP 643321100000000000000000000000000000000000000 EWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF 000000000000000000000000000000000000000000000 QKGESPVDYDGGRTRSDIVSRALDLFSDNAPPPELLESGPSSG 0000000000000000000000000000001223579999999 >Thioredoxin domain contai; SWP:NA; PDB:1X5EA GSSGSSGNVRVITDENWRELLEGDWMIEFYAPWCPACQNLQPEWE 544322000000000000000000000000000000000000000 SFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYHCKDGEFR 000000000000000000000000000000000000000000000 RYQGPRTKKDFINFISDKEWKSIEPVSSWFSGPSSG 000000000000000000000000001111123568 >Neogenin; SWP:NA; PDB:1X5FA GSSGSSGEHAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDP 999999998654310000000000000000000000000000000 HGDNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIF 000000000000001000000000000000000000000000000 RVMAQNKHGSGESSAPLRVETQPESGPSSG 000000000000000000000000124579 >Neogenin; SWP:NA; PDB:1X5GA GSSGSSGRVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVSGN 999998776554321000000000000000000000000000001 GEIQNYKLYYMEKGTDKEQDVDVSSHSYTINGLKKYTEYSFRVVA 100000000000000000000000000000000000000000000 YNKHGPGVSTPDVAVRTLSDSGPSSG 00000000000000000000135689 >Neogenin; SWP:NA; PDB:1X5HA GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPA 999999999975321000000000000000000000000000000 TQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQLIEGLDRGTEY 000000000000000000000000000000000000000000000 NFRVAALTINGTGPATDWLSAETFESDLDETRVPEVSGPSSG 000000000000000000000000000112234567899999 >Neogenin; SWP:NA; PDB:1X5IA GSSGSSGPATDWLSAETFESDLDETRVPEVPSSLHVRPLVTSIVV 999999999999997653221000000000000000000000000 SWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDP 000000000000000000000000000000000000000000000 SSHYVITLKAFNNVGEGIPLYESAVTRPHTSGPSSG 000000000000000000000000000002345678 >Neogenin; SWP:NA; PDB:1X5JA GSSGSSGPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRY 655543210000000000000000000000000011110011000 YTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMVTKG 000000000011000000000000000000000000000000001 RRSSTWSMTAHGTTFELSGPSSG 00000000000000000135689 >Neogenin; SWP:NA; PDB:1X5KA GSSGSSGTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPS 999999987643210000000000000000100000000000000 EANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDT 000000000000000000000000000000000000000000000 PYYFKIQARNSKGMGPMSEAVQFRTPKASGPSSG 0000000000000000000000000000123456 >Ephrin type-A receptor 8; SWP:P29322; PDB:1X5LA GSSGSSGQAAPSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYE 999743100000000000000000000000000000000000000 IKYYEKDKEMQSYSTLKAVTTRATVSGLKPGTRYVFQVRARTSAG 000000001111000000000000000000000000000000000 CGRFSQAMEVETGKPSGPSSG 000000000000000235789 >Calcyclin-binding protein; SWP:Q9HB71; PDB:1X5MA GSSGSSGVVAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVP 999999999865331000000000000000000000000000000 TENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKV 000000000000000000000000000000000000000000000 KTDTVLILCRKKVENTRWDYLTQVEKECKEKSGPSSG 0000000000000000000000000000001358999 >Harmonin; SWP:Q9Y6N9; PDB:1X5NA GSSGSSGSPGNRENKEKKVFISLVGSRGLGCSISSGPIQKPGIFI 999999987543210000000000111100000000000000000 SHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSSRS 000010000000000000000000000000000000000000000 LTISIVAAAGRELFMTDRSGPSSG 000000000000001123445578 >RNA binding motif, single; SWP:P29558; PDB:1X5OA GSSGSSGLKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENM 999999999999999999864310000000000000000000000 LKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKF 000000000000000000000000000000000000000000000 IKTPPGVSAPTEPLLCKFSGPSSG 000000000000000000011246 >Negative elongation facto; SWP:P18615; PDB:1X5PA GSSGSSGERRAPRKGNTLYVYGEDMTPTLLRGAFSPFGNIIDLSM 999999988754310000000000000000000000000000000 DPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIARKQPML 000000000000000000000000000000000000000011233 DSGPSSG 5678999 >LAP4 protein; SWP:Q14160; PDB:1X5QA GSSGSSGEPARIEEEELTLTILRQTGGLGISIAGGKGSTPYKGDD 999987533100000000000001111000000000100001000 EGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEAL 000000000000000000000000000000000000000000000 RGAGTAVQMRVWRESGPSSG 00000000000000124578 >Glutamate receptor intera; SWP:Q9C0E4; PDB:1X5RA GSSGSSGGGQIVHTETTEVVLCGDPLSGFGLQLQGGIFATETLSS 999999875432100000000000000000000000000000000 PPLVCFIEPDSPAERCGLLQVGDRVLSINGIATEDGTMEEANQLL 000000000000000000000000000000000000000000000 RDAALAHKVVLEVEFDSGPSSG 0000000000000000123457 >Cold-inducible RNA-bindin; SWP:Q14011; PDB:1X5SA GSSGSSGMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVV 998877654321000000000000000000000000000000000 KDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAG 001110100000000000000000000000000000000000001 KSSDNRSGPSSG 234568999999 >Splicing factor 3B subuni; SWP:Q15427; PDB:1X5TA GSSGSSGIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTG 322211000000000000000000000000000000000001111 NSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKG 000000000000000000000000000000000000001345667 SGPSSG 899999 >Splicing factor 3B subuni; SWP:Q15427; PDB:1X5UA GSSGSSGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNT 999999996531100000000000000000000000000000000 HMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVN 000001100001000000000000000000000000000000000 KASAHNKNLSGPSSG 000012356789999 >PcFK1; SWP:P83591; PDB:1X5VA ACGILHDNCVYVPAQNPCCRGLQCRYGKCLVQV 100000000000010000000000000000002 >Zinc finger protein 64, i; SWP:NA; PDB:1X5WA GSSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSF 999999976456777865433343133323434443433355443 DTKQPSNLSKHMKKFHGDMSGPSSG 2243332112222344466789999 >Fibronectin type-III doma; SWP:NA; PDB:1X5XA GSSGSSGPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILE 864321000000000000000000000000011112211000000 MEEETSGYGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKS 001233321000000000000000000000000000000000000 NPSEVVEFTTCPDSGPSSG 0000000000001246799 >myosin binding protein C,; SWP:NA; PDB:1X5YA GSSGSSGPTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLV 986421000000000000000000000000000001110000000 EYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRVVGVNIAG 000000000000000000000000000000000000000000000 RSEPATLLQPVTIRESGPSSG 000000000000000124689 >Receptor-type tyrosine-pr; SWP:NA; PDB:1X5ZA GSSGSSGDIQVITQTGVPGQPLNFKAEPESETSILLSWTPPRSDT 999999999997642100000000000000000000000000000 IANYELVYKDGEHGEEQRITIEPGTSYRLQGLKPNSLYYFRLAAR 000000000000000000000000000000000000000000000 SPQGLGASTAEISARTMQSSGPSSG 0000000000000000000123568 >Sporulation-specific N-ac; SWP:NA; PDB:1X60A LKKTSSSGLYKVQIGAFKVKANADSLASNAEAKGFDSIVLLKDGL 999753100000000000000000000000000000000000000 YKVQIGAFSSKDNADTLAARAKNAGFDAIVILES 0000000000000000000000000000000001 >Thyroid receptor interact; SWP:NA; PDB:1X61A GSSGSSGCGGCGEDVVGDGAGVVALDRVFHVGCFVCSTCRAQLRG 875311000000000011110000000000000000000000010 QHFYAVERRAYCEGCYVATLESGPSSG 000000000000000000000124567 >C-terminal LIM domain pro; SWP:NA; PDB:1X62A GSSGSSGSIGNAQKLPMCDKCGTGIVGVFVKLRDRHRHPECYVCT 999999999864311000000000000000000000000000000 DCGTNLKQKGHFFVEDQIYCEKHARERVSGPSSG 0000000000000000000000000000123589 >Skeletal muscle LIM-prote; SWP:NA; PDB:1X63A GSSGSSGKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFT 999999997643200000000000000000000000000000000 CSNCKQVIGTGSFFPKGEDFYCVTCHETKFASGPSSG 0000000000000000100000000000000124579 >Alpha-actinin-2 associate; SWP:NA; PDB:1X64A GSSGSSGVRAPVTKVHGGAGSAQRMPLCDKCGSGIVGAVVKARDK 999999999999999999996420000000000000000000000 YRHPECFVCADCNLNLKQKGYFFVEGELYCETHARARTSGPSSG 00000000000000000000000000000000000000023457 >UNR protein; SWP:NA; PDB:1X65A GSSGSSGREMGVIAAMRDGFGFIKCVDRDVRMFFHFSEILDGNQL 655431000000000000000000000000000000000000000 HIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSFHSHSGPSSG 00000000000112223210000000000000001345667789 >Friend leukemia integrati; SWP:NA; PDB:1X66A GSSGSSGPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYSL 999999999866442110000000000000000000000000000 MEIDTSFFQNMDGKELCKMNKEDFLRATTLYNTEVLLSHLSYLRE 000000000000000000000000000000000000000000000 SSSGPSSG 01346899 >Drebrin-like protein; SWP:NA; PDB:1X67A GSSGSSGMAANLSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSN 999864210010000000000000000000000000000000000 DIRVAGTGEGGLEEMVEELNSGKVMYAFCRVKDPNSGLPKFVLIN 000000000000000000000000000000000000000000000 WTGEGVNDVRKGACASHVSTMASFLKGAHVTINARAEEDVEPECI 000000000000000000000000000000000000000000000 MEKVASGPSSG 00000011357 >FHL5 protein; SWP:NA; PDB:1X68A GSSGSSGCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSL 986431000000000112111000000000000000000000000 VGKGFLTQNKEIFCQKCGSGMDTDISGPSSG 0100000000000000001235678999999 >LIM domain kinase 2; SWP:NA; PDB:1X6AA GSSGSSGKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACM 999998765443321111111111222111111111111110000 SCKVIIEDGDAYALVQHATLYCGKCHNEVVSGPSSG 001000111100000121000000000000123579 >Rho guanine exchange fact; SWP:NA; PDB:1X6BA GSSGSSGWQGLSSKGDLPQVEITKAFFAKQADEVTLQQADVVLVL 999877666554321100000000000000000000000000000 QQEDGWLYGERLRDGETGWFPEDFARFISGPSSG 0000000000000000000000000000012346 >Tyrosine-protein phosphat; SWP:NA; PDB:1X6CA GSSGSSGWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVL 976421000000000000000000000000000000000000000 SVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLTDLVE 000000000000000000000000000000000000000000000 HFKKTGIEEASGAFVYLRQPYYSGPSSG 0000000000000000000000112468 >Interleukin-16; SWP:NA; PDB:1X6DA GSSGSSGATLKQLDGIHVTILHKEEGAGLGFSLAGGADLENKVIT 999999997653210000000000000000000000000000000 VHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQA 000000000000000000000000000000000000000000000 REPRQAVIVTRKLTPEAMPDLNSSGPSSG 00000000000011233568999999999 >Zinc finger protein 24; SWP:NA; PDB:1X6EA GSSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKC 999999999999765679899774433431332233455434334 LECGKAFSQNSGLINHQRIHTSGPSSG 666643233343122222344568999 >Megakaryocyte-associated; SWP:NA; PDB:1X6GA GSSGSSGRMPTRRWAPGTQCITKCEHTRPKPGELAFRKGDVVTIL 999987665421000000000000000000000000000000000 EACENKSWYRVKHHTSGQEGLLAAGALRERSGPSSG 001211000000000000000000000000135689 >Transcriptional repressor; SWP:NA; PDB:1X6HA GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVP 999999986542100000111100000000000000000000000 AAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSSG 00000000000000000000000001112356899999999 >hypothetical protein HP02; SWP:NA; PDB:1X93A TRAVSLYFSDEQYQKLEKMANEEEESVGSYIKRYILKALRKIEMR 1000000000000000000000000000000000000000012-- GSHHHHHHGS ---------- >hypothetical membrane pro; SWP:NA; PDB:1X9BA RNLSDRAKFESMINSPSKSVFVRNLNELEALAVRLGKSYRIQLDQ 532000000000000000000000000000000000000000000 AKEKWKVK 00000012 >Hypothetical UPF0054 prot; SWP:NA; PDB:1XAXA MGSVLVDLQIATENIEGLPTEEQIVQWATGAVQPEGNEVEMTVRI --1000000011221111100000000000001121110000000 VDEAESHELNLTYRGKDRPTNVLSFPFECPDEVELPLLGDLVICR 000000000000110000110000001112121110000000000 QVVEREASEQEKPLMAHWAHMVVHGSLHLLGYDHIEDDEAEEMES 000000000000000000000000000001011111100000000 LETQIMQGLGFDDPYLAEK 00000000001-------- >Pardaxin P-4; SWP:NA; PDB:1XC0A GFFALIPKIISSPLFKTLLSAVGSALSSSGGQE 111000000000000000000000000011234 >Tctex1 Light Chain protei; SWP:NA; PDB:1XDXA MEGVDPAVEEAAFVADDVSNIIKESIDAVLQNQQYSEAKVSQWTS 421101100000010000000000000000000000000000000 SCLEHCIKRLTALNKPFKYVVTCIIMQKNGAGLHTAASCWWDSTT 000000000000000000000000000111111111111111100 DGSRTVRWENKSMYCICTVFGLAI 110000000011000000000011 >chemotaxis-inhibiting pro; SWP:NA; PDB:1XEEA NSGLPTTLGKLDERLRNYLKKGTKNSAQFEKMVILTENKGYYTVY 765321000000000000001111111000000000000000000 LNTPLAEDRKNVELLGKMYKTYFFKKGESKSSYVINGPGKTNEYA 000000000000000000000000001100000000000100111 Y 2 >Wilms' Tumor Protein; SWP:NA; PDB:1XF7A KPFQCKTCQRKFSRSDHLKTHTRTHTGEK 00000000000000000000000001135 >Thioredoxin h1; SWP:NA; PDB:1XFLA MGHHHHHHLEMASEEGQVIACHTVETWNEQLQKANESKTLVVVDF ----------43211100000000000000000000000000000 TASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQ 000000000000000000000010000000000000000000000 AMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 0000000000000000000000000000000002 >Nitrogen Fixation Protein; SWP:NA; PDB:1XHJA MPTENPTMFDQVAEVIERLRPFLLRDGGDCTLVDVEDGIVKLQLH 643221100000000000000000001000000001100000000 GACGTCPSSTITLKAGIERALHEEVPGVIEVEQVFLEHHHHHH 1122211110010000000111111111000000123689999 >Hypothetical UPF0131 prot; SWP:NA; PDB:1XHSA MRIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSLGHYPGAV 000000111232243222121000000000000000001100000 PGNGTVHGEVYRIDNATLAELDALRTRGGEYARQLIQTPYGSAWM 000000000000000000000011112210000000000000000 YVYQRPVDGLKLIESGDWLDRDKLEHHHHHH 00011111110000000111345-------- >NifU-like protein; SWP:NA; PDB:1XJSA MSFNANLDTLYRQVIMDHYKNPRNKGVLNDSIVVDMNNPTCGDRI 986432110000000010011111000010000000001111100 RLTMKLDGDIVEDAKFEGEGCSISMASASMMTQAIKGKDIETALS 000000000000000000000000000000000000000000000 MSKIFSDMMQGKEYDDSIDLGDIEALQGVSKFPARIKCATLSWKA 000001111122322212111100000100111100000000000 LEKGVAKEEGGN 000001112346 >Ran-binding protein 2; SWP:NA; PDB:1XKEA GSGEEDEKVLYSQRVKLFRFDAEVSQWKERGLGNLKILKNEVNGK 543110000000000000000110000000000000000011111 LRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDG 000000000000000000000000000001110000000001111 DAKLEQLAAKFKTPELAEEFKQKFEECQRLLLDIPLQTPK 1100000000000000000000000000001111123467 >Peptide methionine sulfox; SWP:NA; PDB:1XM0A MAYNKEEKIKSLNRMQYEVTQNNGTEPPFQNEYWDHKEEGLYVDI 755433211221111111111122222222111222221100011 VSGKPLFTSKDKFDSQCGWPSFTKPIEEEVEEKLDTSHGMIRTEV 111101012321122332210011101111111112322111011 RSRTADSHLGHVFNDGPGPNGLRYCINSAALRFVPKHKLKEEGYE 112222111100012232211000000000000011111121111 SYLHLFNKLEHH 111111344578 >Chimeric CD3 mouse Epsilo; SWP:NA; PDB:1XMWA DDAENIEYKVSISGTSVELTCPLDSDENLKWEKNGQELPQKHDKH 754322000000000000000000000000000000001100000 LVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAA 000000000000000000000000000000000012457999999 KKDDAKKDDAKKDGSQTNKAKRALEVLEAEDKVILKCNSSITLLQ 999999999999999766442100000000000000000000000 GTAGQEVSDNKTLNLGKRIEDPRGMYQCGENAKSFTLQVYYRM 0000001110000000000000000000122210000000013 >BH1534 unknown conserved; SWP:NA; PDB:1XN5A MTRLPDIKKEVRFNAPIEKVWEAVSTSEGLAFWFMENDLKAETGH 421000000000000000000000000000000000000000000 HFHLQSPFGPSPCQVTDVERPIKLSFTWDTDGWSVTFHLKEEENG 000000000000000000000000000001100000000000000 TIFTIVHSGWKQGDTKVEKAGAESAVVHERMDRGWHDLVNERLRQ 000000000000111011111000000000000000000000000 IVELEHHHHHH 000-------- >hypothetical protein BC47; SWP:NA; PDB:1XN6A MEQQNTLNDIKQTIVFNASIQKVWSVVSTAEGIASWFMPNDFVLE 543321000000000000000000000000000000000000000 VGHEFHVQSPFGPSPCKVLEIDEPNHLSFSWDTDGWVVSFDLKDL 000000001111000000000000000000000000000000000 GDNKTEFTLIHGGWKHPDEILPKANAKSSIIRDRMSGGWVAIVNE 000000000000000000000110000000000000000000000 KLKKVVEG 00000000 >Hypothetical protein yhgG; SWP:NA; PDB:1XN7A MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMGK 210000000000000000000000000000000000000000000 AVRIQEEPDGCLSGSCKSCPEGKACLREWWALR 000000011233455677654321000000000 >30S ribosomal protein S24; SWP:NA; PDB:1XN9A MDIKIIKDKKNPLLNRRELDFIVKYEGSTPSRNDVRNKLAAMLNA 000000000000000000000000000000000000000000000 PLELLVIQRIKTEYGMQESKGYAKLYEDADRMKQVEQEYVLKRNA 000000000000001000000000000000000000000112344 VPGSETEGEEA 56788999999 >hypothetical protein PF04; SWP:NA; PDB:1XNEA MKVYRLYLKDEYLEMVKSGKKRIEVRVAYPQLKDIKRGDKIIFND 000000000000000000000000010001000000000000000 LIPAEVVEVKKYETFRQVLREEPIDKIFPDKPSFEKALKRFHNMY 000000000000100000000000000000000000000001112 PKWKEYRYGVLAIKFRVLGRDKE 33333321100000000001134 >At1g01470; SWP:NA; PDB:1XO8A MASLLDKAKDFVADKLTAIPKPEGSVTDVDLKDVNRDSVEYLAKV 976789999997754321112100000000000010000000000 SVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTAL 000001000000000000000000000000000000000000000 DIPVVVPYSILFNLARDVGVDWDIDYELQIGLTIDLPVVGEFTIP 000000000000000000000000000000000000000000000 ISSKGEIKLPTFKDFF 0000000000011112 >hypothetical protein At3g; SWP:NA; PDB:1XOYA SSAESASQIPKGQVDLLDFIDWSGVECLNQSSSHSLPNALKQGYR 654433211111000000001001000001111100000001111 EDEGLNLESDADEQLLIYIPFNQVIKLHSFAIKGPEEEGPKTVKF 112110001110000000000000000000000000000000000 FSNKEHMCFSNVNDFPPSDTAELTEENLKGKPVVLKYVKFQNVRS 001111101100111000000000000000000000111110000 LTIFIEANQSGSEVTKVQKIALYGST 00000000011010000000000001 >XPA; SWP:P23025; PDB:1XPA MEFDYVICEECGKEFMDSYLMNHFDLPTCDNCRDADDKHKLITKT 000000000000000000000000000000000000000000000 EAKQEYLLKDCDLEKREPPLKFIVKKNPHHSQWGDMKLYLKLQIV 000000000000000000000000000000000000000000000 KRSLEVWGSQEALEEAKEVRQEN 00000000000000000000000 >hypothetical protein XC97; SWP:NA; PDB:1XS3A MRKRPLDAETIRKLIESGLPEARVDVQGEDGVHFEATVVSPAFVG 865331000000000000000000000000000000000000000 KAPLARHRMVYATLGELMGGAIHALQLKTLTPDEA 00000000000000000000100000000000000 >UPF0269 protein yggX; SWP:NA; PDB:1XS8A MSRTIFCTYLQRDAEGQDFQLYPGELGKRIYNEISKDAWAQWQHK 210000000000000011111110000000000000000000000 QTMLINEKKLNMMNAEHRKLLEQEMVSFLFEGKDVHIEGYTPEDK 000000000001100000000000000000011111123445667 K 8 >Bis(5'-nucleosyl)-tetraph; SWP:NA; PDB:1XSAA GPLGSMALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTP 753110000000000000000011110000000000000000000 PKGHVEPGEDDLETALRATQEEAGIEAGQLTIIEGFKRELNYVAR 000000000000000000000000000000000000000000001 NKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQFKE 100000000000000000000000000000000000000000000 MKAALQEGHQFLCSIEAL 000000000000000001 >Probable resuscitation-pr; SWP:NA; PDB:1XSFA NVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAI 999999999999999999876432110000000000000000000 NTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTR 000000000000000000000000000000000000000000000 LRQGWGAWPVCAARAGAR 000000000000000001 >prion protein; SWP:NA; PDB:1XU0A GSGYNKQWKPPKSKTNMKSVAIGAAAGAIGGYMLGNAVGRMSYQF ----------------------------11101010011000111 NNPMESRYYNDYYNQMPNRVYRPMYRGEEYVSEDRFVRDCYNMSV 100000000000000000000000011111100000000000000 TEYIIKPAEGKNNSELNQLDTTVKSQIIREMCITEYRRGS 0000000111111100000000000000000000000111 >Variant surface glycoprot; SWP:NA; PDB:1XU6A GSHMLEVLTQKHKPAESQQQAAETEGSCNKKDQNECKSPCKWHND 999999999999999764331100000000000000000000001 AENKKCTLDKEEAKKVADETAKDGKTGNTNTTGSS 11100000000000000013456899999999999 >Complement C5; SWP:NA; PDB:1XWEA GSHMADCGQMQEELDLTISAETRKQTACKPEIAYAYKVSITSITV 753211111000100100000000000000000000000000000 ENVFVKYKATLLDIYKTGEAVAEKDSEITFIKKVTCTNAELVKGR 110000000000000000011000000000000001110000000 QYLIMGKEALQIKYNASFRYIYPLDSLTWIEYWPRDTTCSSCQAF 000000000111345542110000000000000001113332110 LANLDEFAEDIFLNGC 0000000000000111 >Autoimmune regulator; SWP:NA; PDB:1XWHA GAMAQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSG 875321000000000000000000000000000000000000010 TWRCSSCLQATVQEVQPRAEE 000000000012468999999 >Peptidyl-prolyl cis-trans; SWP:NA; PDB:1XWNA MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARR 999999875321000000000000000000000000000000000 GYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDL 000000000000110000011224443211101110010011111 KFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQG 111100000000111100000000000001100000000000000 IGMVNRVGMVETNSQDRPVDDVKIIKAYPSGLEHHHHHH 0000000000101110000110000000012-------- >Major prion protein; SWP:NA; PDB:1XYXA VVGGLGGYMLGSAMSRPMIHFGNDWEDRYYRENMYRYPNQVYYRP 111101000000000000000000000000000000000000000 VDQYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVKMMERVV 012110000000000000000000000000000000000000000 EQMCVTQYQKESQAYYDGRRSS 0000000000000000112356 >Antifreeze peptide SS-3; SWP:NA; PDB:1Y03A GSMNAPARAAAKTAADALAAAKKTAADAAAAAAAA 76532221111111111010000000011112234 >Elastase inhibitor; SWP:NA; PDB:1Y1BA KPDCPLICTMQYDPVCGSDGITYGNACMLLGASCRSDTPIELVHK 531111000110000000000000000000000001100000000 GRC 000 >Copper-transporting ATPas; SWP:NA; PDB:1Y3JA NSSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEV 210000000111211110000001012110000110001100000 RYNPAVIQPPMIAEFIRELGFGATVIENIEGR 00000000000000000001100000124679 >RNA polymerase II transcr; SWP:NA; PDB:1Y5OA PSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTI 210000000000000000000000000000000000000000000 DKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFS 000000000000000000001234567899999864311000000 FNNRTVMDNIKMTLQQIISRYKDAD 0000000000000000000000001 >Phosphorelay protein luxU; SWP:NA; PDB:1Y6DA MNTDVLNQQKIEELSAEIGSDNVPVLLDIFLGEMDSYIGTLTELQ 111100000000000000000000000000000000000000000 GSEQLLYLKEISHALKSSAASFGADRLCERAIAIDKKAKANQLQE 100000000000000000000000000000000000000011111 QGMETSEMLALLHITRDAYRSWTN 111000000000000000000011 >Excisionase from transpos; SWP:NA; PDB:1Y6UA AGHMKQTDIPIWERYTLTIEEASKYFRIGENKLRRLAEENKNANW --------0000000000000000000000000000000000000 LIMNGNRIQIKRKQFEKIIDTLDAI 0000000000000000000000--- >Agouti Signaling Protein; SWP:NA; PDB:1Y7JA KKVVRPRTPLSAPCVATRNSCKPPAPACCDPCASCYCRFFRSACY -------------11101001233332111100000001110000 CRVLSLNC 00012333 >Zinc finger protein 174; SWP:NA; PDB:1Y7QA GSKNCPDPELCRQSFRRFCYQEVSGPQEALSQLRQLCRQWLQPEL 999987653322222222222222221111110011011111222 HTKEQILELLVMEQFLTILPEEIQARVRHRCLMSSKEIVTLVEDF 211111111100110011111111112223322111100000111 HRASKKPK 11256899 >Major vault protein; SWP:NA; PDB:1Y7XA GSHMQVVLPNTALHLKALLDFEDKDGDKVVAGDEWLFEGPGTYIP 753111101000000000000122332100000000000011000 RKEVEVVEIIQATIIRQNQALRLRARKECWDRDGKERVTGEEWLV 000000000000000111000000000100001111001000000 TTVGAYLPAVFEEVLDLVDAVIL 01111101000000000001247 >Unc-13 homolog A; SWP:NA; PDB:1Y8FA GSPGISGGGGGIQHNFEVWTATTPTYCYECEGLLWGIARQGMRCT ------------000000000000000000000001000000000 ECGVKCHEKCQDLLNADCKLN 000000000000000000--- >Fis1; SWP:NA; PDB:1Y8MA MTKVDFWPTLKDAYEPLYPQQLEILRQQVVSEGGPTATIQSRFNY 865431000000000000000000000000000000000000000 AWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKL 000000000000000000000000000100000000000000000 GEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKIQKETLKGVVVA 000000000000000111110000000000000001123467999 GGVHHHHHH 999999999 >Sec1 family domain contai; SWP:NA; PDB:1Y9JA GSPGISGGGGGILVGSKMAASIRERQTVALKRMLNFNVPHVKNSP -------------------00000000000000000001111222 GEPVWKVLIYDRFGQDIISPLLSVKELRDMGITLHLLLHSDRDPI 110000000000000000000000000000000000000000000 RDVPAVYFVMPTEENIDRLCQDLRNQLYESYYLNFISAISRSKLE 000000000000000000000000000000000000000000000 DIANAALAANAVTQVAKVFDQYLN 000000000000000000000000 >At1g16640; SWP:NA; PDB:1YELA GSMADTGEVQFMKPFISEKSSKSLEIPLGFNEYFPAPFPITVDLL --6532110000000000000000000000001110100000000 DYSGRSWTVRMKKRGEKVFLTVGWENFVKDNNLEDGKYLQFIYDR 011100000000001100000000000000000000000000011 DRTFYVIIYGHNMC 10000000023346 >hypothetical protein MM13; SWP:NA; PDB:1YEZA MFREESRSVPVEEGEVYDVTIQDIARQGDGIARIEGFVIFVPGTK 986554221000000000000000011100000000000000000 VGDEVRIKVERVLPKFAFASVVE 00000000000000000000001 >hypothetical protein BSU3; SWP:NA; PDB:1YGMA GSHGMFCTFFEKHHRKWDILLEKSTGVMEAMKVTSEEKEQLSTAI ------123223222100000001111112111110000000000 DRMNEGLDAFIQLYNESEIDEPLIQLDDDTAELMKQARDMYGQEK 000000001011111212223332211011000000001111111 LNEKLNTIIKQILSISVSEEGEKELVPR 1000000000011111122243223568 >UPF0269 protein yggX; SWP:NA; PDB:1YHDA MGSRTIFCTFLQREAEGQDFQLYPGELGKRIYNEISKEAWAQWQH 421000000000000000000000000000000000000000000 KQTMLINEKKLNMMNAEHRKLLEQEMVNFLFEGKEVHIEGYTPED 000000000000000000000000000000000112357899999 KKLEHHHHHH 99-------- >Calcium-dependent cell ad; SWP:NA; PDB:1YHPA SVDANKVKFFFGKNCTGESFEYNKGETVRFNNGDKWNDKFMSCLV 100000000001111110000000000000111110000000000 GSNVRCNIWEHNEIDTPTPGKFQELAQGSTNNDLTSINGLSKFQV 000000000000001111110000000000001000110000000 LPGAFQWAVDVKIVNKVNSTAGSYEMTITPYQVDKVACKDGDDFV 000000000000000111111000000000000100000000100 QLPIPKLTPPDSEIVSHLTVRQTHTPYDYVVNGSVYFKYSPTTGQ 000011100000000000000011111100000000000011000 VTVIKKDETFPKNMTVTQDDNTSFIFNLNSEK 00000011001110000000100000001111 >Itchy E3 ubiquitin protei; SWP:NA; PDB:1YIUA GAMGPLPPGWEKRTDSNGRVYFVNHNTRITQWEDPRS 6531000000000000000000000000000000011 >Copper-transporting ATPas; SWP:NA; PDB:1YJRA MGDGVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAH 321100000000011100000000000001000000000000000 IKYDPEIIGPRDIIHTIESLGFEPSLVKIE 000000000000000000000000001235 >monothiol glutaredoxin yd; SWP:NA; PDB:1YKAA MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACGE 653100000000000000000000000000000000000000000 RFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEM 000000000000000000000000000000000000000000000 YQRGELQQLIKETAAKYKSEEPDAE 0000000000000000001001011 >Sulfite reductase [NADPH]; SWP:NA; PDB:1YKGA ATPAPAAEMPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVN -----------0000000000000000000000000000000000 AGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPK 000000000000000000000000000000000000000111111 LENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDAD 110000000000000000000000000000000000000000000 VEYQAAASEWRARVVDALKSRAPVAAPSQSVA 0000000000000000000112---------- >Replication factor-A prot; SWP:NA; PDB:1YNXA TRPIFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQRGDGKLFNVN 211111111000011100000000000000012222210000000 FLDTSGEIRATAFNDFATKFNEILQEGKVYYVSKAKLQPAKPQFT 000000000000000000000000000000000000001122232 NLTHPYELNLDRDTVIEECFDESN 222111000011100000124579 >Kti11p; SWP:NA; PDB:1YOPA MVSTYDEIEIEDMTFEPENQMFTYPCPCGDRFQIYLDDMFEGEKV 531000000000000010000000000000000000000000000 AVCPSCSLMIDVVFDKEDLAEYYEEAGIHPPEPIAAAA 00000000000000000000000000112478999999 >cell-division initiation; SWP:NA; PDB:1YR1A GSEWRRIAYVYDRQTFFPLLENGRLLKQEGTKTAPSDAPVLVGWK 310000000000000000000000000000000000000000000 DGDAIAEMTGQLAELPAAVLGAMSEIHYKPTREYEDRVIVYMNDG 000000000000000000000000000000000000000000000 YEVSATIRQFADKLSHYPAIAAALDRNVK 00000000000000000000000000246 >lipoprotein; SWP:NA; PDB:1YS5A MQSHSALTAFQTEQIQDSEHSGKMVAKRQFRIGDIAGEHTSFDKL 999999999986467764334345899999998643221122222 PEGGRATYRGTAFGSDDAGGKLTYTIDFAAKQGNGKIEHLKSPEL 222211111000011111000011111121111100011111111 NVDLAAADIKPDGKRHAVISGSVLYNQAEKGSYSLGIFGGKAQEV 000111111122222211111100111110000011112211111 AGSAEVKTVNGIRHIGLAAKQLEHHHHHH 000000111111100000011-------- >DNA-binding protein SATB1; SWP:NA; PDB:1YSEA GSHVSRSMNKPLEQQVSTNTEVSSEIYQWVRDELKRAGISQAVFA ------------------421000000000000000000000000 RVAFNRTQGLLSEILRKEEDPKTASQSLLVNLRAMQNFLQLPEAE 000000010000000000000010000000000000000000000 RDRIYQDERERSLNAASAMGPAPLISTPPSRPPQVKTATIATERN 0000001234568999----------------------------- GKPENN ------ >Calcyclin-binding protein; SWP:NA; PDB:1YSMA MASVLEELQKDLEEVKVLLEKSTRKRLRDTLTSEKSKIETELKNK 100000000000000000000000000000000000000000000 MQQKSQKKPELDNEKPAAVVAPLTTGYTVKIS 0123568999---------------------- >Replicase polyprotein 1ab; SWP:NA; PDB:1YSYA GHSKMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQLHNDILLAK 432112211111000000001111122100000000000000000 DTTEAFEKMVSLLSVLLSMQGAVDINRLCEEMLDNRATLQ 0000000000000000000001110000011100000111 >TOPOISOMERASE I; SWP:NA; PDB:1YUA_ MNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVFLAANTFPK 865432222210000000000110000000012100000000000 SRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSR 000000000000000000000000000000001110000000000 KTKQQYVSSEKDGKATGWSAFYVDGKWVEGKK 00000000001111100000000000000012 >MrR5; SWP:NA; PDB:1YVCA MAFGKPAMKNVPVEAGKEYEVTIEDMGKGGDGIARIDGFVVFVPN 999976442100000000000000000111000000000000000 AEKGSVINVKVTAVKEKFAFAERVL 0000000000000000000000000 >Hypothetical UPF0213 prot; SWP:NA; PDB:1YWLA MENKKSHYFYVLLCQDGSFYGGYTTEPERRLTEHNSGTGAKYTRL 311111000000011111100000100000000111123445566 AKRRPVIMIHTEKFETRSEATKAEAAFKKLTRKQKEQYLKTFHLE 432111001110101111000000000010010000011111111 HHHHHH 234557 >hypothetical protein PA46; SWP:NA; PDB:1YWUA MGSSHHHHHHSSGRENLYFQGHMSDQHDERRRFHRIAFDADSEIL ----------------------99999987643211000000000 QGERRWEVLLHDVSLHGILVGQPQDWNGDPQRPFEARLYLGLDVL 011000000000000000000011112211100000000001100 IRMEISLAWARDGLLGFECQHIDLDSISHLRRLVELNLGDEELLE 000000000001000000000000000000000000001000000 RELALLVSAHDDGS 000000011123-- >Hypothetical protein PA47; SWP:NA; PDB:1YWWA MGSSHHHHHHSSGLVPRGSHMNSDVIKGKWKQLTGKIKERWGDLT --------------------5321000100000000000010000 DDDLQAADGHAEYLVGKLQERYGWSKERAEQEVRDFSDRL 0000011110000000000000000000000000000011 >30S ribosomal protein S24; SWP:NA; PDB:1YWXA MDISIISDRNNPLLQRREIKFTVSFDAATPSIKDVKMKLVAVLNA 100000000000000000000000001100000000000000000 NKQVLVVDTLDQIFGKLEAEGYAKIYNDEKAMATIETKSVLEKNK 000000000000000000000000000000000000000000001 IEEEAEAEVAEE 236999999999 >hypothetical protein PA20; SWP:NA; PDB:1YWYA MSIEIDSEQGVCSVEIEGSRHRAPVDSLRIGTDAEARLSVLYIDG 000000000000000111110000000000000000000000000 KRLHISEEDAQRLVVAGAEDQRRHLMADD 00000000000000000000001223457 >hypothetical protein ysnE; SWP:NA; PDB:1YX0A MHIKIDDLTGRQVVSLVNEHLHSMTLMSPPESIHALGLEKLRGPE 100000011110011011111234578889988754322111110 ITFWSAWEGDELAGCGALKELDTRHGEIKSMRTSASHLRKGVAKQ 000000001100000000000000000010001222212210000 VLQHIIEEAEKRGYERLSLETGSMASFEPARKLYESFGFQYCEPF 000000000000000000001111111000000000000011111 ADYGEDPNSVFMTKKLLEHHHHHH 1122112111100000-------- >hypothetical protein DsrC; SWP:NA; PDB:1YX3A MGSSHHHHHHSSGLVPRGSHMADTIEVDGKQFAVDEEGYLSNLND --------------------2100000100000001000000010 WVPGVADVMAKQDNLELTEEHWDIINFLREYYEEYQIAPAVRVLT 000000000000000000000000000000000000000000000 KAVGKKLGKEKGNSKYLYSLFPYGPAKQACRFAGLPKPTGCV 000000111111100000000000000000000001011346 >26S proteasome non-ATPase; SWP:NA; PDB:1YX4A MGHHHHHHHHHHSSGHIEGRHMLGLGASDFEFGVDPSADPELALA --------------------9999999999999999999999998 LRVSMEEQRQRQEEEARRAAAASAAEAGIATTGTEDSDDALLKMT 877666555555455555666778899999998888767655566 ISQQEFGRTGLPDLSSMTEEEQIAYAMQMSLQGAEFGQAESA 668888999999999999999998899999999999999999 >vacuolar protein sorting; SWP:NA; PDB:1YXRA MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKY 210000000000000000000000000000000000000000000 EAHSDKAKESIRAKCVQYLDRAEKLKDYLRSK 00000000000000000000000000000000 >putative late embryogenes; SWP:NA; PDB:1YYCA GHHHHHHLEASADEKVVEEKASVISSLLDKAKGFFAEKLANIPTP 999998665321111000000000000000000011111111100 EATVDDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQISYILKSA 000000000111111100000000000011000100000000001 TRTIASGTIPDPGSLVGSGTTVLDVPVKVAYSIAVSLMKDMCTDW 110000000000000110000000000000000111111111111 DIDYQLDIGLTFDIPVVGDITIPVSTQGEIKLPSLRDFF 000000000000011110000000000000101111112 >Minor tail protein U; SWP:NA; PDB:1Z1ZA MKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTG -00000000000000000000000000000000000000000000 AEYTGEELDSDTWQAELHIEVFLPAQVPDSELDAWMESRIYPVMS 000000000000000000000000000000000000000000000 DIPALSDLITSMVASGYDYRRDDDAGLWSSADLTYVITYEM 0000000000000000000000000000000000000000- >CRK-associated substrate; SWP:NA; PDB:1Z23A GSGREPLELEVAVETLARLQQGVSTTVAHLLDLVGSASGPGGWRS 975421100000000000000000000000000012234667776 TSEPQEPPVQDLKAAVAAVHGAVHELLEFARSAVSSATHTSDRTL 654222210000000000000000000000000001122222100 HAKLSRQLQKMEDVYQTLVVHGQVLDSGRGGPGFTLDDLDRLVAC 000000000000000000000000001233331100000000000 SRAVPEDAKQLASFLHGNASLLFRRTKA 0000000000000000000000013467 >Natural killer cell recep; SWP:NA; PDB:1Z2KA DCPDSSEEVVGVSGKPVQLRPSNIQTKDVSVQWKKTEQGSHRKIE -10000000000000000000001111100000000012110000 ILNWYNDGPSWSNVSFSDIYGFDYGDFALSIKSAKLQDSGHYLLE 000000000000010000000000100000000000000000000 ITNTGGKVCNKNFQLLILD 0122332100000000001 >LM5-1; SWP:NA; PDB:1Z2QA GPLGSMGEKQSKGYWQEDEDAPACNGCGCVFTTTVRRHHCRNCGY 999999987642000000000000000000000000000000000 VLCGDCSRHRAAIPMRGITEPERVCDACYLALRSSNMAG 000000000000000000000000000000000023589 >Tor inhibition protein; SWP:Q2EES9; PDB:1Z4HA MQHELQPDSLVDLKFIMADTGFGKTFIYDRIKSGDLPKAKVIHGR 210000000000000000000000000000000000000001111 ARWLYRDHCEFKNKLLSRANG 000000000000000001235 >RC-RNase 3; SWP:Q9DFY7; PDB:1Z5FA DWETFQKKHLTDTKKVKCDVEMAKALFDCKKTNTFIYALPGRVKA 000000000000000000000000000000000000000000000 LCKNIRDNTDVLSRDAFLLPQCDRIKLPCHYKLSSSTNTICITCV 000000000000000000000000000000000000000000000 NQLPIHFAGVGSCP 00000000000001 >TFIIH basal transcription; SWP:Q13888; PDB:1Z60A LDAFQEIPLEEYNGERFCYGCQGELKDQHVYVCAVCQNVFCVDCD 222100000000111100000000000000000111100000000 VFVHDSLHSCPGCI 00112111111111 >Vitamin K-dependent prote; SWP:P07225; PDB:1Z6CA KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDI 322211121111000011112222111100100000000000000 DECSENMCAQLCVNYPGGYTCYCDGKKGFKLAQDQKSCEVVS 000000001000000000000011111111111100011223 >Biotin/Lipoyl Attachment; SWP:Q9R9I3; PDB:1Z6HA TVSIQMAGNLWKVHVKAGDQIEKGQEVAILESMKMEIPIVADRSG 000000000000000000000000000000000000000000000 IVKEVKKKEGDFVNEGDVLLELSNSTQ 000000000000000000000001135 >glutaredoxin; SWP:Q5PSJ1; PDB:1Z7PA MASKQELDAALKKAKELASSAPVVVFSKTYCGYCNRVKQLLTQVG 530000000000000000000000000000000000000000000 ASYKVVELDELSDGSQLQSALAHWTGRGTVPNVFIGGKQIGGCDT 000000000000000000000000001000000000000000000 VVEKHQRNELLPLLQDAAATAKNPAQL 000000000000000000001112212 >conserved hypothetical pr; SWP:O25554; PDB:1Z8MA MLKLNLKKSFQKDFDKLLLNGFDDSVLNEVILTLRKKEPLDPQFQ 210000000000000000010000000000000001111111100 DHALKGKWKPFRECHIKPDVLLVYLVKDDELILLRLGSHSELF 0000011000000000000000000001000000000000001 >Coxsackievirus B4 polypro; SWP:P08292; PDB:1Z8RA MAHHHHHHERASLITTGPYGHQSGAVYVGNYKVVNRHLATHVDWQ ----------------97654321000000000000000000000 NCVWEDYNRDLLVSTTTAHGCDTIARCQCTTGVYFCASKSKHYPV 000000000000000000010000000000000001221100000 SFEGPGLVEVQESEYYPKRYQSHVLLATGFSEPGDAGGILRCEHG 000000000000001000000000000001222221100000000 VIGLVTMGGEGVVGFADVRDLLWLEDDAMEQ 0000000000000000000000000000134 >DNA primase; SWP:Q9X4D0; PDB:1Z8SA MAKKLLPAFQNAERLLLAHMMRSRDVALVVQERIGGRFNIEEHRA 999986432222111111111122221211111112223222111 LAAYIYAFYEEGHEADPGALISRIPGELQPLASELSLLLIADDVS 111112223343332211111222332222111111222233323 EQELEDYIRHVLNRPKWLMLKVKEQEKTEAERRKDFLTAARIAKE 332222222222233322211111222334455567875543332 MIEMKKMLSSS 11211233345 >conserved hypothetical pr; SWP:NA; PDB:1Z9VA MGSSHHHHHHSSGLVPRGSHMTFCLETYLQQSGEYEIHMKRAGFR -------------------10000000011111110100000000 ECAAMIEKKARRVVHIKPGEKILGARIIGIPPVPIGIDEERSTVM 000000000000000000000001011111100000000000000 IPYTKPCYGTAVVELPVDPEEIERILEVAEP 0110000000000000000000000001112 >vhl-1; SWP:P84522; PDB:1ZA8A CGESCAMISFCFTEVIGCSCKNKVCYLNSIS 0000000000000000000000000000000 >Ubiquitin fusion degradat; SWP:P53044; PDB:1ZC1A MFSGFSSFGGGNGFVNMPQTFEEFFRCYPIAMMNDRIRKDDANFG 999999999999853210000000000000011111110000000 GKIFLPPSALSKLSMLNIRYPMLFKLTANETGRVTHGGVLEFIAE 000000000000000000010000000012110000000000000 EGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFL 000000000000000001000000000001000000000000100 DISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPES 001000000000000000000000000000000000000000000 SSKSICVIETDLVTDFAPPVGYVEPDYK 0000001111100000011234689999 >Plectasin; SWP:Q53I06; PDB:1ZFUA GFGCNGPWDEDDMQCHNHCKSIKGYKGGYCAKGGFVCKCY 3100111110000000000000110100000011000001 >Hypothetical UPF0213 prot; SWP:Q9KGL3; PDB:1ZG2A MAGDPMNHYVYILECKDGSWYTGYTTDVDRRIKKHASGKGAKYTR -----2111100011121110011122221122333455666665 GRGPFRLVATWAFPSKEEAMRWEYEVKHLSRRKKEQLVSLKGGPY 432111111111111111111000001111111111111222356 ENTTKLSTTLEHHHHHH 799999999-------- >Putative low molecular we; SWP:P39155; PDB:1ZGGA MDIIFVCTGNTCRSPMAEALFKSIAEREGLNVNVRSAGVFASPNG 000000000000000000000000000000000000000000000 KATPHAVEALFEKHIALNHVSSPLTEELMESADLVLAMTHQHKQI 000000000000000000000000000000000000000000000 IASQFGRYRDKVFTLKEYVTGSHGDVLDPFGGSIDIYKQTRDELE 000000000000000000000000000000000000000000000 ELLRQLAKQLKKDRR 000000000000111 >hypothetical protein HP12; SWP:O25839; PDB:1ZHCA MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQQNASDAE 210000000000000000000000000000000000011000000 VSHMKKQKLKLKDEIHSMIIEYREKQKSERA 0000000000000000000000000000111 >transcriptional regulator; SWP:O66551; PDB:1ZITA MKRVLVVDDEESITSSLSAILEEEGYHPDTAKTLREAEKKIKELF 100000000123211101100000000000000000000000000 FPVIVLDVWMPDGDGVNFIDFIKENSPDSVVIVITGHGSVDTAVK 000000000111110000000000000000000011221100000 AIKKGAYEFLEKPFSVERFLLTIKHAFEEYS 0000000000122210000000000000122 >Jingzhaotoxin-VII; SWP:NA; PDB:1ZJQA GCGGLMAGCDGKSTFCCSGYNCSPTWKWCVYARP 2110000011111110110000000000000013 >Foldase protein prsA; SWP:P24327; PDB:1ZK6A GSGKIRASHILVADKKTAEEVEKKLKKGEKFEDLAKEYSTDSSAS --1000000000000000000000000000000000000000000 KGGDLGWFAKEGQMDETFSKAAFKLKTGEVSDPVKTQYGYHIIKK 000000000011110000000000000000000000000000000 TEE 000 >Ornithine decarboxylase a; SWP:P54370; PDB:1ZO0A ILYSDERLNVTEEPTSNDKTRVLSIQCTLTEAKQVTWRAVWNGGG 100011100000011344200000000012221100000000110 LYIELPAGPLPEGSKDSFAALLEFAEEQLRADHVFICFPKNREDR 000001112222111110000000000001110000001122211 AALLRTFSFLGFEIVRPGHPLVPKRPDACFMVYTLE 111111122211000123356432221100000112 >Presynaptic protein SAP97; SWP:Q62696; PDB:1ZOKA EYEEITLERGNSGLGFSIAGGTDNPHIGDDSSIFITKIITGGAAA 000000000000000000000000000000000000000000000 QDGRLRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYVKRR 000000000000000000000000000000000000000000000 KAF 000 >Zinc finger protein 593; SWP:O00488; PDB:1ZR9A GHHHHHHLEKAKRRRPDLDEIHRELRPQGSARPQPDPNAEFDPDL -----------------------------------7654421211 PGGGLHRCLACARYFIDSTNLKTHFRSKDHKKRLKQLSVEPYSQE 000000000000000000000000000000000000124579999 EAERAAGMGSYVPPRRLAVPTEVSTEVPEMDTST 999999999999---------------------- >E1B-55kDa-associated prot; SWP:NA; PDB:1ZRJA GSSGSSGMDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALS 976543210000000000000000000000000000000000001 GPSSG 35799 >E-2/E-2' protein; SWP:Q9ZFE7; PDB:1ZRRA SALTIFSVKDPQNSLWHSTNAEEIQQQLNAKGVRFERWQADRDLG 000000000000000000000000000000000000000000001 AAPTAETVIAAYQHAIDKLVAEKGYQSWDVISLRADNPQKEALRE 111100000000000000000000000000010001011000000 KFLNEHTHGEDEVRFFVEGAGLFCLHIGDEVFQVLCEKNDLISVP 000000000000000000000100000000000000000000000 AHTPHWFDMGSEPNFTAIRIFDNPEGWIAQFTGDDIASAYPRLA 00000000000000000000000000000000000000000001 >stomoxyn; SWP:Q8T9R8; PDB:1ZRXA RGFRKHFNKLVKKVKHTISETAHVAKDTAVIAGSGAAVVAAT 764443222112211111222222233333222333345567 >Hypothetical protein yqbG; SWP:P45923; PDB:1ZTSA MLLITPDELKSYSVFESVKTRPDELLKQDILEATADIILKVGHDF 989886774577675443456899867854664466557877679 SDAEYIPLPETVRLALLKLSQFYALINGDESIIKGYTTEKIGDYS 999999999997775345424665799999999999999999999 YTLGDGSSLQKPDVYALIKDYVKPADPDLEGIEAKVRMRSILEHH 999999999999999999999999988676668999999999999 HHHH 9999 >RNA binding protein ZFa; SWP:Q8AVN9; PDB:1ZU1A ADEFGNGDALDLPVGKDAVNSLIRENSHIFSDTQCKVCSAVLISE 999999999999999999999999999999999999899999999 SQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGE 999998788987899899999999999999999999999999999 DRSKCCPVCNMTFSSPVVAESHYIGKTHIKNLRLREQ 9999999999999999999999999999999999999 >Mitochondrial import rece; SWP:NA; PDB:1ZU2A GPLGSMDTETEFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGV 999876542100000000000000000000000000000000000 LLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAY 000000000000000000000000000000000000000000000 TSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTA 000000000000000000000000000000000000000000000 KAPQLHAEAYKQGLGGSHHHHHH 00000000000013689999999 >PHAGE 434 CRO PROTEIN; SWP:P03036; PDB:1ZUG_ MQTLSERLKKRRIALKMTQTELATKAGVKQQSIQLIEAGVTKRPR 110000000000000000000000000000000000000000000 FLFEIAMALNCDPVWLQYGTKRGKAA 00000000000000000001246789 >Zinc-responsive transcrip; SWP:P47043; PDB:1ZW8A DLKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWED 100000000000000000000000000011222221100000000 CDFLGDDTASIVNHINAQH 0000000000000000000 >Gamma crystallin S; SWP:O35486; PDB:1ZWMA SKTGGKISFYEDRNFQGRRYDCDCDCADFRSYLSRCNSIRVEGGT 431000000000000000000000000000000000000000000 WAVYERPNFSGHMYILPQGEYPEYQRWMGLNDRLGSCRAVHLSSG 000000000000000000000000000000000000000000000 GQAKIQVFEKGDFNGQMYETTEDCPSIMEQFHLREIHSCKVVEGT 000000000000000000000000000000000000000000000 WIFYELPNYRGRQYLLDKKEYRKPVDWGAASPAIQSFRRIVE 000000000000000000000000000000000000000000 >Major structural subunit; SWP:P33553; PDB:1ZWTA MEQSASDSNKSQNAISEVMSATSAINGLYIGQTSYSGLDSTILLN 642110000000000000000000000011111001100000000 TSAIPDNYKDTTNKKITNPFGGELNVGPANNNTAFGYYLTLTRLD 010000000000000000110000000000011100000000000 KAACVSLATLNLGTSAKGYGVNISGENNITSFGNSADQAAKSTAI 000000000001100000000000000000000000100000011 TPAEAATACKNTDSTNKVTYFMK 10000001011111000000001 >cGMP-dependent protein ki; SWP:Q13976; PDB:1ZXAA GSPGIPGSTSELEEDFAKILMLKEERIKELEKRLSEKEEEIQELK ----------------00000000000000000000000000000 RKLHKCQSVLPVPSTHIGPRTT 0000001--------------- >CalC; SWP:Q8KNF0; PDB:1ZXFA NYDPFVRHSVTVKADRKTAFKTFLEGFPEWWPNNFRTTKVGAPLG 101100000000000000000000000000000000001110100 VDKKGGRWYEIDEQGEEHTFGLIRKVDEPDTLVIGWRLNGFGRID 000000000000111110110000000000000000001121100 PDNSSEFTVTFVADGQKKTRVDVEHTHFDRMGTKHAKRVRNGMDK 111000000000001100000000010000111000000000001 GWPTILQSFQDKIDEEGAKK 00000000000000000112 >Immunoglobulin G binding; SWP:Q53759; PDB:1ZXGA MYYLVVNKQQNAFYEVLNMPNLNEDQRNAFIQSLKDDPSQSANVL 532101000000000000000000000000000000000000000 AEAQKLNDVQAPKA 00000000000135 >Immunoglobulin G binding; SWP:P19909; PDB:1ZXHA MYYLVVNKGQNAFYETLTKAVDAETARNAFIQSLKDDGVQGVWTY 100000000000000000000000000000000000000000000 DDATKTFTVQA 00000000000 >Methylosome subunit pICln; SWP:P35521; PDB:1ZYIA MHHHHHHLEMSFLKSFPPPGSAEGLRQQQPETEAVLNGKGLGTGT --------------------------1000000000000010000 LYIAESRLSWLDGSGLGFSLEYPTISLHAVSRDLNAYPREHLYVM 000011000000000000001221100001245565321000000 VNAKFGEESKESVAEEEDSDDDVEPIAEFRFVPSDKSALEAMFTA 001123457999999999998643000000000000000000000 MCECQALHPDPEDEDSDDYDGEEYDVEAHEQGQEND 0000000----------------------------- >Proto-oncogene tyrosine-p; SWP:P00519; PDB:1ZZPA GAMASTRVSLRKTRQPPERIASGAITKGVVLDSTEALCLAISRNS ---------------------211000000000000000000001 EQMASHSAVLEAGKNLYSFCVSYVDSIQQMRNKFAFREAINKLEN 111100000000000000000000000010000000000000000 NLRELQICPATAGSGPAATQDFSKLLSSVKEISDIVQRLE 0000000122344333221100000000000000000012 >Ferric-pseudobactin 358 r; SWP:P25184; PDB:2A02A SQEWTLDIPAQSMNSALQALAKQTDTQLLYSPEDIGGLRSSALKG 210000000000000000000000000000001101100000000 RHDLQSSLRILLQGTGLRYQIDGNTVTVTASAAAKDG 0000000000001100000000000000001346899 >Der f 13; SWP:Q1M2P5; PDB:2A0AA MASIEGKYKLEKSEKFDEFLDKLGVGFMVKTAAKTLKPTFEVAIE 321000000000000000000000000000000000000000000 NDQYIFRSLSTFKNTEAKFKLGEEFEEDRADGKRVKTVIQKEGDN 110000000000000000010000000011000000000000100 KFVQTQFGDKEVKIIREFNGDEVVVTASCDGVTSVRTYKRI 00000000000000000000000000000000000000000 >Regulating synaptic membr; SWP:Q9JIS1; PDB:2A20A GSQEQKGDAPTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSL --9753210000000000001110000000000000000000001 RSNKVMWVCNLCRKQQE 12100000000000001 >Protein E(sev)2B; SWP:Q08012; PDB:2A36A MEAIAKHDFSATADDELSFRKTQILKILNMEDDSNWYRAELDGKE 100000000000000000000000000000000000000000000 GLIPSNYIEMKNHD 00000000001235 >PROTEIN (DE NOVO THREE-HE; SWP:NA; PDB:2A3DA MGSWAEFKQRLAAIKTRLQALGGSEAELAAFEKEIAAFESELQAY 000000000000000000000000000000000000000000000 KGKGNPEVEALRKEAAAIRDELQAYRHN 0000000000000000000000000000 >U1 small nuclear ribonucl; SWP:P09012; PDB:2A3JA MKETAAAKFERQHMDSPDLGSTPPHTEPSQVVLITNINPEVPKEK ---------------------764321100000000000000000 LQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVE 000000000000000000000000010000000000000000000 AFQGYPFQGNPLVITFSETPQSQVAEDGSLEHHHHHH 000000000000000001111221234---------- >Myocyte Nuclear Factor; SWP:P42128; PDB:2A3SA ESKPPYSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADK 322211000000000000011000000000000000010111111 GWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQ 100000000000000000123467776421000000000000000 AFRKRRQRGVS 00112469999 >C4b-binding protein; SWP:P04003; PDB:2A55A MNCGPPPTLSFAAPMDITLTETRFKTGTTLKYTCLPGYVRSHSTQ 111111111110111222232211111111100001110112211 TLTCNSDGEWVYNTFCIYKRCRHPGELRNGQVEIKTDLSFGSQIE 000000110001111010011122222222222222211111222 FSCSEGFFLIGSTTSRCEVQDRGVGWSHPLPQCEILEHHHHHH 2222332222222211111122212222222222334567899 >Huntingtin interacting pr; SWP:Q9BYW2; PDB:2A7OA GSHMTAEADTSSELAKKSKEVFRKEMSQFIVQCLNPYRKPDCKVG ---------000000000000000000000000000000000000 RITTTEDFKHLARKLTHGVMNKELKYCKNPEDLECNENVKHKTKE 000000000000000000000000000000000000000000000 YIKKYMQKFGAVYKPKEDTELE 0000000000000000000--- >Hypothetical protein Rv23; SWP:P64983; PDB:2A7YA GSHMHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWL ---110000000001344432100000000011111000000000 VNGHETTVYPGSDAVVVTATEHAEAEKRAAARAGHAAT 00000000001110000000000000000000001224 >ZNF29; SWP:NA; PDB:2AB3A MVYVCHFENCGRSFNDRRKLNRHKKIHTG 00000000000000000000000000000 >hypothetical protein TA07; SWP:Q9HK62; PDB:2ABYA MGTSHHHHHHSSGRENLYFQSHMQKGLEIAFQTINGLDESLVQAL ----------------------43110000000112100000000 AGVTASDFPDLDIKYNIFLVDLYGQKYFRILFQSKKLSELHPEER 000000012111000000000000000000000001101100000 KKVREKFDENSRMQYSELMTKYHDLKKQGKIKDRPVKEVHEEYDL 000000000000000000000000000111000000000001110 WEDPIWQYIGS 000000011-- >Alpha-1-syntrophin; SWP:Q61234; PDB:2ADZA ASGRRAPRTGLLELRCGAGSGAGGERWQRVLLSLAEDALTVSPAD 975310000000000123566532110000000000000000001 GEPGPEPEPAQLNGAAEPGAAPPQLPEALLLQREVSPYFKNSAGG 246799999999999999999998644656899999999999999 TSVGWDSPPASPLQRQPSSPGPQPRNLSEAKHVSLKMAYVSRRCT 999999999999999999997654321110000010000000001 PTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIGT 1212110000000000000000000000000000000000002 >protein Asl1650; SWP:NA; PDB:2AFDA GSHMKTIQPASVEDIQSWLIDQFAQQLDVDPDDIDMEESFDNYDL 532110000000000000000000000000000000000000000 NSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKRLGELYL 0000000000000000000000000000000000000000000 >gene rich cluster, C9 gen; SWP:O88838; PDB:2AFJA GSSARQSTPTSQALYSDFSPPEGLEELLSAPPPDLVAQRHHGWNP 999999999999999998643322122122221111111111112 KDCSENIDVKEGGLCFERRPVAQSTDGVRGKRGYSRGLHAWEISW 221111110112211111122323221111112111110000011 PLEQRGTHAVVGVATALAPLQADHYAALLGSNSESWGWDIGRGKL 223455542101001122346678999876321110101123345 YHQSKGLEAPQYPAGPQGEQLVVPERLLVVLDMEEGTLGYSIGGT 678888878999986654354212100000000110000001221 YLGPAFRGLKGRTLYPSVSAVWGQCQVRIRYMGERRVEETRRIHR 111110000000000000111122211000111223468899999 D 9 >PROTEIN (SEA RAVEN TYPE I; SWP:P05140; PDB:2AFPA QRAGPNCPAGWQPLGDRCIYYETTAMTWALAETNCMKLGGHLASI 998542122211111100000000000000000000001000011 HSQEEHSFIQTLNAGVVWIGGSACLQAGAWTWSDGTPMNFRSWCS 110000000001110000111111223332211122322222223 TKPDDVLAACCMQMTAAADQCWDDLPCPASHKSVCAMTF 222221111000011233221111010000000000001 >Machado-Joseph disease pr; SWP:P54252; PDB:2AGAA GPLGSMESIFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQL 111000000000112210000000000001100000000000000 DEEERMRMAEGGVTSEDYRTFLQQPSGNMDDSGFFSIQVISNALK 000000000001000000000000001000110000000000000 VWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQW 000000000000000000000001000000001000000000000 FNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLPDCEAD 000000000000000000000000000000000000000000000 QLLQMIRVQQ 0001123567 >RNA polymerase sigma fact; SWP:O66858; PDB:2AHQA TYSLRTFFVRESAEGLTQGELMKLIKEIVENEDKRKPYSDQEIAN 999999999975321100000000000000001110000000000 ILKEKGFKVARRTVAKYREMLGIPSSRERRI 0000111000000000000001--------- >Bowman-Birk type protease; SWP:Q8W4Y8; PDB:2AIHA GDDVKSACCDTCLCTRSQPPTCRCVDVRESCHSACDKCVCAYSNP 764321111100000111110000000011111111000000011 PQCQCYDTHKFCYKACHNSEIE 1000000111111111245578 >fragment of Nucleoporin N; SWP:Q02630; PDB:2AIVA GPNENYYISPSLDTLSSYSLLQLRKVPHLVVGHKSYGKIEFLEPV 864211101100100111111111111000011111000001111 DLAGIPLTSLGGVIITFEPKTCIIYANLPNRPKRGEGINVRARIT 111221133333321111111112223344444432211111000 CFNCYPVDKSTRKPIKDPNHQLVKRHIERLKKNPNSKFESYDADS 012223345665433444322111110111111211101001111 GTYVFIVNHAAEQT 10000112234679 >Probable cadmium-transpor; SWP:Q60048; PDB:2AJ0A MAEKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITV 421000000000000000000000000000000000011100000 TGEASIQQVEQAGAFEHLKIIPEKEA 00000000000000000000001135 >telomere repeat-binding p; SWP:Q9LTI6; PDB:2AJEA GSHMLEDPQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFE --------8864321000000000000000000000000000000 DADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQELLNRVLNAH 000000000000000000000001122233211000000000000 GYWTQQQMQQLQQNV 000000111244454 >phnA-like protein; SWP:Q6N1A7; PDB:2AKKA MSIEVRDCNGALLADGDNVSLIKDLKLKGSSTVLKRGTMIRGIRL 210000000000000000000000000122000000000000000 TDSEDEIEGRTDKIKGLVLRTEFLKKAGS 00000000000000000000000000024 >phnA-like protein pa0128; SWP:NA; PDB:2AKLA MGSSHHHHHHSSGRENLYFQGHMVSTLPPCPQCNSEYTYEDGALL ----------------------99999999999999987999864 VCPECAHEWSPNEAATASDDGKVIKDSVGNVLQDGDTITVIKDLK 568998654578889999999876666777666654433355655 VKGSSLVVKVGTKVKNIRLVDGDHDIDCKIDGIGAMKLKSEFVRK 556665555543333444567776533233564322234565444 VGS 566 >TUG long isoform; SWP:Q8VBT9; PDB:2AL3A MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDF ---------000000000000000000000000000000000000 NPSEYDLKFQRTVLDLSLQWRFANLPNNAKLEMVPVSRSREGPEN 0000000000000000000000000000000000000013----- >Protein disulfide-isomera; SWP:Q5RDG4; PDB:2ALBA SDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEA 100000000000001111111000000000112111100000000 AATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGA 000000000000000000000000000001000000000000010 YDGPRTADGIVSHLKKQAGPASV 01110000000000000013467 >Caltractin; SWP:P05434; PDB:2AMIA GSMSYKAKTVVSARRDQKKGRVGLTEEQKQEIREAFDLFDTDGSG --------------------4310000000000000000000100 TIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLT 000000000000000000000000000000001200000000000 MMTAKM 000001 >Hypothetical protein NE21; SWP:Q82SY3; PDB:2AMWA MQHLEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNV 000000000000000000000000000000000000000000000 ITALEEYFDFSVDDDEISAQTFETLGSLALFVEHKLSH 00000000000000000000000000000000000013 >Protein HI1723; SWP:P45344; PDB:2APNA MIDDMAVPLTFTDAAANKVKSLISEEENTDLKLRVYITGGGCSGF 644410000000000000000000000000000000000121100 QYGFTFDEKVNDGDLTIEKSGVQLVIDPMSLQYLIGGTVDYTEGL 000000000001000000000000000000000000000000011 EGSRFTVNNPNATSTCGCGSSFSI 110000000101235899999999 >H/ACA ribonucleoprotein c; SWP:Q6Q547; PDB:2AQAA HLMYTLGPDGKRIYTLKKVTESGEITKSAHPARFSPDDKYSRQRV 998667999987677899999999999999999999877766667 TLKKRFGLVPGQHHHHHH 799999999999------ >WILSON DISEASE ATPASE; SWP:P35670; PDB:2ARFA AGHMVPRVMRVLLLGDVATLPLRKVLAVVGTAEASSEHPLGVAVT 432211000000001012110000000000000011111110000 KYCKEELGTETLGYCTDFQAVPGCGIGCKVSNVEGILAHSERPLS 001001111111100000000000000000000111123455678 APASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVS 999999999997665432110000000000000010101111100 DAMTDHEMKGQTAILVAIDGVLCGMIAIAD 000000000000000000000000000001 >potential NAD-reducing hy; SWP:Q46505; PDB:2AUVA MVPKGKYPISVCMGTACFVKGADKVVHAFKEQLKIDIGDVTPDGR 997531000000001100010000000000000001100011110 FSIDTLRCVGGCALAPIVMVGEKVYGNVTPGQVKKILAEY 1010110111111111100001000111111000000000 >Acyl carrier protein I, c; SWP:P07854; PDB:2AVAA AKKETIDKVSDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIV 000000000000000000000000000000012343332000000 MNLEEEFGINVDEDKAQDISTIQQAADVIEGLLEKKA 0000000000000000000000000000000000136 >Myosin-binding protein C,; SWP:Q14896; PDB:2AVGA MHHHHHHSSMDDPIGLFVMRPQDGEVTVGGSITFSARVAGASLLK ----------00000000000000000000000000000001000 PPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQ 000000000000000000000000000000000000000000000 PAFTGGYRCEVSTKDKFDCSNFNLTVHEAM 000000000000000000000000000014 >Regulatory protein sdiA; SWP:P07026; PDB:2AVXA MSDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLC 532110000000000000000000000000000000000000000 VRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQ 000111111000000000000000000000000000000000000 GHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPERALGFLSF 000000000000000000000000000000000001110000000 SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDE 000000000000000000000000000000000012 >Hypothetical 11.0 kDa pro; SWP:P40554; PDB:2AX5A MVNVKVEFLGGLDAIFGKQRVHKIKMDKEDPVTVGDLIDHIVSTM 100000000000000000000000000100000000000000000 INNPNDVSIFIEDDSIRPGIITLINDTDWELEGEKDYILEDGDII 000000000000110000000000000000001000000000000 SFTSTLHGGLEHHHHHH 000012479-------- >discrepin; SWP:P84777; PDB:2AXKA IDTNVKCSGSSKCVKICIDRYNTRGAKCINGRCTCYP 0000000100000000000000000000000000000 >Werner syndrome; SWP:Q14191; PDB:2AXLA MDDSEDTSWDFGPQAFKLLSAVDILGEKFGIGLPILFLRGSNSQR 554321000000000110000000000000000000000000000 LADQYRRHSLFGTGKDQTESWWKAFSRQLITEGFLVEVSRYNKFM 000011100000000000000000000000000000000000100 KICALTKKGRNWLHKANTESQSLILQANEELCPKKLLLPSSKTVS 000000000000000001000000000000112233455678999 SGTKEHCYN 999999999 >DNA polymerase III subuni; SWP:P06710; PDB:2AYAA MKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALN 999866532211110000100110000000000000000000000 AWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELT 000001110000000010000000000000000000001110000 IVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQ 00111121100000111111000000111233455799 >50S ribosomal protein L40; SWP:Q980V5; PDB:2AYJA MPLTDPAKLQIVQQRVFLKKVCRKCGALNPIRATKCRRCHSTNLR 999986431001221110000000000000000000000010000 LKKKELPTKKG 00013467899 >Sensor kinase protein rcs; SWP:P14376; PDB:2AYXA MGGSGVEGLSGKRCWLAVRNASLCQFLETSLQRSGIVVTTYEGQE 999999999999999999999999999999999999999999999 PTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSV 999999999999999999999999999999999999999999999 AAPHELPALLARIYLIEMESDDPANALPSTDKAVSDNDDMMILVV 999999999999999999999999999999999999999999999 DDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSD 999999999999999999999999999999999999999888999 VNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMD 999999999999999999999888899999999999999999988 SCLSKPVTLDVIKQTLTLYAERVRKSRDS 99999999999999888888999999999 >Picornain 3C (Protease 3C; SWP:P03303; PDB:2B0FA GPNTEFALSLLRKNIMTITTSKGEFTGLGIHDRVCVIPTHAQPGD -----9--------------------------------------- DVLVNGQKIRVKDKYKLVDPENINLELTVLTLDRNEKFRDIRGFI --------------------------------------------- SEDLEGVDATLVVHSNNFTNTILEVGPVTMAGLINLSSTPTNRMI --------------------------------------------- RYDYATKTGQCGGVLCATGKIFGIHVGGNGRQGFSAQLKKQYFVE --------------------------------------------- KQ -- >Talin-1; SWP:P26039; PDB:2B0HA GIDPFTMGDPEGSFVDYQTTMVRTAKAIAVTVQEMVTKSNTSPEE 999999864321000000000000000000000000000000000 LGPLANQLTSDYGRLASQAKPAAVAAENEEIGAHIKHRVQELGHG 000000000000000000000000000000000000000000000 CSALVTKAGALQCSPSDVYTKKELIECARRVSEKVSHVLAALQAG 000000000000000000000000000000000000000000001 NR 23 >Calmodulin-like protein 5; SWP:Q9NZT1; PDB:2B1UA ARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELD 311100000000000122211000000000000011001000000 AMIREADVDQDGRVNYEEFARMLAQE 00000000111100000000000112 >kalata B8; SWP:NA; PDB:2B38A CGETCLLGTCYTTGCTCNKYRVCTKDGSVLN 1100000000000000000000000222221 >Hypothetical protein ybiA; SWP:P30176; PDB:2B3WA MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWP 421112211111110000011112110000000000000000000 TSEHYFQAQKFLDEKYREEIRRVSSPMVAARMGRDRSKPLRKNWE 000000000000010000000000000000000111111101000 SVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWGD 000000000000000000000000000000000001111111001 GGHGKGKNRLGYLLMELREQLAIEKLEHHHHHH 112111000000000000000000111234679 >Gastric inhibitory polype; SWP:P09681; PDB:2B4NA YAEGTFISDYSIAMDKIHQQDFVNWLLAQKGKKNDWKHNITQ 999999753110000000000000000011346899999999 >YkuV protein; SWP:NA; PDB:2B5XA MKLRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCK 100000000000000000000000000000000000000000000 EAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDI 000000000000000000000000000000000000000000000 TQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKM 000000000000000000000000000000000000000010000 LEKRVNRVLAETE 0000000000000 >defensin; SWP:NA; PDB:2B68A GFGCPGNQLKCNNHCKSISCRAGYCDAATLWLRCTCTDCNGKK 1000000000000000000000000000000000000000124 >Pre-mRNA processing prote; SWP:NA; PDB:2B7EA GAMEAEKEFITMLKENQVDSTWSFSRIISELGTRDPRYWMVDDDP 110000000000000000000000000000000000000000000 LWKKEMFEKYLSNR 00000000000000 >Double-stranded RNA-speci; SWP:NA; PDB:2B7TA PGPVLPKNALMQLNEIKPGLQYMLLSQTGPVHAPLFVMSVEVNGQ 987530000000000000000000000012211000000000000 VFEGSGPTKKKAKLHAAEKALRSFVQFP 0000000000000000000000000134 >Double-stranded RNA-speci; SWP:NA; PDB:2B7VA PSGKNPVMILNELRPGLKYDFLSESGESHAKSFVMSVVVDGQFFE 753200000000001000000000123432100000000000000 GSGRNKKLAKARAAQSALATVFNLHL 00000000000000000000000012 >Cytoplasmic protein NCK2; SWP:NA; PDB:2B86A MTEEVIVIAKWDYTAQQDQELDIKKNERLWLLDDSKTWWRVRNAA 321000000000000000000000000000000000000000000 NRTGYVPSNYVERKLEHHHHHH 00000000000001-------- >ZTaq affibody; SWP:NA; PDB:2B87A VDNKFNKELGWATWEIFNLPNLNGVQVKAFIDSLRDDPSQSANLL 64310000---0--00--00000--00-000-0000000000000 AEAKKLNDAQAPK 0000000000001 >anti-ZTaq affibody; SWP:NA; PDB:2B87B VDNKFNKERVIAIGEIMRLPNLNSLQVVAFINSLRDDPSQSANLL 653100000000000000000000000000000000000000000 AEAKKLNDAQAPK 0000000000001 >Dynein light chain 2A; SWP:NA; PDB:2B95A MGHHHHHHSHMAEVEETLKRLQSQKGVQGIIVVNTEGIPIKSTMD ----------00000000000000000000000000000000000 NPTTTQYASLMHSFILKARSTVRDIDPQNDLTFLRIRSKKNEIMV 000000000000000000000000000000000000000000000 APDKDYFLIVIQNPTE 0000000000000001 >Antimicrobial peptide LCI; SWP:NA; PDB:2B9KA AIKLVQSPNGNFAASFVLDGTKWIFKSKYYDSSKGYWVGIYEVWD 000000000000000000000000000000000000000000000 RK 01 >Thrombospondin-related an; SWP:NA; PDB:2BBXA GSASCGVWDEWSPCSVTCGKGTRSRKREILHEGCTSEIQEQCEEE 632100000000000011100000000000011000000000111 RCPP 1234 >ENDO-B1,4-MANNANASE 5C; SWP:NA; PDB:2BGOA MAVPEGNSWTYTAASASITAPAQLVGNVGELQGAGSAVIWNVDVP -------10000000000000000010000000000000000000 VTGEYRINLTWSSPYSSKVNTLVMDGTALSYAFAEATVPVTYVQT 000000000000000000000000000000000000000000000 KTLSAGNHSFGVRVGSSDWGYMNVHSLKLELLGGLTIRSPANLEH 000000000000000001000000000000013------------ HHHHH ----- >PROTEIN (BID); SWP:NA; PDB:2BIDA GSMDCEVNNGSSLRDECITNLLVFGFLQSCSDNSFRRELDALGHE 999999999985420000000000000000001000000000000 LPVLAPQWEGYDELQTDGNRSSHSRLGRIEADSESQEDIIRNIAR 113556678999999999999999999864322100000000000 HLAQVGDSMDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQ 000000000001122100000000000101000000000000000 LLQAYPRDMEKEKTMLVLALLLAKKVASHTPSLLRDVFHTTVNFI 000001111000000000000000000000000000000000000 NQNLRTYVRSLARNGMD 00000000000000002 >FRAGILE X MENTAL RETARDAT; SWP:NA; PDB:2BKDN MEELVVEVRGSNGAFYKAFVKDVEDSITVAFENNWQPDRQIPFDV -----1--------------------------2----------11 RFPPPVGYNKDINESDEVEVYSRANEKEPCCWWLAKVRMIKGEFY 123457654322222111112222345777542211111223221 VIEYAACDATYNEIVTIERLRSVNPNKPATKDTFKIKLDVP 1111234443221112222112222211223323------- >PENTON PROTEIN; SWP:P03276; PDB:2BLDA TGGRNSIRYSELAPLFDTTRVYLVDNKSTDVASLNYQNDHSNFLT ---000000000000000000000000000000000000000000 TVIQNNDYSPGEASTQTINLDDRSHWGGDLKTILHTNMPNVNEFM 000000000000000000000000000000000000000000000 FTNKFKARVMVSRSLTKDKQVELKYEWVEFTLPEGNYSETMTIDL 000000000000000000000000000000000000000000000 MNNAIVEHYLKVGRQNGVLESDIGVKFDTRNFRLGFDPVTGLVMP 000000000000000000000000000000000000000000000 GVYTNEAFHPDIILLPGCGVDFTHSRLSNLLGIRKRQPFQEGFRI 000000000000000000000000000000000000000000000 TYDDLEGGNIPALLDVDAYQASLKDDTEQGGDGAGGGNNSGSGAE 00000000000000000000000---------------------- ENSNAAAAAMQPVEDMNDHAIRGDTFATRAEEKRAEAEAAAEAAA --------------------------------------------- PAAQPEVEKPQKKPVIKPLTEDSKKRSYNLISNDSTFTQYRSWYL -----------0000000000000000000000000000000000 AYNYGDPQTGIRSWTLLCTPDVTCGSEQVYWSLPDMMQDPVTFRS 000000000000000000000000000000000000000000000 TSQISNFPVVGAELLPVHSKSFYNDQAVYSQLIRQFTSLTHVFNR 000000000000000000000000000000000000000000000 FPENQILARPPAPTITTVSENVPALTDHGTLPLRNSIGGVQRVTI 000000000000000000000000000000000000000000000 TDARRRTCPYVYKALGIVSPRVLSSRTF 00000000000000000000000000-- >TOXIN BMTX2; SWP:NA; PDB:2BMT_ FTNVSCSASSQCWPVCKKLFGTYRGKCMNSKCRCYS 000000000000000000000000000000000001 >ATP SYNTHASE OLIGOMYCIN S; SWP:NA; PDB:2BO5A FAKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVGQI 999997654321100000000000000000000000000000000 LKEPKMAASLLNPYVKRSVKVKSLSDMTAKEKFSPLTSNLINLLA 000010010000111011000000000000000000000000000 ENGRLTNTPAVISAFSTMMSVHRGEVPCTV 011000000000000000000001123467 >MALES-ABSENT ON THE FIRST; SWP:NA; PDB:2BUDA GSHMDPLMQKIDISENPDKIYFIRREDGTVHRGQVLQSRTTENAA 986444432111010000000000000000000000000111111 APDEYYVHYVGLNRRLDGWVGRHRISDNADDLGGITVLPAPPLAP 110000000000000000000000000000000111235789999 DQ 99 >MICRONEMAL PROTEIN 1; SWP:NA; PDB:2BVBA KTEIHGDSTKATLEEGQQLTLTFISTKLDVAVGSCHSLVANFLDG 000000000000000000000000000000000000000000000 FLKFQTGSNSAFDVVEVEEPAGPAVLTIGLGHKGRLAVVLDYTRL 000000000000000000000000000000000000000000000 NAALGSAAYVVEDSGCSSSEEVSFQGVGSGATLVVTTLGESPTAV 000000000000000000000000000000000000000000000 SA 00 >BYPASS OF FORESPORE C; SWP:NA; PDB:2BW2A AEVEHYEPLQVHVQLEKVYLDGDVSIEHKHEKVFSMDDFWAAYAG 754321100000000111111111110000000000100000000 WTLVEQKKGYVLFRKQMDDISPLSKVNGYIGVSDNGVISTFHGRP 001111110000001111111111111100001111000001111 EPASEPIQSFFQIDLERLESHMQKNLLKGIPFRTKAEFEDVIEHM 111111111111111111211111000100111000000000111 KTYSG 11112 >PHOSPHOLIPASE C, EPSILON; SWP:NA; PDB:2BYEA GEERKCLQTHRVTVHGVPGPEPFTVFTINGGTKAKQLLQQILTNE 987643210000000001110000000000100000000000012 QDIKPVTTDYFLMEEKYFISKEKNECRKQPFQRAIGPEEEIMQIL 221111000000000123344465655422100000000000000 SSWFPEEGYMGRIVLKTQQE 01123454211000000011 >CONSERVED DOMAIN PROTEIN; SWP:NA; PDB:2BZBA MEMGQLKNKIENKKKELIQLVARHGLDHDKVLLFSRDLDKLINKF 210000000000000000000000000000000000000000000 MNVKDKVHKLEHHHHHH 00134678999999999 >INHIBITOR OF CYSTEINE PEP; SWP:NA; PDB:2C34A GSHMIAPLSVKDNDKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFV 999997654321000000000000000000001101000000000 GKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKPRKRGHHT 001100000000000000124678876420000000000000000 LELVYTRPFEGIKPENERYTLHLNVK 00000000000000000000000000 >SET DOMAIN PROTEIN 2; SWP:NA; PDB:2C5ZA GAMGKTVSQSQRLEHNWNKFFASFVPNLIKKNPQSKQFDHENIKQ ------100000000000000000000000000000000000000 CAKDIVKILTTKELKKDSSRAPPDDLTKGKRHKVKEFINSYMDKI 000000000000000000000000000000000000000000000 ILKKKQKKALGLSS 001111122----- >RETINOBLASTOMA-BINDING PR; SWP:NA; PDB:2C7HA GPLGSMSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLK 764320000000000000000000000000000000000000000 AADCDLQITNAQTKEEYTDDNALIPKNSSVIVRRIPIGGVK 00000000000000000000000000000000000001357 >BASIC FIBROBLAST GROWTH F; SWP:P16092; PDB:2CKNA PTLPEQAQPWGVPVEVESLLVHPGDLLQLRCRLRDDVQSINWLRD 221312453222210000000000000000000011100000000 GVQLVESNRTRITGEEVEVRDSIPADSGLYACVTSSPSGSDTTYF 000011220000000000000000000000000000111000000 SVNVS 00000 >NEDD9 interacting protein; SWP:Q8TDZ2; PDB:2CO8A GSSGSSGQHQEAGAGDLCALCGEHLYVLERLCVNGHFFHRSCFRC 999999865443221100000111111110000000000000000 HTCEATLWPGGYEQHPGDGHFYCLQHLPQTDSGPSSG 0000000000000000000000000000002357899 >thymus high mobility grou; SWP:Q66JW3; PDB:2CO9A GSSGSSGKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATF 999999997654432100100000000000000000000000010 GEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLV 000000000000000000000000000000000000000000111 SKSYTDSGPSSG 246899999999 >Protein kinase C, D2 type; SWP:Q9BZL6; PDB:2COAA GSSGSSGTLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNTTN 976542000000000000000000000000000000000000001 RYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVTANATYFVGE 000000000000000000000000110000000000000000000 MPGGTPGGPSGQGAEAARGWETAIRQALMSGPSSG 01134555654210000000000000000013568 >LCoR protein; SWP:Q96JN0; PDB:2COBA GSSGSSGRGRYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHS 999999997542000000000000000000000000000000000 TLEYKVKERLGTLKNPPKKKMKLMR 0000000000001245899999999 >FYVE, RhoGEF and PH domai; SWP:Q5JSP0; PDB:2COCA GSSGSSGSLLCGPLRLSESGETWSEVWAAIPMSDPQVLHLQGGSQ 976432100000000000000000000000000000000001122 DGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAKQSWYLSASS 210000000000000000011110000000000000000000000 AELQQQWLETLSTAAHSGPSSG 0000000000000001235689 >Centaurin-delta 1; SWP:Q8WZ64; PDB:2CODA GSSGSSGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKE 754321100000000001234331000000000000000001233 MYSKGIIPLSAISTVRVQGDNKFEVVTTQRTFVFRVEKEEERNDW 332100000000000000010000000010000000000000000 ISILLNALKSQSLTSQSQASGPSSG 0000000000012468999999999 >deoxynucleotidyltransfera; SWP:P04053; PDB:2COEA GSSGSSGTGALMASSPQDIKFQDLVVFILEKKMGTTRRALLMELA 999999999999876432101100000000000000000000000 RRKGFRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPEL 000000000000000000000000000000000000000000000 LDVSWLIECIGAGKPVEMTGKHQLSGPSSG 000000000000000000100000124457 >Protein KIAA1914; SWP:Q8N4X5; PDB:2COFA GSSGSSGLETSSYLNVLVNSQWKSRWCSVRDNHLHFYQDRNRSKV 876543211000000000000000000000000000001111100 AQQPLSLVGCEVVPDPSPDHLYSFRILHKGEELAKLEAKSSEEMG 000000000000000000000000000000000000000000000 HWLGLLLSESGSGPSSG 00000000001345679 >Poly [ADP-ribose] polymer; SWP:P09874; PDB:2COKA GSSGSSGDKPLSNMKILTLGKLSRNKDEVKAMIEKLGGKLTGTAN 765442210000000000000000000000000000000000000 KASLCISTKKEVEKMNKKMEEVKEANIRVVSEDFLQDVSASTKSL 000000000000000000000000000000000000000000000 QELFLAHILSSWGAEVKSGPSSG 00000000000001357999999 >nin one binding protein; SWP:Q8BW10; PDB:2CONA GSSGSSGVREARSYILRCHGCFKTTSDMNRVFCGHCGNKTLKKVS 888887543210000000000000000000000000000000000 VTINDDGTLHMHFSRNPKVLNPRGLRYSSGPSSG 0001111110011234556789999999999999 >Lipoamide acyltransferase; SWP:P11182; PDB:2COOA GSSGSSGHQEIKGRKTLATPAVRRLAMENNIKLSEVVGSGKDGRI 999999998765321000000000000000000000000010000 LKEDILNYLEKQTGAILPPSGPSSG 0000000000000235679999999 >Acyl-Coenzyme A binding d; SWP:Q9BR61; PDB:2COPA GSSGSSGLAELFEKAAAHLQGLIQVASREQLLYLYARYKQVKVGN 976431000000000000000000000000000000000000000 CNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQEYIAVVKKLDPG 000000000000000000000000000000000000000000000 WNPQIPEKKGKEASGPSSG 0001234568999999999 >PINCH protein; SWP:P48059; PDB:2CORA GSSGSSGEKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCA 999999999753210000000000000000000000000000000 NCGKELTADARELKGELYCLPCHDKMGVSGPSSG 0000000000000000000000000001246789 >Serine/threonine protein; SWP:Q7TSJ6; PDB:2COSA GSSGSSGVNRQMLQELVNAGCDQEMAGRALKQTGSRSIEAALEYI 866532100000000000000000000000000001000000000 SKMSGPSSG 000124689 >Zinc finger protein 435; SWP:NA; PDB:2COTA GSSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEK 999999999876654544344666543232221111111233222 PYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG 32346665321122211112223444446799 >ECT2 protein; SWP:NA; PDB:2COUA GSSGSSGFKVPPFQDCILSFLGFSDEEKHSMEEMTEMQGGSYLPV 998754210000000000000000000000000000000000000 GDERCTHLIVEENTVKDLPFEPSKKLFVVKQEWFWGSIQMDARAG 000000000000000000000000000000000000000000000 ETMYLYEKANTPESGPSSG 0000000124699999999 >Kinesin-like protein KIF1; SWP:NA; PDB:2COWA GSSGSSGQALASDSEEADEVPEWLREGEFVTVGAHKTGVVRYVGP 999999999999986321000000000000001111000000000 ADFQEGTWVGVELDLPSGKNDGSIGGKQYFRCNPGYGLLVRPSRV 010000000000000000000000000000000000000000000 RRATSGPSSG 0001356899 >CLIPR-59 protein; SWP:NA; PDB:2CP0A GSSGSSGGNLMLSALGLRLGDRVLLDGQKTGTLRFCGTTEFASGQ 999986421000000000000000000000000000000111100 WVGVELDEPEGKNDGSVGGVRYFICPPKQGLFASVSKISKAVDAS 000000000000000001000000000000000000000011356 GPSSG 89999 >CLIP-115; SWP:NA; PDB:2CP2A GSSGSSGAAEVGDDFLGDFVVGERVWVNGVKPGVVQYLGETQFAP 999865421000000000000000000000000000000000000 GQWAGVVLDDPVGKNDGAVGGVRYFECPALQGIFTRPSKLTRQPS 000000000000000000000000000000000000000000001 GPSSG 24689 >CLIP-115; SWP:NA; PDB:2CP3A GSSGSSGLRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEP 998642100000000000000000000000000000000000000 LGKNDGAVAGTRYFQCPPKFGLFAPIHKVIRIGSGPSSG 000000000000000000000000000000001357899 >Next to BRCA1 gene 1 prot; SWP:NA; PDB:2CP8A GSSGSSGQTAALMAHLFEMGFCDRQLNLRLLKKHNYNILQVVTEL 998643200000000000000000000000000000000000000 LQLSGPSSG 000124689 >Elongation factor Ts, mit; SWP:NA; PDB:2CP9A GSSGSSGSSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWL 997653210000000000000000000000000000000000000 HKEAQKEGWSKAASGPSSG 0000000002356899999 >KIAA0657 protein; SWP:NA; PDB:2CPCA GSSGSSGTDVSSWIVYPSGKVYVAAVRLERVVLTCELCRPWAEVR 987665432110000000000000000000000000000000000 WTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDDE 000000000000000000000000000000000000000000000 SASFTVTVTEPPVRIIYSGPSSG 00000000000001223556789 >APOBEC-1 stimulating prot; SWP:NA; PDB:2CPDA GSSGSSGDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVE 999999764321000000000000000000000000000000000 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVD 000000000000000000000000000000000000000000011 KDSSGPSSG 234567899 >RNA-binding protein EWS; SWP:NA; PDB:2CPEA GSSGSSGDPDEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMN 999999999864210000000000000000000000000000000 KRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDF 000000000000000000000000000000000000000000000 QGSKLKVSLARKKPPMNSGPSSG 00000000001356999999999 >RNA binding motif protein; SWP:NA; PDB:2CPFA GSSGSSGLFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAG 542100000000000000000000000000000000000000110 VLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISERATK 000000000000000000000000000000000000000012356 PASGPSSG 79999999 >RNA binding motif protein; SWP:NA; PDB:2CPHA GSSGSSGQVPKKQTTSKILVRNIPFQANQREIRELFSTFGELKTV 999999976542210000000000000000000000000000000 RLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLV 000011224310000000000000000000000000000000000 LEWADSEVTVQSGPSSG 00001112345789999 >CCR4-NOT transcription co; SWP:NA; PDB:2CPIA GSSGSSGASVRVVQKNLVFVVGLSQRLADPEVLKRPEYFGKFGKI 999999999865321000000000000000000000000000000 HKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDG 000000011234432110000000000000000000000000000 RTLKASLGTTKYCSYSGPSSG 000000001134578999999 >Non-POU domain-containing; SWP:NA; PDB:2CPJA GSSGSSGGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 999999999865320000000000000000000000000000000 FIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSA 000000000000000000000000000000000000000001234 SLTSGPSSG 567899999 >Sperm-associated antigen; SWP:NA; PDB:2CPMA GSSGSSGQKVEFRKRMEKEVSDFIQDSGQIKKKFQPMNKIERSIL 999754200000000000000000000000000000000000000 HDVVEVAGLTSFSFGEDDDCRYVMIFKKEFAPSDEELDSYRRGSG 000000000000000000000000000000000000000000134 PSSG 6799 >TAR RNA-binding protein 2; SWP:NA; PDB:2CPNA GSSGSSGPVSPQQSECNPVGALQELVVQKGWRLPEYTVTQESGPA 999999999999753100000000000000000000000000000 HRKEFTMTCRVERFIEIGSGTSKKLAKRNAAAKMLLRVSGPSSG 00000000000000000000000000000000000000013568 >Fragile X mental retardat; SWP:NA; PDB:2CPQA GSSGSSGTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPG 999999864210000000000000000000000000000000000 VTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPSGPSS 000000000000000000000000000000000011223456899 G 9 >Exosome component 10; SWP:NA; PDB:2CPRA GSSGSSGKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKT 999999875423332211101111110000000000000000000 ARREDESYGYVLPNHMMLKIAEELPKEPQGIIACCNPVPPLVRQQ 000000000000000000000000000000000000000000000 INEMHLLIQQAREMPLLKSEVAAGVKKSSGPSSG 0000000000000000123467999999999999 >Hypothetical protein FLJ1; SWP:NA; PDB:2CPXA GSSGSSGEEIRKIPMFSSYNPGEPNKVLYLKNLSPRVTERDLVSL 999887787666554322110000000000000000000000000 FARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGY 000001110000000000121100000000000000000000000 KLYGKILVIEFGKNKKQRSSGPSSG 0000000000001234567999999 >RNA-binding protein 12; SWP:NA; PDB:2CPYA GSSGSSGEGDVNSAKVCAHITNIPFSITKMDVLQFLEGIPVDENA 999988664311000000000000000000000000000000000 VHVLVDNNGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHV 000001111100000000000000000000000000000000000 VTLEDMREIEKNPPAQGKSGPSSG 000000000000001234567899 >CUG triplet repeat RNA-bi; SWP:NA; PDB:2CPZA GSSGSSGLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQM 999999986432110000000000000000000000000000000 FMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGF 000000000000000110000000000000000000000000000 QIGMKRLKVQLKRSKNDSKSGPSSG 0000000000001234678999999 >Eukaryotic translation in; SWP:NA; PDB:2CQ0A GSSGSSGPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRI 999999999864210000000000000000000000000000000 YLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVE 000000000000000000000000000000000000000000000 WAKPSTNSGPSSG 0023678999999 >PTB-like protein L; SWP:NA; PDB:2CQ1A GSSGSSGDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNI 999887655431100000000000000000000000000000000 LMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNH 000011000000000000000000000000000000000000011 KELKTSGPSSG 31123568999 >hypothetical protein LOC9; SWP:NA; PDB:2CQ2A GSSGSSGAKHTLLRHEGIETVSYATQSLVVANGGLGNGVSRNQLL 998643211100000000000000000000000000000000000 PVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVTLNGKEVVD 000000000000000000000000000000000000000000000 DLGQKITLYLNFVEKVQWSGPSSG 000000000000000000124679 >RNA-binding protein 9; SWP:NA; PDB:2CQ3A GSSGSSGNSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDV 999999975421100000000000000000000000000000000 EIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 000013321000000000000000000000000000000000000 TARVMTNSGPSSG 1345678999999 >RNA binding motif protein; SWP:NA; PDB:2CQ4A GSSGSSGKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDF 999999999999986432111100000000000000000000000 FSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQR 000000000000012344432100000000000000000000000 LLGVPIIVQASQAEKNRLSGPSSG 000000000001111122457999 >10-formyltetrahydrofolate; SWP:O75891; PDB:2CQ8A GSSGSSGFFKGAASSVLELTEAELVTAEAVRSVWQRILPKVLEVE 999999999987532100000000000000000000000000000 DSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDF 000000000000000000000000000000000000000000000 IQLLVRKLRGDDEESGPSSG 00000000013468999999 >RuvB-like 2; SWP:Q9Y230; PDB:2CQAA GSSGSSGKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEME 999998653210000000000000112332210000000011000 TIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARS 000000000000000000000000000000000000111235689 GPSSG 99999 >Peptidyl-prolyl cis-trans; SWP:NA; PDB:2CQBA GSSGSSGMATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIP 998866543210000000000000000000000000000000000 LDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAK 000000000000000000000000000000000000000000000 PMRIKESGPSSG 112356789999 >Arginine/serine-rich spli; SWP:P62995; PDB:2CQCA GSSGSSGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADV 999999999986321000000000000000000000000000000 SIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVS 000000101000000000000000000000000000000000000 GPSSG 02246 >RNA-binding region contai; SWP:NA; PDB:2CQDA GSSGSSGMHGSQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIE 999999877654310000000000000000000000000000000 EAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANV 000000111111000000000000000000000000000000000 NLAYLGAKPRSLQTGFAIGVSGPSSG 00000011223456789999999999 >KIAA1064 protein; SWP:Q9UPT8; PDB:2CQEA GSSGSSGELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTT 999876532211100011111111111111110000000000000 GNCINGDDCMFSHDPLTEETRELLDKMLADDAEAGAEDEKEVEEL 000001110000000000000000000000000136899999999 KKSGPSSG 99999999 >TAR DNA-binding protein-4; SWP:Q13148; PDB:2CQGA GSSGSSGVKRAVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMV 999999998754210000000000000000000000000000000 QVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLP 000001110000000000000000000000000000000000000 NSKQSQDSGPSSG 1222234567899 >IGF-II mRNA-binding prote; SWP:NA; PDB:2CQHA GSSGSSGMNKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLKSG 987653210000000000000000000000000000000000000 YAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKLRSSGP 000000000000000000000000000000000001234678999 SSG 999 >Nucleolysin TIAR; SWP:NA; PDB:2CQIA GSSGSSGMMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSC 999999998632100000000000000000000000000000000 KMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA 000001211000000000000000000000000000000000000 TTPSSQKSGPSSG 1245579999999 >U3 small nucleolar ribonu; SWP:Q9NV31; PDB:2CQJA GSSGSSGRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDP 997531000000000000000000000000000000000000000 AFLVTRSMEDFVTWVDSSKISGPSSG 00000000000000001122345679 >C-Mpl binding protein; SWP:Q71RC2; PDB:2CQKA GSSGSSGAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQ 998766532000000000000000000000000000000000000 FIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKVRPS 000000000000000000000000000000000000000000000 HKRCISGPSSG 01245799999 >60S ribosomal protein L9; SWP:NA; PDB:2CQLA GSSGSSGMKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDF 998765321111100000000000000000000000000000000 NHINVELSLLGKKKKRLRVDKWWGNRKELATVRTICSHVQNMIKG 000000000001010000000000000000000000000000000 VTLGSGPSSG 0001234578 >Ribosomal protein L17 iso; SWP:Q9NRX2; PDB:2CQMA GSSGSSGLLRNLLTGLVRHERIEAPWARVDEMRGYAEKLIDYGKL 998642000000000000000000000000000000000000000 GDTNERAMRMADFWLTEKDLIPKLFQVLAPRYKDQTGGYTRMLQI 000000000000000000000000000000000001000000000 PNRSLDRAKMAVIEYKGNCLPPLPLPSGPSSG 01232210000000001121233456799999 >Formin-binding protein 3; SWP:O75400; PDB:2CQNA GSSGSSGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEPAF 998642000000000000000000000000000000000000000 EDITLESERKRIFKDFMHVLEHECQHSGPSSG 00000000000000000000000013589999 >Nucleolar protein of 40 k; SWP:NA; PDB:2CQOA GSSGSSGMNSGRPETMENLPALYTIFQGEVAMVTDYGAFIKIPGC 999999999987643210000000000000000000000000000 RKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKV 000000000000010000000000000000000000000000000 SLSMKVVNQGTGKDLDPNNVIIESGPSSG 00000000000000000000000134689 >RNA-binding protein 12; SWP:Q8R4X3; PDB:2CQPA GSSGSSGASSGKPGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGS 998777665432100000000000000000000000000000000 VCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLV 000000000000000000000000000000000000000000000 LGSGPSSG 00134568 >DnaJ homolog subfamily C; SWP:Q96KC8; PDB:2CQQA GSSGSSGAPEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHELGRSV 976542100000000000000000000000000000000000000 TDVTTKAKQLKDSVTCSPGMVSGPSSG 000000000000012357899999999 >DnaJ homolog subfamily C; SWP:Q96KC8; PDB:2CQRA GSSGSSGSLRKERARSAEEPWTQNQQKLLELALQQYPRGSSDCWD 999999999875433211000000000000000000001110000 KIARCVPSKSKEDCIARYKLLVSGPSSG 0000000000000000000000013479 >peroxisomal D3,D2-enoyl-C; SWP:NA; PDB:2CQUA GSSGSSGMNRTAMRASQKDFENSMNQVKLLKKDPGNEVKLKLYAL 999999865432100000000000000000000000000000000 YKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQNYVD 000000000000000000000000000000000000000000000 LVSSLSPSLESSSQVEPGTDSGPSSG 00000001123456789999999999 >Myosin light chain kinase; SWP:Q15746; PDB:2CQVA GSSGSSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFR 753101000000000000000000000000000000000000000 KQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQ 000000000000000000000000000000000000000000000 AQVNLTVVDKPDPPAGTPSGPSSG 000000000013468999999999 >LAG1 longevity assurance; SWP:Q9D6K9; PDB:2CQXA GSSGSSGGIKDSPVNKVEPNDTLEKVFVSVTKYPDEKRLKGLSKQ 999999999986421000000000000000000000000000000 LDWSVRKIQCWFRHRRNQDKPSGPSSG 000000000000000000012245799 >Nuclear migration protein; SWP:O35685; PDB:2CR0A GSSGSSGKPNLGNGADLPNYRWTQTLAELDLAVPFRVSFRLKGKD 875431100000000000000000000000000000000000000 VVVDIQRRHLRVGLKGQPPVVDGELYNEVKVEESSWLIEDGKVVT 000000000000000000000000000000000000000000000 VHLEKINKMEWWNRLVTSDPEINTKSGPSSG 0000000000000000000000001345679 >Speckle-type POZ protein; SWP:O43791; PDB:2CR2A GSSGSSGKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKL 765432000000000000000000111100000000000111000 KWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAK 000000000000000000000000000000000000000000000 GEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKL 000000000000000000000000000000000000000000000 TLFCEVSVVQDSVNISGQSGPSSG 000000000012356789999999 >Basic fibroblast growth f; SWP:P11362; PDB:2CR3A GSSGSSGVEVESFLVHPGDLLQLRCRLRDDVQSINWLRDGVQLAE 987542100000000000000000000000000000000000000 SNRTRITGEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSD 000000000000000000000000000000000000000000000 ALPSGPSSG 001235689 >SH3 domain-binding protei; SWP:P78314; PDB:2CR4A GSSGSSGEDYEKVPLPNSVFVNTTESCEVERLFKATSPRGEPQDG 999865322110000000000000000000000000000000000 LYCIRNSSTKSGKVLVVWDETSNKVRNYRIFEKDSKFYLEGEVLF 000000012221000000000000000000000000000000000 VSVGSMVEHYHTHVLPSHQSLLLRHPYGYTSGPSSG 000000000000000000000000000000123579 >Reproduction 8; SWP:Q9QZ49; PDB:2CR5A GSSGSSGEVPDLPEEPSETAEEVVTVALRCPNGRVLRRRFFKSWN 998764311000000000000000000000000000000000000 SQVLLDWMMKVGYHKSLYRLSTSFPRRALEVEGGSSLEDIGITVD 000000000000000000000000000000000000000000000 TVLNVEEKEQSSQSGPSSG 0000000012468999999 >KIAA1556 protein; SWP:Q5VST9; PDB:2CR6A GSSGSSGLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPV 999986543210000000000000000000000000000000000 HWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEAG 000000000000000000000000000000000000000000000 DQRASAALRVTEKPSVFSRSGPSSG 0000000000000011211245799 >Paired amphipathic helix; SWP:Q62141; PDB:2CR7A GSSGSSGVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQS 999877544321100000000000000000000000000000000 IDTPGVIRRVSQLFHEHPDLIVGFNAFLPSGPSSG 00000000000000000000000000001123568 >Homeobox protein Hox-B13; SWP:NA; PDB:2CRAA GSSGSSGRKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATS 999998642100000000000000000000000000000000000 LSERQITIWFQNRRVKEKKSGPSSG 0000000000000000011245799 >nuclear receptor binding; SWP:NA; PDB:2CRBA GSSGSSGMEGPLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYL 876432101000000000000000000000000000000000000 SEAMKLTESEQAHLSLELQRDSHMKQLLLIQERWKRAKREERLKA 000000000000000000000000000000000000000001111 HSGPSSG 2356799 >HEF-like protein; SWP:NA; PDB:2CREA GSSGSSGLLARALYDNCPDCSDELAFSRGDILTILEQHVPESEGW 753211000000000000000000000000000000000000000 WKCLLHGRQGLAPANRLQILSGPSSG 00000000000000000000124579 >RAN binding protein 3; SWP:NA; PDB:2CRFA GSSGSSGTARKCLLEKVEVITGEEAESNVLQMQCKLFVFDKTSQS 999999999999999978654333210000000000000001000 WVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQ 000000000000000000000000000000010000000000000 MQIDKASEKSIHITAMDTEDQGVKVFLISASSKDTGQLYAALHHR 000000000000000000000000000000000000000000000 ILALRSRVESGPSSG 000000001234569 >Metastasis associated pro; SWP:NA; PDB:2CRGA GSSGSSGMEEWSASEACLFEEALEKYGKDFNDIRQDFLPWKSLTS 999865321100000000000000000000000000000000000 IIEYYYMWKTTDRYVQQKRSGPSSG 0000000001123456899999999 >Vav proto-oncogene; SWP:NA; PDB:2CRHA GSSGSSGKAEAEQNWWEGPPQDLSVHLWYAGPMERAGAESILANR 999999999999988654311000000000000000000000000 SDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKK 000000000001110000000000000000000000000000000 AFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKEPEKRTISRSGP 000000000000000000000000000000000000124677899 SSG 999 >SWI/SNF-related matrix-as; SWP:NA; PDB:2CRJA GSSGSSGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAE 654321000000000000000000000000000000000000000 WSKLQPAEKQRYLDEAEKEKQQYLKELWAYQQSEAYKVCTESGPS 000000000000000000000000000000010111123568999 SG 99 >Copper chaperone for supe; SWP:NA; PDB:2CRLA GSSGSSGMASDSGNQGTLCTLEFAVQMTCQSCVDAVRKSLQGVAG 999999987654321000000000000000000000000000000 VQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSGQL 000000000000000000000000000000000000000122468 QNSGPSSG 99999999 >Fibronectin type-III doma; SWP:NA; PDB:2CRMA GSSGSSGVVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDN 999999977654322111000000000000000000000000111 GGATINKYVVEMAEGSNGNKWEMIYSGATREHLCDRLNPGCFYRL 110000000000000011100000000000000000000000000 RVYCISDGGQSAVSESLLVQTPAVSGPSSG 000000010000000000000000236899 >UBASH3A protein; SWP:NA; PDB:2CRNA GSSGSSGSSPSLLEPLLAMGFPVHTALKALAATGRKTAEEALAWL 998754321100000000000000000000000000000000000 HDHCNDPSLDDPISGPSSG 0000111111121346799 >Regulator of G-protein si; SWP:NA; PDB:2CRPA GSSGSSGPEKPAKTQKTSLDEALQWRDSLDKLLQNNYGLASFKSF 999999999975421100000000000000000000000000000 LKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEFIQTEAP 000000000000000000000000000000000000000000000 KEVNIDHFTKDITMKNLVEPSLSSFDMAQKRIHALMEKDSLPRFV 000000000000000000000000000000000000000000000 RSEFYQELISGPSSG 000000000012346 >mitochondrial translation; SWP:NA; PDB:2CRQA GSSGSSGPKTGPTMTKELVFSSNIGQHDLDTKSKQIQQWIEKKYH 999876543322100000000000000000000000000000000 VQVTIKRRKDAEQSEEETEEIFNQILQTMPDIATFSSRPKAIRGG 000000012112111000000000000000000000000000001 TASMCVFRHLSKKEEKSGPSSG 0000000000122234567899 >Stromal membrane-associat; SWP:NA; PDB:2CRRA GSSGSSGKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASW 999988765433210000000000000000000000000000000 NIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTAEQIQCMQDMGN 000000000000000000000000000000000000000000000 TKARLLYEANLPENFRRPQTDQAVEFFIRDKYEKKKYYDKNAIAI 000000000000110000000000000000000000000000124 SGPSSG 689999 >Programmed cell death pro; SWP:NA; PDB:2CRUA GSSGSSGLRRQRLAELQAKHGDPGDAAQQEAKHREAEMRNSILAQ 999999999999999999999754322111110000000000000 VLDQSARARLSNLALVKPEKTKAVENYLIQMARYGQLSEKVSEQG 000000000000000001100000000000000000010000000 LIEILKKVSQQTEKTTTVKFNRSGPSSG 0000010112246999999999999999 >Translation initiation fa; SWP:NA; PDB:2CRVA GSSGSSGYPIGEASILATFTVTEGKKKIPVADCRVQKGQLERHKK 865421100000000000000001000000000000000000000 FKLIRNGQVIWKGSLTSLKHHKDDISVIKTGMDCGLSLDEEKVEF 000000000000000000001100000000000000000000000 KPGDQVICYEENKVPTKTSWDPGFSGPSSG 000000000011234567999999999999 >ADP-ribosylation factor G; SWP:NA; PDB:2CRWA GSSGSSGMGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASI 998654210000000000000000000000000000000000000 TYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGG 000000000000000000000000000000000000000000000 NASASSFFHQHGCSTNDTNAKYNSRAAQLYREKIKSLASQATRKH 000000000000000000000000000000000000000000011 GTDLWLDSSGPSSG 11000123456667 >Kin of IRRE-like protein; SWP:NA; PDB:2CRYA GSSGSSGTLTVNGPPIISSTQTQHALHGEKGQIKCFIRSTPPPDR 999865421000000000000111011100000000000000000 IAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQT 000000000000000100000000000000000000000000000 IYNCTAWNSFGSDTEIIRLKEQGSEMSGPSSG 00000000000000000000112356789999 >Fibronectin type-III doma; SWP:NA; PDB:2CRZA GSSGSSGPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYS 864210000000000000000000000000000000000000000 VEMSPIEKDEPREVYQGSEVECTVSSLLPGKTYSFRLRAANKMGF 000000000000000000000000000000000000000000000 GPFSEKCDITTAPGSGPSSG 00000000000000135579 >Hematopoietic SH2 domain; SWP:NA; PDB:2CS0A GSSGSSGGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRVS 999999997642100000000000000000000000000000000 HSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALV 000000000000000000000000000000000000000000000 TFHQQKPIEPRRELLTQPCRQKDSGPSSG 00000000000000000000002346799 >PMS1 protein homolog 1; SWP:NA; PDB:2CS1A GSSGSSGIKKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEEL 976532211000000000000000000010000000000000000 WKTLSEEEKLKYEEKATKDLERYNSQMKRAIEQESQMSLKDSGPS 000000000000000000000000000111122223456789999 SG 99 >Protein C12orf2; SWP:NA; PDB:2CS4A GSSGSSGMELKVWVDGVQRIVCGVTEVTTCQEVVIALAQAIGRTG 765321000000000000000000000000000000000001111 RYTLIEKWRDTERHLAPHENPIISLNKWGQYASDVQLILRRTGPS 000000000000000000000000000000000000000001134 GPSSG 56789 >Tyrosine-protein phosphat; SWP:NA; PDB:2CS5A GSSGSSGNGGIPHDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIV 999999999764321000000000111000000000000000000 SRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKAS 000000000000000000000000000000000000000000000 CERHSGELMLLVRPNAVYDVVEESGPSSG 01122100000000113568999999999 >DNA-binding protein SATB2; SWP:Q9UPW6; PDB:2CSFA GSSGSSGPIKVDGANINITAAIYDEIQQEMKRAKVSQALFAKVAA 999999998755310000000000000000000000000000000 NKSQGWLCELLRWKENPSPENRTLWENLCTIRRFLNLPQHERDVI 000000000000000000000000000000000000000000000 YEEESSGPSSG 00000013468 >Zinc finger protein 297B; SWP:O43298; PDB:2CSHA GSSGSSGDKLYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGK 999999999988789999897666544433444566766688986 KFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTK 667899878877887777554334544334566654454345456 SYEAAKAEQNTTEASGPSSG 77799999999999999999 >RIM binding protein 2; SWP:O15034; PDB:2CSIA GSSGSSGRRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEI 765321000000000000000000000000000000000000000 DEDGFYYGELNGQKGLVPSNFLEEVSGPSSG 0000000000000000000000000124679 >Tjp2 protein; SWP:NA; PDB:2CSJA GSSGSSGMEEVIWEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGE 998765321000000000000000000000000000000000000 TSIVISDVLPGGPADGLLQENDRVVMVNGTPMEDVLHSFAVQQLR 000000000000000000000000000000000000000000000 KSGKIAAIVVKRPRKVQVAPLSGPSSG 000000000000000112345789999 >Sorting nexin 12; SWP:Q9UMY4; PDB:2CSKA GSSGSSGSNFLEIDIFNPQTVGVGRARFTTYEVRMRTNLPIFKLK 865432100000000000000123211000000000000000000 ESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEG 000000000000000000011110000000012345666665432 IFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQEEAIDRN 210000000000000000000000000000000000000000001 YVPGKSGPSSG 01134567899 >Pleckstrin; SWP:P08567; PDB:2CSOA GSSGSSGRSIRLPETIDLGALYLSMKDTEKGIKELNLEKDKKIFN 986544321100000000000000000000000000000000000 HCFTGNCVIDWLVSNQSVRNRQEGLMIASSLLNEGYLQPAGDMSK 000000000000000000000000000000000000000000000 SAVDGTAENPFLDNPDAFYYFPDSGFFCEENSGPSSG 0000110000000000000000000000000124689 >RIM binding protein 2; SWP:O15034; PDB:2CSPA GSSGSSGVEFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLT 999999998642110000000000000000000000000000000 PTGLSNGANVTGYGVYAKGQRVAEVIFPTADSTAVELVRLRSLEA 000000000000000000000000000000000000000000000 KGVTVRTLSAQGESVDSAVAAVPPELLVPPTPHPSGPSSG 0000000000000000000000000000001245899999 >RIM binding protein 2; SWP:O15034; PDB:2CSQA GSSGSSGTDPGAEELPARIFVALFDYDPLTMSPNPDAAEEELPFK 999999997653210000000000000000000000000000000 EGQIIKVYGDKDADGFYRGETCARLGLIPCNMVSEIQADDEEMMD 000000000000000000000000000000000000124568999 QSGPSSG 9999999 >Regulating synaptic membr; SWP:Q86UR5; PDB:2CSSA GSSGSSGVTWQPSKEGDRLIGRVILNKRTTMPKDSGALLGLKVVG 743100000000000000000000000011122111000000000 GKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGA 000000000000000000000000000000000000000000000 TNEEVYNIILESKSEPQVEIIVSRPSGPSSG 0000000000000000000000000013579 >Tripartite motif protein; SWP:Q14134; PDB:2CSVA GSSGSSGQLLEPIRDFEARKCPVHGKTMELFCQTDQTCICYLCMF 999999999975332110000000000000000000000000000 QEHKNHSTVTVEEAKAEKETESGPSSG 000000000000000000013589999 >Ubiquitin ligase protein; SWP:O76064; PDB:2CSWA GSSGSSGVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFG 999999999853100000000000000000000000000000010 VTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRA 000000000000000000000000000000000000000000000 RLEPLRVYSIHQGDYIQLGVPLENKENAEYEYEVTEEDWETIYPC 000000000000000000000011000000000000000000000 LSPKSGPSSG 0000012346 >Non-SMC element 1 homolog; SWP:Q8WV22; PDB:2CT0A GSSGSSGRETYPDAVKICNICHSLLIQGQSCETCGIRMHLPCVAK 999998753235531000000000000000000000000000000 YFQSNAEPRCPHCNDYWPHEIPKSGPSSG 00011100000000100000000123467 >Transcriptional repressor; SWP:P49711; PDB:2CT1A GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAK 999999997643000000000000000000000000000000000 FHCPHCDTVIARKSDLGVHLRKQHSYSGPSSG 00000000000000000000000000135689 >Tripartite motif protein; SWP:Q13049; PDB:2CT2A GSSGSSGNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQC 999987653211100000000000000000000000000000000 LEKLLASSINGVRCPFCSKITRITSLTQLTDNLTVLKSGPSSG 0000000001000000000000000000000000000235689 >Vinexin; SWP:O60504; PDB:2CT3A GSSGSSGTPYRAMYQYRPQNEDELELREGDRVDVMQQCDDGWFVG 865421000000000000000000000000000000000000000 VSRRTQKFGTFPGNYVAPVSGPSSG 0000000000000000000012468 >Cdc42-interacting protein; SWP:NA; PDB:2CT4A GSSGSSGGHCVAIYHFEGSSEGTISMAEGEDLSLMEEDKGDGWTR 988642100000000000111100000000000000000000000 VRRKEGGEGYVPTSYLRVTSGPSSG 0000000000000000000124579 >sh3 domain-binding glutam; SWP:NA; PDB:2CT6A GSSGSSGMVIRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVD 865432100000000001000000000000000000000000000 ITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIFNGDRYCGDYDSFF 000000000000000000000110000000000000000000000 ESKESNTVFSFLGLKSGPSSG 000000000000001234345 >RING finger protein 31; SWP:NA; PDB:2CT7A GSSGSSGALFHKKLTEGVLMRDPKFLWCAQCSFGFIYEREQLEAT 999999999999999997531100000001000000000100000 CPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNSGPSSG 00000000000000000000000000000000000013467 >Zinc finger protein 512; SWP:NA; PDB:2CTDA GSSGSSGRIRKEPPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGR 999999999998765556654333223223333222334444332 KTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP 211221222233345555789999764443442223334565799 SGPSSG 999999 >Vigilin; SWP:NA; PDB:2CTEA GSSGSSGDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELK 999999876654321000000000000000000000000000000 TATKIQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAEQDKRSG 000000000000000000000000000000000000000000124 PSSG 6799 >Vigilin; SWP:NA; PDB:2CTFA GSSGSSGEPEKLGQALTEVYAKANSFTVSSVAAPSWLHRFIIGKK 999999999999999999976532100000000000000000011 GQNLAKITQQMPKVHIEFTEGEDKITLEGPTEDVSVAQEQIEGMV 000000000000000000000000000000000000000000000 KDLINRSGPSSG 000000124579 >Vigilin; SWP:NA; PDB:2CTJA GSSGSSGSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEE 999999999764210000000000000000000000000000000 CGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKS 000000000000100000000000000000000000000000134 GPSSG 69999 >Vigilin; SWP:NA; PDB:2CTKA GSSGSSGKEALEALVPVTIEVEVPFDLHRYVIGQKGSGIRKMMDE 999998754321000000000000000000000110000000000 FEVNIHVPAPELQSDIIAITGLAANLDRAKAGLLERVKELQAEQE 000000000000000000000000000000000000000000000 DRALRSFKSGPSSG 00011468999999 >Vigilin; SWP:NA; PDB:2CTLA GSSGSSGEQEDRALRSFKLSVTVDPKYHPKIIGRKGAVITQIRLE 999875432100000000000000000000000000000000000 HDVNIQFPDKDDGNQPQDQITITGYEKNTEAARDAILRIVGELEQ 000000000000000000000000000000000000000000000 MSGPSSG 0235799 >Vigilin; SWP:NA; PDB:2CTMA GSSGSSGRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDE 876432110000000000000000000000000000000000000 FKVDIRFPQSGAPDPNCVTVTGLPENVEEAIDHILNLEEEYLADS 000000000000000000000000000000000000000000001 GPSSG 24579 >novel protein; SWP:NA; PDB:2CTOA GSSGSSGMPNRKASRNAYYFFVQEKIPELRRRGLPVARVADAIPY 999999999864210000000000000000000000000000000 CSSDWALLREEEKEKYAEMAREWRAAQGKDPGPSEKQKPVFTSGP 000000000000000000000000000024689999999999999 SSG 999 >DnaJ homolog subfamily B; SWP:NA; PDB:2CTPA GSSGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGA 754432000000000000000000000000000000000010100 TEAFKAIGTAYAVLSNPEKRKQYDQFGSGPSSG 000000000000000000000000001357899 >DnaJ homolog subfamily C; SWP:NA; PDB:2CTQA GSSGSSGMDAILNYRSEDTEDYYTLLGCDELSSVEQILAEFKVRA 999999999999976532210000000000000000000000000 LECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 000000001111000000000000000000000000000000000 SMPFQQWEALNDSVKTSGPSSG 0000000000112346689999 >DnaJ homolog subfamily B; SWP:NA; PDB:2CTRA GSSGSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDA 654311000000000000000000000000000000000000000 EAKFREIAEAYETLSDANRRKEYDTLGHSAFTSGKGQSGPSSG 0000000000000000000000000000000013344567799 >DnaJ homolog subfamily A; SWP:NA; PDB:2CTTA GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKV 999999999999999999999996321000000000000000000 QHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIIISPCVVCRGA 000000000000000000000000000000000000000000000 GQAKQKKRSGPSSG 00001246799999 >DnaJ homolog subfamily C; SWP:NA; PDB:2CTWA GSSGSSGRQRSLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKY 999999999987653211000000000000000000000000000 HPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLYVA 011111110000000000000000000000000000000000000 EQFGEENVNTYFVSGPSSG 0110000001001246789 >KIAA1915 protein; SWP:NA; PDB:2CU7A GSSGSSGYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQ 999976422100000000000000000000000000000000000 VKSYARQYFKNKVKCGLDKETPNQKTG 000000000000134689999999999 >Cysteine-rich protein 2; SWP:NA; PDB:2CU8A GSSGSSGMASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKT 765443211000000000000000000000000000000000000 LTPGGHAEHDGKPFCHKPCYATLFGSGPSSG 0000000000000000000000001247899 >Cytoplasmic protein NCK1; SWP:NA; PDB:2CUBA GSSGSSGDPGERLYDLNMPAYVKFNYMAEREDELSLIKGTKVIVM 999997643210000000000000000000000000000000000 EKCSDGWWRGSYNGQVGWFPSNYVTEEGDSPLGDHVGSGPSSG 0000000000000000000000000001357999999999999 >SH3 domain containing rin; SWP:NA; PDB:2CUCA GSSGSSGNMFVALHTYSAHRPEELDLQKGEGIRVLGKYQDGWLKG 976542000000000000000000000000000000000000000 LSLLTGRTGIFPSDYVIPVSGPSSG 0000000000000000000023689 >SRC-like-adapter; SWP:NA; PDB:2CUDA GSSGSSGPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVI 999999976654321000000000000000000000000000000 SDEGGWWKAISLSTGRESYIPGICVARVSGPSSG 0000000000000000000000000000124679 >Paired box protein Pax6; SWP:NA; PDB:2CUEA GSSGSSGQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 999976543321000000000000000000000000000000000 LPEARIQVWFSNRRAKWRREEKLRNQRRQSGPSSG 00000000000000000000000001113578999 >FLJ21616 protein; SWP:NA; PDB:2CUFA GSSGSSGRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACN 999999865321000000000000000000000000000000000 AVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIAAILESS 000000000000000000000000000000000000013577999 GPSSG 99999 >mKIAA0962 protein; SWP:NA; PDB:2CUGA GSSGSSGILQSLSALDFDPYRVLGVSRTASQADIKKAYKKLAREW 999877765554310000000000000000000000000000000 HPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGPSSG 0000000000000000000000000000000000011236799 >Tenascin-X; SWP:NA; PDB:2CUHA GSSGSSGPDGPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAP 987543110000000001011100000000000000000000000 GAPPLQAETPGSAVDYPLHDLVLHTNYTATVRGLRGPNLTSPASI 000000000000000000000000000000000000000000000 TFTTGLEAPRDLEAKEVTPSGPSSG 0000112355434678999999999 >Tenascin-X; SWP:NA; PDB:2CUIA GSSGSSGSRPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGV 999976430000000000000000000000000000000000000 PSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGTLYSLTLYGL 000111111100000000000000000000000000000000000 RGPHKADSIQGTARTLSGPSSG 0000000000000000012357 >Tenascin-X; SWP:NA; PDB:2CUMA GSSGSSGLEAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTP 754432100000000000000000000000000000000000000 GGQTQEILLPGGITSHQLLGLFPSTSYNARLQAMWGQSLLPPVST 100000000100000000000000000000000001000000000 SFTTGGLRISGPSSG 000000012345689 >Skeletal muscle LIM-prote; SWP:NA; PDB:2CUPA GSSGSSGCVECRKPIGADSKEVHYKNRFWHDTCFRCAKCLHPLAN 986543333344433444432221222222332222333322123 ETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVW 211122332111122223343357999987567987434687534 HKDCFSGPSSG 67886668999 >Four and a half LIM domai; SWP:NA; PDB:2CUQA GSSGSSGPCYENKFAPRCARCSKTLTQGGVTYRDQPWHRECLVCT 999999976543210000000000001100000000000000000 GCQTPLAGQQFTSRDEDPYCVACFGELFASGPSSG 00000000000000000000000000000135689 >Skeletal muscle LIM-prote; SWP:NA; PDB:2CURA GSSGSSGCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKLAGQR 654321000000000000000000000000000000000000000 FTAVEDQYYCVDCYKNFVSGPSSG 000000000000000000123468 >SN4m; SWP:NA; PDB:2CW1A MRKKLDLKKFVEDKNQEYAARALGLSQKLIEEVLKRGLPVYVETN 100000000000000000000001000000000000000000000 KDGNIKVYITQDGITQPFPP 10000000000110000011 >chimera of Immunoglobulin; SWP:NA; PDB:2CWBA MHHHHHHQYKLALNGKTLKGETTTEAVDAATAEKVFKQYANDNGV --------------------------------------------- DGEWTYDDATKTFTVTEGSQWQPQLQQLRDMGIQDDELSLRALQA -----------------4210000000000000000000000000 TGGDIQAALELIFAGGAP 000000000000012124 >S100 calcium-binding prot; SWP:P97352; PDB:2CXJA MAAETLTELEAAIETVVSTFFTFAGREGRKGSLNINEFKELATQQ 111100000000000000000000000111000000000000000 LPHLLKDVGSLDEKMKTLDVNQDSELRFSEYWRLIGELAKEVRKE 000000000000000000000000000000000000000000000 KALGIRKK 00000001 >Bud emergence protein 1; SWP:P29366; PDB:2CZOA GPLGSKPQNKSAKLVDGELLVKASVESFGLEDEKYWFLVCCELSN ---------210000110000000000000010000000000000 GKTRQLKRYYQDFYDLQVQLLDAFPAEAGKLRDAGGQWSKRIMPY 100000000000000000000000000000112343221100000 IPGPVPYVTNSITKKRKEDLNIYVADLVNLPDYISRSEMVHSLFV 111222110000000000000000000000000000000000000 VLNNGFDREFERDENQNNIK 0112---------------- >Wnt inhibitory factor-1; SWP:Q9Y5W5; PDB:2D3JA GSHMLDQQEESLYLWIDAHQARVLIGFEEDILIVSEGKMAPFTHD 999986431000000000000011100000000000000000000 FRKAQQRMPAIPVNIHSMNFTWQAAGQAEYFYEFLSLRSLDKGIM 001121100000000000000000000000000000000000000 ADPTVNVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEVDVIVMNS 000000000000000000000000000000000000000000000 EGNTILQTPQNAIFFKTCLQAE 0000000000000000000011 >calcium channel, voltage-; SWP:O00305; PDB:2D46A GSHMYDNLYLHGIEDSEAGSADSYTSRPSDSDVSLEEDREAIRQE 000000000000000000000000000000000000000000000 REQQAAIQLERAKSKP 0000000000000000 >ASABF; SWP:P90683; PDB:2D56A AVDFSSCARMDVPGLSKVAQGLCISSCKFQNCGTGHCEKRGGRPT 976532233332210000000000000000000000001111000 CVCDRCGR 00000113 >WD repeat and HMG-box DNA; SWP:O75717; PDB:2D7LA GSSGSSGRPKTGFQMWLEENRSNILSDNPDFSDEADIIKEGMIRF 999864321000000000000000000000000000000000000 RVLSTEERKVWANKAKGETASEGTEAKKRKSGPSSG 000000000000000013579999999999999999 >Filamin-C; SWP:Q14315; PDB:2D7MA GSSGSSGAHDASKVRASGPGLNASGIPASLPVEFTIDARDAGEGL 765532100000000000000000000000000000000000000 LTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGG 000000000000000000000000000000000000000000000 DEIPYSPFRIHALPTGDASSGPSSG 0000000000000002334322356 >Filamin-C; SWP:Q14315; PDB:2D7NA GSSGSSGLRPFNLVIPFAVQKGELTGEVRMPSGKTARPNITDNKD 754321000000000000010000000000000000000000000 GTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYVDAINSRHSGP 000000000000000000000000000000000000001246678 SSG 899 >Filamin-C; SWP:Q14315; PDB:2D7OA GSSGSSGAINSRHVSAYGPGLSHGMVNKPATFTIVTKDAGEGGLS 999998754310000000000000000000000000000110000 LAVEGPSKAEITCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIP 000000000000000000000000000000000000000000000 GSPFTAKITGDDSMRSGPSSG 000000000013467899999 >Filamin-C; SWP:Q14315; PDB:2D7PA GSSGSSGSDDARRLTVTSLQETGLKVNQPASFAVQLNGARGVIDA 999975421000000000000000000000000000000000000 RVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHI 000000000000000001000000000000000000000000000 PGSPFKIRVGEQSQAGSGPSSG 0000000000123456899999 >Filamin-C; SWP:Q14315; PDB:2D7QA GSSGSSGAGDPGLVSAYGPGLEGGTTGVSSEFIVNTLNAGSGALS 999865310000000000000000000000000000000000000 VTIDGPSKVQLDCRECPEGHVVTYTPMAPGNYLIAIKYGGPQHIV 000000000000000000000000000000000000000000000 GSPFKAKVTGPRLSGSGPSSG 000000000000012468999 >L-plastin; SWP:P13796; PDB:2D85A GSSGSSGNDDIIVNWVNETLREAEKSSSISSFKDPKISTSLPVLD 998754210000000000000000000000000000000000000 LIDAIQPGSINYDLLKTENLNDDEKLNNAKYAISMARKIGARVYA 000000000000000000000000000000000000000000000 LPEDLVEVNPKMVMTVFACLMGKGMKRVSGPSSG 0000000000000000000000012347999999 >Smoothelin splice isoform; SWP:P53814; PDB:2D87A GSSGSSGIKQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALV 986431000000000000000000000000000000000000000 HNFFPEAFDYGQLSPQNRRQNFEVAFSSAETHADCPQLLDTEDMV 000000000000000000000000000000000000000000000 RLREPDWKCVYTYIQEFYRCLVQKGLVKTKKSSGPSSG 00000000000000000000000000011234679999 >Protein MICAL-3; SWP:Q7RTP6; PDB:2D88A GSSGSSGVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCA 999999753100000000000000000000000000000000000 IIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMTGKE 000000000000000000000000000000000000000000000 MASVGEPDKLSMVMYLTQFYEMFKDSGPSSG 0000000000000000000000000123569 >EHBP1 protein; SWP:Q8NDI1; PDB:2D89A GSSGSSGPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCA 766543211100000000000000000000000000000000000 ILHHFRPDLIDYKSLNPQDIKENNKKAYDGFASIGISRLLEPSDM 000000000000000000000000000000000000000000000 VLLAIPDKLTVMTYLYQIRAHFSSGPSSG 00000000000000000000000013457 >Twinfilin-1; SWP:Q91YR1; PDB:2D8BA GSSGSSGEVQTDVSVDTKHQTLQGVAFPISRDAFQALEKLSKKQL 999999999999999998654310000000000000000000000 NYVQLEIDIKNETIILANTENTELRDLPKRIPKDSARYHFFLYKH 000000000000000000000000000000000000000000000 SHEGDYLESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQ 000000000000000000000000000000000000000000000 MDVIRKIEIDNGDELTADFLYDEVHSGPSSG 0000000000000000000000000023568 >Phosphatidylcholine:ceram; SWP:Q8VCQ6; PDB:2D8CA GSSGSSGMLSARTMKEVVYWSPKKVADWLLENAMPEYCEPLEHFT 999999975321000000000000000000000000000000000 GQDLINLTQEDFKKPPLYRVSSDNGQRLLDMIETLKMEHHMEAHK 000000000000000000000000000000000000000001357 NSGPSSG 9999999 >SH3YL1 protein; SWP:Q9Y3V5; PDB:2D8HA GSSGSSGHERVGNLNQPIEVTALYSFEGQQPGDLNFQAGDRITVI 999998764432100000000000000000100000000000000 SKTDSHFDWWEGKLRGQTGIFPANYVTMNSGPSSG 00000000000000000000000000001234679 >T-cell lymphoma invasion; SWP:Q59GK8; PDB:2D8IA GSSGSSGEIEICPKVTQSIHIEKSDTAADTYGFSLSSVEEDGIRR 999999998543100000000000111000000000000000000 LYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ 000000011000000000000000000000000000000000000 PSLGLLVRTYPELEEGVESGPSSG 000000000001233578999999 >fyn-related kinase; SWP:Q8BPC1; PDB:2D8JA GSSGSSGQYFVALFDYQARTAEDLSFRAGDKLQVLDTSHEGWWLA 987531000000000000000000000000000000000100000 RHLEKKGTGLGQQLQGYIPSNYVAEDSGPSSG 00001234443100000000000000012457 >synaptotagmin VII; SWP:Q62747; PDB:2D8KA GSSGSSGSRENLGRIQFSVGYNFQESTLTVKIMKAQELPAKDFSG 999875421100000000000000000000000000000000110 TSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKV 000000000000000000000000000000000000000000000 VQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 000000000000112210000000000000000000000000000 SGPSSG 013689 >DNA-repair protein XRCC1; SWP:P18887; PDB:2D8MA GSSGSSGEPRRPRAGPEELGKILQGVVVVLSGFQNPFRSELRDKA 999999998754310000000000000000000000000000000 LELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVL 000000000000000000000000000000000000000000000 DCHRMRRRLPSQRYLMAGPGSSSEEDEASHSGGSGPSSG 000000000000000001222344456778999999999 >THAP domain-containing pr; SWP:Q9H0W7; PDB:2D8RA GSSGSSGMPTNCAAAGCATTYNKHINISFHRFPLDPKRRKEWVRL 999986532100000101011222100000000000000000000 VRRKNFVPGKHTFLCSKHFEASCFDLTGQTRRLKMDAVPTIFDFC 001110001100000000001000011211000000000011235 THISGPSSG 678999999 >RING finger protein 146; SWP:Q9NTX7; PDB:2D8TA GSSGSSGNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGA 999999999753200000000000000000000000000000000 SWLGKRCALCRQEIPEDFLDSGPSSG 00010000000000000001235679 >Ubiquitin ligase TRIM63; SWP:Q969Q1; PDB:2D8UA GSSGSSGHPMCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEV 999865321001011110000000000000000000000000000 APLQSVFQGQKTESGPSSG 0001112222223456799 >Zinc finger FYVE domain-c; SWP:Q9DAZ9; PDB:2D8VA GSSGSSGLPWCCICNEDATLRCAGCDGDLYCARCFREGHDNFDLK 876431000000000000000000000000000000000000000 EHQTSPYHPRRPCQEHSGPSSG 0000000001123457899999 >Protein PINCH; SWP:P48059; PDB:2D8XA GSSGSSGCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIG 865310000000000000000000000000000000000000000 FVKNAGRHLCRPCHNREKASGPSSG 0000000000000000000135679 >EPLIN protein; SWP:Q53GG0; PDB:2D8YA GSSGSSGMKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRC 999999998643210000000000000000000000000000000 SYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGSGPSS 000000000000000000000000000000134689999999999 G 9 >Four and a half LIM domai; SWP:Q4G0X1; PDB:2D8ZA GSSGSSGCVQCKKPITTGGVTYREQPWHKECFVCTACRKQLSGQR 654200000000000000000000000000000000000000100 FTARDDFAYCLNCFCDLYASGPSSG 0000000000000000000124679 >InaD-like protein; SWP:Q8NI35; PDB:2D92A GSSGSSGELALWSPEVKIVELVKDCKGLGFSILDYQDPLDPTRSV 999865310000000000000000000000000000000000000 IVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILK 000000000000000000000000000000000000000000000 AVPPGLVHLGICSGPSSG 000000000000000023 >Rap guanine nucleotide ex; SWP:Q8TEU7; PDB:2D93A GSSGSSGDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVE 876542111000000000000000000000000000000000000 QAGAIILEDGQELDSWYVILNGTVEISHPDGKVENLFMGNSFGIT 000000000000000000000000000000000000000000000 PTLDKQYMHGIVRTKVDDCQFVCIAQQDYWRILNHVEKSGPSSG 00000000000000000000000000000000000112222357 >General transcription fac; SWP:Q9UHL9; PDB:2D99A GSSGSSGLRKMVEEVFDVLYSEALGRASVVPLPYERLLREPGLLA 543211000000000000000000000000000000000000000 VQGLPEGLAFRRPAEYDPKALMAILEHSHRIRFKLKRPSSGPSSG 000000000000000000000000000000000000124567789 >Myb-related protein B; SWP:P48972; PDB:2D9AA GSSGSSGKVKWTHEEDEQLRALVRQFGQQDWKFLASHFPNRTDQQ 999865311000000000000000000000000000000000000 CQYRWLRVLSGPSSG 000000000013589 >General transcription fac; SWP:NA; PDB:2D9BA GSSGSSGMSVDAVEIETLRKTVEDYFCFCYGKALGKSTVVPVPYE 999864210000000000000000000000000000000000000 KMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGISFII 000000000000000000000000000000000000000000000 KRPFLEPKKHVGGSGPSSG 0000012445689999999 >Peregrin; SWP:NA; PDB:2D9EA GSSGSSGFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIK 753100000000000000000000000000000000000000000 KPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFY 000000000000000000000000000000000000000000000 RAAVRLREQGGAVLRQARRQAEKMGSGPSSG 0000000000000000000000001246799 >Zinc finger protein 692; SWP:NA; PDB:2D9HA GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCG 876542212122222111111101100000001111100011111 KRFEKPDSVAAHRSKSHPALLLAPQESSGPSSG 110001110111111111111223356899999 >NEDD4-binding protein 2; SWP:NA; PDB:2D9IA GSSGSSGQNVLDLHGLHVDEALEHLMRVLEKKTEEFKQNGGKPYL 998654310000000000000000000000000000000000000 SVITGRGNHSQGGVARIKPAVIKYLISHSFRFSEIKPGCLKVMLK 000012333343211000000000000000000000000000000 SGPSSG 124699 >FLN29 gene product; SWP:NA; PDB:2D9KA GSSGSSGHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTEL 999999999997532100000000000000000000000000000 CGNCGRNVLVKDLKTHPEVCGREGSGPSSG 011110000000000000001234689999 >Cleavage and polyadenylat; SWP:NA; PDB:2D9NA GSSGSSGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYS 877542100000000000000000000000000000000000000 KFGECSNKECPFLHIDPESKIKDCPWSGPSSG 00000000000000000001122233456668 >DnaJ (Hsp40) homolog, sub; SWP:NA; PDB:2D9OA GSSGSSGQGTPKLKLKWKCKKEDESKGGYSKDVLLRLLQKYGEVL 999975320000000000012333211000000000000000000 NLVLSSKKPGTAVVEFATVKAAELAVQNEVGLVDNPLKISWLEGQ 000001100000000000000000000000000000000000000 PQDASGPSSG 0124679999 >Polyadenylate-binding pro; SWP:NA; PDB:2D9PA GSSGSSGDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSA 999987644321100000000000000000000000000000000 KVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 000011100000000000000000000000000000000000000 QRKEERQSGPSSG 1234678999999 >Tudor domain-containing p; SWP:NA; PDB:2D9TA GSSGSSGKVWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKF 998653100000000000000000000000000000000000000 TDYGNYEEVLLSNIKPVQTEAWVRDPNSGPSSG 000000000000000000124589999999999 >Pleckstrin homology domai; SWP:NA; PDB:2D9VA GSSGSSGLVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETA 998642000000000000111000000000000000000000010 QDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLLTVNLREGS 000000000000000000000011000000000000000000000 RLHLCAETRDDAIAWKTALMEANSTPAPAGATVPSGPSSG 0000000000000000000000000001246899999999 >Docking protein 2; SWP:NA; PDB:2D9WA GSSGSSGMGDGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCAL 999999875310000000000023221100000000000122321 ARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSPRDTSA 000000113345543311000000000000000111000010000 FFLETKERLYLLAAPAAERGDWVQAICLLAFSGPSSG 0000000000000000000000000000000023579 >Oxysterol binding protein; SWP:NA; PDB:2D9XA GSSGSSGENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQ 987644210000000000000000000000000000000000000 SRNQKPRGTLQLAGAVISPSDEDSHTFTVNAASGEQYKLRATDAK 000000000000000000000000000000000000000000000 ERQHWVSRLQICTQHHTEAIGKNNSGPSSG 000000000000000000002479999999 >Pleckstrin homology domai; SWP:NA; PDB:2D9YA GSSGSSGNAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKD 998753211000000000000111100000000000000000000 EKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFS 000000000000100000000000100000000000110000000 AESPEEQEAWIQAMGEAARVQSGPSSG 000000000000000000012357899 >130-kDa phosphatidylinosi; SWP:NA; PDB:2DA0A GSSGSSGYGSEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHAT 764321000000000000011111000000000000000000123 SNRQPAKLNLLTCQVKPNAEDKKSFDLISHNRTYHFQAEDEQDYV 431100000000000000000100000000000000000000000 AWISVLTNSKEEALTMAFSGPSSG 000000000000000011357899 >Alpha-fetoprotein enhance; SWP:NA; PDB:2DA1A GSSGSSGKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSG 999999975311000000000000000000000000000000000 LPQKVIKHWFRNTLFKERQSGPSSG 0000000000000000001235689 >Alpha-fetoprotein enhance; SWP:NA; PDB:2DA2A GSSGSSGRSSRTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLN 999998753210000000000000000000000000000000000 LPTRVIVVWFQNARQKARKSGPSSG 0000000000000000002346899 >Hypothetical protein DKFZ; SWP:NA; PDB:2DA4A GSSGSSGALQDRTQFSDRDLATLKKYWDNGMTSLGSVCREKIEAV 999999986432100000000000000000000000000000000 ATELNVDCEIVRTWIGNRRRKYRLMGIEVSGPSSG 00000000000000000000000011111235689 >Zinc fingers and homeobox; SWP:NA; PDB:2DA5A GSSGSSGPTKYKERAPEQLRALESSFAQNPLPLDEELDRLRSETK 999999976421000000000000000000000000000000000 MTRREIDSWFSERRKKVNAEETKKSGPSSG 000000000000000000011356889999 >SH3-domain kinase binding; SWP:NA; PDB:2DA9A GSSGSSGDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWW 976532000000000000000000000000000000000000000 EGELNGRRGVFPDNFVKLLSGPSSG 0000000000000000000135689 >Absent in melanoma 1 prot; SWP:NA; PDB:2DADA GSSGSSGQIHLFSEPQFQGHSQSFEETTSQIDDSFSTKSCRVSGG 996421000000000000000000000000000000000000000 SWVVYDGENFTGNQYVLEEGHYPCLSAMGCPPGATFKSLRFISGP 000000000000000000000000000000000000000000113 SSG 467 >FLJ35834 protein; SWP:NA; PDB:2DAFA GSSGSSGQESVEDSLATVKVVLIPVGQEIVIPFKVDTILKYLKDH 987655543321100000000000000000000000000000000 FSHLLGIPHSVLQIRYSGKILKNNETLVQHGVKPQEIVQVEIFST 000000000000000000000000000000000000000000000 NPDLYPVRRIDGLTDVSQIITVSGPSSG 0000000000123456999999999999 >Ubiquilin-3; SWP:NA; PDB:2DAHA GSSGSSGHFQVQLEQLRSMGFLNREANLQALIATGGDVDAAVEKL 999853110000000000000000000000000000000000000 RQSSGPSSG 000123468 >KIAA0977 protein; SWP:Q53SF7; PDB:2DAJA GSSGSSGEKTVRVVINFKKTQKTIVRVSPHASLQELAPIICSKCE 998654210000000000000000000000000000000000000 FDPLHTLLLKDYQSQEPLDLTKSLNDLGLRELYAMDVNRESGPSS 000000000000110000000000000000000000013345778 G 9 >Ubiquitin carboxyl-termin; SWP:P45974; PDB:2DAKA GSSGSSGPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIF 986431000000000000000000000000000000000000000 SHIDDLDAEAAMSGPSSG 000124579999999999 >Protein KIAA0794; SWP:O94888; PDB:2DALA GSSGSSGGSAASSALKGLIQQFTTITGASESVGKHMLEACNNNLE 999999985420000000000000000000000000000000000 MAVTMFLDGGGSGPSSG 00000000125689999 >ETEA protein; SWP:NA; PDB:2DAMA GSSGSSGAPEERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHN 999999997532100000000000000000000000000000000 WNIEAAVQDRLNEQEGSGPSSG 0000000000001357999999 >WHSC1L1 protein, isoform; SWP:Q9BZ95; PDB:2DAQA GSSGSSGKLHYKQIVWVKLGNYRWWPAEICNPRSVPLNIQGLKHD 987643210000000000012210000000000000000000101 LGDFPVFFFGSHDYYWVHQGRVFPYVEGDKSFAEGQTSINKTFKK 100000000000000000000000000112221233433200000 ALEEAAKRFQELKASGPSSG 00000000000001136799 >Zinc finger MYM-type prot; SWP:Q9UJ78; PDB:2DASA GSSGSSGQPTAQQQLTKPAKITCANCKKPLQKGQTAYQRKGSAHL 999999999999986543100000000000011000000011000 FCSTTCLSSFSSGPSSG 00000000000236799 >Myosin-binding protein C,; SWP:Q00872; PDB:2DAVA GSSGSSGILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWF 876543210000000000000000000000000000000000000 KGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNY 000000000000000000000000000000000000000000000 RCEVTYKDKFDSCSFDLEVHESTGTTPNIDSGPSSG 000000010000000000000013468999999999 >RWD domain containing pro; SWP:Q9UIY3; PDB:2DAWA GSSGSSGMSASVKESLQLQLLEMEMLFSMFPNQGEVKLEDVNALT 987765421000000000000000000000001100000000000 NIKRYLEGTREALPPKIEFVITLQIEEPKVKIDLQVTMPHSYPYL 000000000010000000000000000000000000000000000 ALQLFGRSSELDRHQQLLLNKGLTSYIGTFDPGELCVCAAIQWLQ 000000000000000000000000000000000000000000000 DNSASYFLNRKLVSGPSSG 0000000123456789999 >Protein C21orf6; SWP:P57060; PDB:2DAXA GSSGSSGEQAEAQLAELDLLASMFPGENELIVNDQLAVAELKDCI 865432000000000000000000011000000000000000000 EKKTMEGRSSKVYFTINMNLDVSDEKMAMFSLACILPFKYPAVLP 000111110000000000000000000000000000000000000 EITVRSVLLSRSQQTQLNTDLTAFLQKHCHGDVCILNATEWVREH 000000000000000000000000000000000000000000000 ASGYVSRDTSSSGPSSG 00000124579999999 >InaD-like protein; SWP:Q8NI35; PDB:2DAZA GSSGSSGDAFTDQKIRQRYADLPGELHIIELEKDKNGLGLSLAGN 876532000000000000000000000000000000000000000 KDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQ 000000000000000000000000000000000000000000000 NASAIIKTAPSKVKLVFIRNEDAVNQMASGPSSG 0000000000000000000000000000001135 >heterogeneous nuclear rib; SWP:NA; PDB:2DB1A GSSGSSGMMLGPEGGEGYVVKLRGLPWSCSIEDVQNFLSDCTIHD 999986545665321000000000000000000000000000000 GVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYI 000000000000000000000000000000000000000000000 EVFKSHRTEMDWVLKHSGPNSASGPSSG 0000000000000000000123457899 >KIAA0890 protein; SWP:Q7L2E3; PDB:2DB2A GSSGSSGASRDLLKEFPQPKNLLNSVIGRALGISHAKDKLVYVHT 999986543100000000000000000000000000000000000 NGPKKKKVTLHIKWPKSVEVEGYGSKKIDAERQAAAAACQLFKGW 000000000000000000000000000000000000000000000 GLLGPRNELFDAAKYRVLADRFGSGPSSG 00000000000000000000001245689 >InaD-like protein; SWP:Q8NI35; PDB:2DB5A GSSGSSGLGNEDFNSVIQQMAQGRQIEYIDIERPSTGGLGFSVVA 987643211000000000000000000000000011100000000 LRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQN 000110000000000000000000110000000000000000000 ISHQQAIALLQQTTGSLRLIVAREPVHTKSSTSGPSSG 00000000000000000000000001345678999999 >SH3 and cysteine rich dom; SWP:Q96MF2; PDB:2DB6A GSSGSSGEPPKLVNDKPHKFKDHFFKKPKFCDVCARMIVLNNKFG 999999876543211000000000000000000000000100000 LRCKNCKTNIHEHCQSYVEMQRCSGPSSG 00000000000000000001000123579 >Tripartite motif protein; SWP:Q9C026; PDB:2DB8A GSSGSSGPVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYI 976431000000000000122221000000000000010000000 LELDDGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGV 000000000000000000000000000000000000000000000 SPYSKTLVLQTSEGSGPSSG 00000000000011234568 >Smooth muscle cell associ; SWP:NA; PDB:2DBAA GSSGSSGMTVSGPGTPEPRPATPGASSVEQLRKEGNELFKCGDYG 999999999999999999998542110000000000000000000 GALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASK 000000000000000000000000000000000000000000000 AIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVF 000000000000000000000000000000000000000000000 QEALRNISGPSSG 0000000013578 >unnamed protein product; SWP:Q78Y63; PDB:2DBCA GSSGSSGKFGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMC 998542000000000000000000000010000000000000000 LVVNQHLSVLARKFPETKFVKAIVNSCIEHYHDNCLPTIFVYKNG 000000000000000000000000111121111000000000000 QIEGKFIGIIECGGINLKLEELEWKLSEVGAIQSDLEENSGPSSG 000000000000000000000000000000000000124568999 >Myeloid cell nuclear diff; SWP:P41218; PDB:2DBGA GSSGSSGMVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTK 999986431000000000000000000000000000000000000 MQEEYNRIKITDLMEKKFQGVACLDKLIELAKDMPSLKNLVNNLR 000000000000000000000000000000000000000000000 KEKSKVASGPSSG 0000013568999 >golgi associated PDZ and; SWP:Q9HD26; PDB:2DC2A MKKSQGVGPIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPG --------0000000000000000000000000000000000000 QPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFE 000000000000000000000000000000000000000000000 VVYVALEHHHHHH 00001-------- >KIAA1915 protein; SWP:Q5VVJ2; PDB:2DCEA GSSGSSGHEEEELKPPEQEIEIDRNIIQEEEKQAIPEFFEGRQAK 999987654221000000000000000000000000000000000 TPERYLKIRNYILDQWEICKPKYLNKTSVRPGLKNCGDVNCIGRI 000000000000000000000000000000000111000000000 HTYLELIGAINFGCEQAVYNR 000000000000000000001 >Cytotoxic granule-associa; SWP:Q8CII5; PDB:2DGOA GSSGSSGQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 999987654210100000000000000000000000000000000 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 000000000000000000000000000000000000000000000 WATRKPPAPKSTYESNTKQSGPSSG 0012346899999999999999999 >Bruno-like 4, RNA binding; SWP:Q5R8W7; PDB:2DGPA GSSGSSGMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTV 987543211121000000000000000000000000000000000 LKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQV 000110010100000000000000000000000000000000000 KPADSESRGGSGPSSG 0001246799999999 >bruno-like 6, RNA binding; SWP:Q7TN33; PDB:2DGQA GSSGSSGVPMKDHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYEL 865543210000000000000000000000000000000000000 TVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPI 000000000000000000000000000000000000000000000 QVKPAASEGRGESGPSSG 000001345689999999 >RING finger and KH domain; SWP:Q86XN8; PDB:2DGRA GSSGSSGGQTTIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVT 988765200000000000000000000000000000000000000 PGRDKEPVFAVTGMPENVDRAREEIEAHITLRSGPSSG 00000000000000000000000000000001356899 >DAZ-associated protein 1; SWP:Q96EP5; PDB:2DGSA GSSGSSGSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYD 999986421000000000000000000000000000000000000 AEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 000000000000000000000000000000000000000002367 SKSSGPSSG 899999999 >RNA-binding protein 30; SWP:Q9BQ04; PDB:2DGTA GSSGSSGKASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIVKD 999975321000000000000000000000000000000000000 YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTASGPS 000000000000000000000000000000000012345688999 SG 99 >Heterogeneous nuclear rib; SWP:O60506; PDB:2DGUA GSSGSSGMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERVKKLK 987543221000000000000000000000000000000000000 DYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKER 000000000000000000000000000000000000012245899 KAQRQAASGPSSG 9999999999999 >Heterogeneous nuclear rib; SWP:P52272; PDB:2DGVA GSSGSSGACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENG 765432100000000000000000000000000000000000000 KSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNASGPS 000000000000000000000000000000000000000112467 SG 99 >Probable RNA-binding prot; SWP:Q9Y4C8; PDB:2DGWA GSSGSSGTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNA 999765431100000000000000000000000000000000012 HGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKSGPSS 211111000000000000000000000000000000000111234 G 6 >KIAA0430 protein; SWP:Q9Y4F3; PDB:2DGXA GSSGSSGNGADVQVSNIDYRLSRKELQQLLQEAFARHGKVKSVEL 999975310000000000000000000000000000000000000 SPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLATGA 000000000000000000000000000000000000000000123 SGPSSG 345678 >MGC11102 protein; SWP:Q9BSC1; PDB:2DGYA GSSGSSGEHIVPSNQQQIVRVLRTPGNNLHEVETAQGQRFLVSMP 999865310000000000000000000000000000000000000 SKYRKNIWIKRGDFLIVDPIEEGEKVKAEISFVLCKDHVRSLQKE 000000000000000000000000000000000000000000000 GFWPEAFSEVAEKHNSGPSSG 000000000001223568899 >DAZ-associated protein 1; SWP:NA; PDB:2DH8A GSSGSSGMNNSGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVD 999999997532110000000000000000000000000000000 CVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPK 000000000000000000000000000000000000000000000 PCTPRGMQPSGPSSG 000012356899999 >FLJ20171 protein; SWP:Q6NXG1; PDB:2DHAA GSSGSSGGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFFG 999998754200000000000000000000000000000000000 QHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKD 000000000000000000000000000000000000000000000 LLGKRYIELFRSTAAEVQQVLNRFSSASGPSSG 000000000000000000000000011245567 >tRNA selenocysteine assoc; SWP:Q5R462; PDB:2DHGA GSSGSSGPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD 988653210000000000000000000000000000000000000 QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 000000000000000000000000000000000000000000011 ASRVKPVESGPSSG 23456899999999 >Pleckstrin homology domai; SWP:Q9QZC7; PDB:2DHIA GSSGSSGFVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQTR 975311000000000000000000000000000000000000000 QSIEDKVHMPVDCINIRTGHECRDIQPPDGKPRDCLLQIVCRDGK 000000000000000000000011000000000000000000110 TISLCAESTDDCLAWKFTLQDSRTSGPSSG 000000000000000000000001235679 >TBC1 domain family member; SWP:Q9BYX2; PDB:2DHKA GSSGSSGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRT 998754210000000001222210000000000000000000000 AQDANPLDSIDLSSAVFDCKADAEEGIFEIKTPSRVITLKAATKQ 000000000000000000000000000000000000000000000 AMLYWLQQLQMKRWEFHNSPPAPSGPSSG 00000000000000000001346999999 >Protein bolA; SWP:P0ABE2; PDB:2DHMA GSSGSSGMMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESH 976543210000000000000000000000011234556654320 FKVVLVSDRFTGERFLNRHRMIYSTLAEELSTTVHALALHTYTIK 000000000011111100000000000000000000000000000 EWEGLQDTVFASPPCRG 00001123345678999 >CUE domain-containing pro; SWP:Q9NWM3; PDB:2DHYA GSSGSSGRPARQVRRLEFNQAMDDFKTMFPNMDYDIIECVLRANS 999999999999764320000000000000000000000000000 GAVDATIDQLLQMNLESGPSSG 0000000000000002458999 >Rap guanine nucleotide ex; SWP:Q5R9B2; PDB:2DHZA GSSGSSGDEIFCRVYMPDHSYVTIRSRLSASVQDILGSVTEKLQY 986532100000000000000000000000000000000000001 SEEPAGREDSLILVAVSSSGEKVLLQPTEDCVFTALGINSHLFAC 245655431100000000000000000000000000000000000 TRDSYEALVPLPEEIQVSPGDTEISGPSSG 000000000000011222345667778889 >Activating signal cointeg; SWP:Q9H1I8; PDB:2DI0A GSSGSSGMCGVELDSLISQVKDLLPDLGEGFILACLEYYHYDPEQ 999864211000000000000000000000000000000000000 VINNILEERLAPTLSQLDRNLDREMN 00000000000000000000000135 >BK158_1; SWP:Q6UW63; PDB:2DI7A GSSGSSGETGGERQLSPEKSEIWGPGLKADVVLPARYFYIQAVDT 999999976311000000000000001111111110000000000 SGNKFTSSPGEKVFQVKVSAPEEQFTRVGVQVLDRKDGSFIVRYR 000000000000000000000111100000000001100000000 MYASYKNLKVEIKFQGQHVAKSPYILKGSGPSSG 1111110000000000000000000012345689 >Filamin-B; SWP:O75369; PDB:2DI8A GSSGSSGIGDARRAKVYGRGLSEGRTFEMSDFIVDTRDAGYGGIS 999753100000000000000000000000000000000000000 LAVEGPSKVDIQTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVP 000000000000000000000000000000000000000000000 GSPFTVKISGEGRVKSGPSSG 000000000012245689999 >Filamin-B; SWP:O75369; PDB:2DI9A GSSGSSGDVTYDGHPVPGSPYTVEASLPPDPSKVKAHGPGLEGGL 999999999999999999876532210000000000000000000 VGKPAEFTIDTKGAGTGGLGLTVEGPCEAKIECSDNGDGTCSVSY 000000000000100000000000000000000000000000000 LPTKPGEYFVNILFEEVHIPGSPFKADIEMPFDPSSGPSSG 00000000000000000000000000000000123456799 >Filamin-B; SWP:O75369; PDB:2DIAA GSSGSSGPFDPSKVVASGPGLEHGKVGEAGLLSVDCSEAGPGALG 976432100000000000000000000000000000000000000 LEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGEL 000000000000000000110000000000000000000000000 VPHFPARVKVEPAVDTSSGPSSG 00000000000000234678899 >Filamin-B; SWP:O75369; PDB:2DIBA GSSGSSGHFPARVKVEPAVDTSRIKVFGPGIEGKDVFREATTDFT 999999998765432100000000000000000000000000000 VDSRPLTQVGGDHIKAHIANPSGASTECFVTDNADGTYQVEYTPF 000000000000000000000000000000000000000000000 EKGLHVVEVTYDDVPIPNSPFKVAVTEGCQPSSGPSSG 00000000000000000000000000001234567799 >Filamin-B; SWP:O75369; PDB:2DICA GSSGSSGGCQPSRVQAQGPGLKEAFTNKPNVFTVVTRGAGIGGLG 999864310000000000000000000000000000000010000 ITVEGPSESKINCRDNKDGSCSAEYIPFAPGDYDVNITYGGAHIP 000000000000000000000000000000000000000000000 GSPFRVPVKDVVDPS 000000000001234 >Tripartite motif protein; SWP:Q9HCM9; PDB:2DIDA GSSGSSGESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVV 877543210000000000000000000000000000000100000 PLSGPSSG 00135678 >Lamin-B receptor; SWP:Q14739; PDB:2DIGA GSSGSSGMPSRKFADGEVVRGRWPGSSLYYEVEILSHDSTSQLYT 999998643100000000000000000000000000000000000 VKYKDGTELELKENDIKSGPSSG 00000000000000000012457 >TFIIH basal transcription; SWP:P32780; PDB:2DIIA GSSGSSGFKRKANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAE 999877654321100000000000000000000000000000000 EFWANRLNVNSGPSSG 0000000234567789 >Tudor and KH domain-conta; SWP:Q9Y2W6; PDB:2DIQA GSSGSSGRSLQLDKLVNEMTQHYENSVPEDLTVHVGDIVAAPLPT 999753100000000000000000000000000000000000000 NGSWYRARVLGTLENGNLDLYFVDFGDNGDCPLKDLRALRSDFLS 000000000000000000000000000000000000000000000 LPFQAIECSLARIASGPSSG 00000001357999999999 >THUMP domain-containing p; SWP:Q9NXG2; PDB:2DIRA GSSGSSGKAFLEDMKKYAETFLEPWFKAPNKGTFQIVYKSRNNSH 976543100000000000000000000000000000000012211 VNREEVIRELAGIVCTLNSENKVDLTNPQYTVVVEIIKAVCCLSV 000000000000000000000000000000000000000000000 VKSGPSSG 00012356 >unnamed protein product; SWP:Q5RBZ7; PDB:2DISA GSSGSSGNCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASA 999853100000000000000000000000000000000001233 ADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAE 323332200000000000000000000000000000000000001 PEIDVDEDVMETVSGPSSG 2234677789999999999 >HIV TAT specific factor 1; SWP:Q5RB63; PDB:2DITA GSSGSSGGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRV 999999876442221000000000000000000000000000000 ECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFG 000000000000000000000000000000000000000000000 GRQITAQAWDGTTDYQSGPSSG 0000000000000000012357 >KIAA0430 protein; SWP:Q9Y4F3; PDB:2DIUA GSSGSSGCHTLLYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSIT 999975300000000000000000000000000000000000000 GCSAILRFINQDSAERAQKRMENEDVFGNRIIVSFTPKNRELCET 000000000000000000000000000000000000001234567 SGPSSG 899999 >TRNA selenocysteine assoc; SWP:NA; PDB:2DIVA GSSGSSGMAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRN 986542100000000000000000000000000000000000000 RLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNY 000000000000000000000000000000000000000000000 ATYSGPSSG 001247899 >Putative RNA-binding prot; SWP:Q80TJ3; PDB:2DIWA GSSGSSGDNMEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKA 998765421000000000000000000000000000000000000 IKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEK 000000000000000000000000000000000000000000000 DVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSE 000000000000000000000000000000000000000000000 IIQPLLDMAAGSGPSSG 00000000001245568 >Interferon-inducible doub; SWP:O75569; PDB:2DIXA GSSGSSGKTPIQVLHEYGMKTKNIPVYECERSDVQIHVPTFTFRV 998642000000000000000000000000000000000000000 TVGDITCTGEGTSKKLAKHRAAEAAINILKANASGPSSG 000000000000000000000000000000000013569 >Thioredoxin domain-contai; SWP:Q8NBS9; PDB:2DIZA GSSGSSGTVLALTENNFDDTIAEGITFIKFYAPWCGHCKTLAPTW 754211000000000000000000000000000000000000000 EELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLLFRGG 000000000000000000000000000000000000000000000 KKVSEHSGGRDLDSLHRFVLSQAKDEL 000000010000000000000000124 >Thioredoxin-related trans; SWP:Q561W0; PDB:2DJ0A GSSGSSGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFA 654321000000000000000000000000000000000000000 PIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQLPT 000000000001110000000000000000000000001000000 LILFQGGKEAMRRPQIDKKGRAVSWTFSEENVIREFNLNELSGPS 000000000000000001100000000000000000000000123 SG 56 >Protein disulfide-isomera; SWP:P08003; PDB:2DJ1A GSSGSSGDDDLEVKEENGVWVLNDGNFDNFVADKDTVLLEFYAPW 998764322100000000000000000000000000000000000 CGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVS 000000000000000000000000000000000000000000000 GYPTIKILKKGQAVDYDGSRTQEEIVAKVREVSQPDWTPPPEVTS 000000000000000000000000000000000000000011234 GPSSG 66789 >Protein disulfide-isomera; SWP:P08003; PDB:2DJ2A GSSGSSGVTLSLTKDNFDDVVNNADIILVEFYAPWCGHCKKLAPE 765431000000000000000000000000000000000000000 YEKAAKELSKRSPPIPLAKVDATEQTDLAKRFDVSGYPTLKIFRK 000000000000000000000000000000000000000000000 GRPFDYNGPREKYGIVDYMIEQSGSGPSSG 000000000000000000000000124689 >Protein disulfide-isomera; SWP:P08003; PDB:2DJ3A GSSGSSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEP 655331000000000000000000000000000000000000000 IYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTIYFAPS 000000000000000000000000000000000000000000000 GDKKNPIKFEGGNRDLEHLSKFIDEHATKRSRTKEELSGPSSG 0000000000100000000000000001235799999999999 >Filamin-B; SWP:O75369; PDB:2DJ4A GSSGSSGVVDPSKVKIAGPGLGSGVRARVLQSFTVDSSKAGLAPL 865432100000000000000000000000000000000000000 EVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADE 000000000000000000000000000000000000000000000 EIPRSPFKVKVLPTYDAS 000000000000000123 >Protein disulfide-isomera; SWP:NA; PDB:2DJJA GPLGSEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAP 998642000000000000000000000000000000000000000 KYEELGALYAKSEFKDRVVIAKVDATANDVPDEIQGFPTIKLYPA 000000000000000000000000000000000010000000000 GAKGQPVTYSGSRTVEDLIKFIAENGKYKAA 0000000000000000000000000000000 >Protein disulfide-isomera; SWP:NA; PDB:2DJKA GPLGSPLIGEIGPETYSDYMSAGIPLAYIFAETAEERKELSDKLK 999743100000000000000000000000000000000000000 PIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQEVAKN 000000000000000000000000000000000000000000000 QKFPFDQEKEITFEAIKAFVDDFVAGKIEPSIKSEPIPEKQEG 0000000000000000000000000000001113589999999 >Homeobox protein DLX-5; SWP:NA; PDB:2DJNA GSSGSSGRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLG 999987653210000000000000000000000000000000000 LTQTQVKIWFQNKRSKIKKSGPSSG 0000000000000000123579999 >Hypothetical protein SB14; SWP:NA; PDB:2DJPA GSSGSSGCSPVRERRLEHQLEPGDTLAGLALKYGVTMEQIKRANR 999999975431100000000000000000000000000000000 LYTNDSIFLKKTLYIPILTEPRDLFNSGPSSG 00000000000000000001224578999999 >SH3 domain containing rin; SWP:NA; PDB:2DJQA GSSGSSGPRAKALCNYRGKNPGDLKFNKGDVILLRRQLDENWYQG 976532000000000000000000000000000000000000000 EINGVSGIFPASSVEVISGPSSG 00000000000000000013468 >Zinc finger BED domain-co; SWP:NA; PDB:2DJRA GSSGSSGSEAWEYFHLAPARAGHHPNQYATCRLCGRQVSRGPGVN 864321000000000000122211100000000000000012211 VGTTALWKHLKSMHREELEKSGHGQSGPSSG 1000000000000000000001111123455 >Ephrin type-B receptor 1; SWP:NA; PDB:2DJSA GSSGSSGPSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRY 654321000000000000000000000000000000000000000 YEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAGYGK 000000000000000000000000000000000000000000000 FSGKMCFQTLTDSGPSSG 000000000000123456 >unnamed protein product; SWP:NA; PDB:2DJTA GSSGSSGQASGHFSVELVRGYAGFGLTLGGGRDVAGDTPLAVRGL 999876543200000000001100000000000010000000000 LKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGPQL 000000000000000000000000000000000000000000000 HLVIRRPLSGPSSG 00000001224579 >Receptor-type tyrosine-pr; SWP:NA; PDB:2DJUA GSSGSSGPKPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRA 543321000000000000000000000000000000000000000 AGTEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPS 001110000000000000000000000000000000000000000 EAVRARTGEQSGPSSG 0000000001112356 >Methionyl-tRNA synthetase; SWP:NA; PDB:2DJVA GSSGSSGTTAKPQQIQALMDEVTKQGNIVRELKAQKADKNEVAAE 876644321000000000000000000000000000000000000 VAKLLDLKKQLAVAEGKPPEAPKGKKKKSGPSSG 0000000000000000012234678999999999 >Heterogeneous nuclear rib; SWP:NA; PDB:2DK2A GSSGSSGDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERV 987543211100110000000000000000000000000000000 KKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKK 000000000000000000000000000000000000000011235 RSGPSSG 6899999 >E3 ubiquitin-protein liga; SWP:NA; PDB:2DK3A GSSGSSGVRSQVLKYMVPGARVIRGLDWKWRDQDGSPQGEGTVTG 998654310000000000000000000000100111110000000 ELHNGWIDVTWDAGGSNSYRMGAEGKFDLKLAPGYSGPSSG 00000000000001000000000000000000000101134 >DNA-directed RNA polymera; SWP:NA; PDB:2DK5A GSSGSSGDSQNAGKMKGSDNQEKLVYQIIEDAGNKGIWSRDVRYK 999999999876543332100000000000000000000000000 SNLPLTEINKILKNLESKKLIKAVKSVAASKKKVYMLYNLSGPSS 000000000000000000000000001121000000000011235 G 7 >DNA-directed RNA polymera; SWP:NA; PDB:2DK8A GSSGSSGPDADPVEIENRIIELCHQFPHGITDQVIQNEMPHIEAQ 999976421000000000000000000000000000000000000 QRAVAINRLLSMGQLDLLRSNTGLLYRIKDSGPSSG 000000000000000000001100000001246899 >NEDD9-interacting protein; SWP:NA; PDB:2DK9A MGHHHHHHMGSAGTQEELLRWCQEQTAGYPGVHVSDLSSSWADGL 999997532111000000000000000000000000000000000 ALCALVYRLQPGLLEPSELQGLGALEATAWALKVAENELGITPVV 000000000000000000000000000000000000000000000 SAQAVVAGSDPLGLIAYLSHFHSAFKSM 0000000000000000000000000011 >Collagen alpha-1(XX) chai; SWP:NA; PDB:2DKMA GSSGSSGPLPPPRALTLAAVTPRTVHLTWQPSAGATHYLVRCSPA 999865210000000000000000000000000000000000000 SPKGEEEEREVQVGRPEVLLDGLEPGRDYEVSVQSLRGPEGSEAR 011222100000000000000000000000000000000000000 GIRARTPTSGPSSG 00000000013469 >Pleckstrin homology domai; SWP:NA; PDB:2DKPA GSSGSSGKRSNSIKRNPNAPVVRRGWLYKQDSTGMKLWKKRWFVL 999998754211000000000000000000111110000000000 SDLCLFYYRDEKEEGILGSILLPSFQIALLTSEDHINRKYAFKAA 000000000000000000000000000000010110110000000 HPNMRTYYFCTDTGKEMELWMKAMLDAALVQTSGPSSG 00000000000000000000000000000001234579 >KIAA1075 protein; SWP:NA; PDB:2DKQA GSSGSSGMSTAADLLRQGAACSVLYLTSVETESLTGPQAVARASS 999987643211000000000000000000000000000000000 AALSCSPRPTPAVVHFKVSAQGITLTDNQRKLFFRRHYPVNSITF 000000000000000000000000000000000100000000000 SSTDPQDRRWTNPDGTTSKIFGFVAKKPGSPWENVCHLFAELDPD 000000000000111000000000000100000000000000000 QPAGAIVTFITKVLLGQRKSGPSSG 0000000000000001357999999 >LIN-7 homolog B; SWP:NA; PDB:2DKRA GSSGSSGVVELPKTDEGLGFNIMGGKEQNSPIYISRVIPGGVADR 653211000000000000000000001110000000000000000 HGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVKLVVRSGP 000000000000000000000000000000000000000000013 SSG 468 >RING finger and CHY zinc; SWP:NA; PDB:2DKTA GSSGSSGGVRNLAQGPRGCEHYDRACLLKAPCCDKLYTCRLCHDT 999999998776532100000000000000000000000000000 NEDHQLDRFKVKEVQCINCEKLQHAQQTCEDCSTLFGEYYCSICH 000000000000000000000000000000000000000000000 LFDKDKRQYHCESCGICRIGPKEDFFHCLKCNLCLTTNLRGKHKC 000000000000000000000000000000000000000111111 IESGPSSG 12346899 >KIAA1556 protein; SWP:NA; PDB:2DKUA GSSGSSGANCFTEELTNLQVEEKGTAVFTCKTEHPAATVTWRKGL 987543100000000000000000000000000000000000000 LELRASGKHQPSQEGLTLRLTISALEKADSDTYTCDIGQAQSRAQ 000000000000001000000000000000000000000000000 LLVQGRRSGPSSG 0000001246899 >hypothetical protein KIAA; SWP:NA; PDB:2DKWA GSSGSSGNTLRELRLFLRDVTKRLATDKRFNIFSKPVSDYLEVIK 976321000000000000000000000000000000011111100 EPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYNPDKDPGD 000000000000000000000000000000000000111221110 KIIRHRACTLKDTAHAIIAAELDPEFNKLCEEIKESGPSSG 00000000000000000000000000000000001124689 >SAM pointed domain-contai; SWP:NA; PDB:2DKXA GSSGSSGLKDIETACKLLNITADPMDWSPSNVQKWLLWTEHQYRL 764321000000000000000000000000000000000000000 PPMGKAFQELAGKELCAMSEEQFRQRSPLGGDVLHAHLDIWKSAA 000000000000000000000000000000000000000000000 SGPSSG 002356 >hypothetical protein LOC6; SWP:NA; PDB:2DKZA GSSGSSGPWQPPADLSGLSIEEVSKSLRFIGLSEDVISFFVTEKI 999864210000010000000000000000000000000000000 DGNLLVQLTEEILSEDFKLSKLQVKKIMQFINGSGPSSG 000000000000000000000000000000000124578 >SAM and SH3 domain-contai; SWP:NA; PDB:2DL0A GSSGSSGGGLTEICRKPVSPGCISSVSDWLISIGLPMYAGTLSTA 999999999999999976421000000000000000000000000 GFSTLSQVPSLSHTCLQEAGITEERHIRKLLSAARLFKLPPGPEA 000000000000000000000000000000000000000011345 MSGPSSG 6899999 >Spartin; SWP:NA; PDB:2DL1A GSSGSSGEPAEIKIIREAYKKAFLFVNKGLNTDELGQKEEAKNYY 999753211000000000000000000000000000000000000 KQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTR 000000000000011122221110000000000000000000000 LEILEKGLATSLQNDLQEVPSGPSSG 00000011357999999999999999 >Sorbin and SH3 domain-con; SWP:NA; PDB:2DL3A GSSGSSGRPARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYEG 655431000000000000000000000000000000000000000 EHHGRVGIFPRTYIELLSGPSSG 00000000000000000124579 >Protein Stac; SWP:NA; PDB:2DL4A GSSGSSGNTYVALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKG 765432000000000000000000000000000000000000000 KIQDRIGFFPANFVQRLSGPSSG 00000000000000000124689 >KIAA0769 protein; SWP:NA; PDB:2DL5A GSSGSSGTLRNYPLTCKVVYSYKASQPDELTIEEHEVLEVIEDGD 999987532000000000000000000000000000000000000 MEDWVKARNKVGQVGYVPEKYLQFPTSSGPSSG 010000000000000000000000012578899 >Chromodomain-helicase-DNA; SWP:NA; PDB:2DL6A GSSGSSGEPNHLDVDLETRIPVINKVDGTLLVGEDAPRRAELEMW 999999997532110000000000000000000000000000000 LQGHPEFAVDPRFLAYMEDRRKQKWQRCKKNNSGPSSG 00000000000000000000011245678999999999 >KIAA0769 protein; SWP:NA; PDB:2DL7A GSSGSSGVCFVKALYDYEGQTDDELSFPEGAIIRILNKENQDDDG 986532100000000000000000000000000000001122210 FWEGEFNGRIGVFPSVLVEELSSGPSSG 0000000000000000000001246799 >SLIT-ROBO Rho GTPase-acti; SWP:NA; PDB:2DL8A GSSGSSGEPIEAIAKFDYVGRTARELSFKKGASLLLYQRASDDWW 876432100000000000000000000000000000000000000 EGRHNGIDGLIPHQYIVVQDTSGPSSG 000000000000000000012456789 >Leucine-rich repeat-conta; SWP:NA; PDB:2DL9A GSSGSSGPFIMDAPRDLNISEGRMAELKCRTPPMSSVKWLLPNGT 997642100000000000000000000000000000000000000 VLSHASRHPRISVLNDGTLNFSHVLLSDTGVYTCMVTNVAGNSNA 000000000000000000000000000000000000000000000 SAYLNVSSGPSSG 0000000011357 >Receptor-type tyrosine-pr; SWP:NA; PDB:2DLEA GSSGSSGAIQVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHV 965442100000000000000000000000012211100000000 AGETDSSNLNVSEPRAVIPGLRSSTFYNITVCPVLGDIEGTPGFL 000100000000000000000000000000000000000000000 QVHTPPVPSGPSSG 00000001235799 >Filamin-B; SWP:NA; PDB:2DLGA GSSGSSGRAPSVATVGSICDLNLKIPEINSSDMSAHVTSPSGRVT 887777643110000000000000000000000000000000000 EAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQFTVG 000000001000000000000000000000000000000000000 PLGEGGSGPSSG 001234678999 >Receptor-type tyrosine-pr; SWP:NA; PDB:2DLHA GSSGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEP 999999999864210000000000000000000000000000000 NGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYS 000000000000000001000000000000000000000000000 VKVLAFTSIGDGPLSSDIQVITQTGSGPSSG 0000000000000000000000002468999 >novel protein; SWP:NA; PDB:2DLKA GSSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPA 999998756688999976455453234334555676655679999 CGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG 9976455454233223455678999999999999 >Interferon regulatory fac; SWP:NA; PDB:2DLLA GSSGSSGKLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQ 998654200000000000000000000000000000000012222 DYNREEDAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKSN 221100000000000000111111110000000000000000000 DFEELVERSQLDISDPYKVYRIVPESGPSSG 0000000000000000000000000236679 >Vinexin; SWP:NA; PDB:2DLMA GSSGSSGKAARLKFDFQAQSPKELTLQKGDIVYIHKEVDKNWLEG 998754310000000000000000000000000000000000000 EHHGRLGIFPANYVEVLSGPSSG 00010000000000001236799 >Thyroid receptor-interact; SWP:NA; PDB:2DLOA GSSGSSGEGCYVATLEKCATCSQPILDRILRAMGKAYHPGCFTCV 999766544211110000000000000000000000000000000 VCHRGLDGIPFTVDATSQIHCIEDFHRKFASGPSSG 000000000000000000000000000001236799 >KIAA1783 protein; SWP:NA; PDB:2DLPA GSSGSSGSGYVIALRSYITDNCSLLSFHRGDLIKLLPVATLEPGW 998754210000000000000000000000000000000000100 QFGSAGGRSGLFPADIVQPAAAPDFSFSKEQRSGSGPSSG 0000010000000000000000123579999999999999 >GLI-Kruppel family member; SWP:NA; PDB:2DLQA GSSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCY 999999999999999999999999999999999887667655578 FRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHT 999999999999876777777899999999655545666999999 GEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPSSG 9976557999975456786699999999999999 >Rho guanine nucleotide ex; SWP:NA; PDB:2DLSA GSSGSSGVQRCVIIQKDQHGFGFTVSGDRIVLVQSVRPGGAAMKA 998642100000000011100000000100000000000000000 GVKEGDRIIKVNGTMVTNSSHLEVVKLIKSGAYVALTLLGSSSGP 000000000000000000000000000001000000000124578 SSG 899 >Myosin binding protein C,; SWP:NA; PDB:2DLTA GSSGSSGQLEVLQDIADLTVKAAEQAVFKCEVSDEKVTGKWYKNG 876542100000000000000000000000000000000000000 VEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGYALSLS 000000000000000000000000000000000000000000000 AKLNFLEIKVSGPSSG 0000000012345689 >InaD-like protein; SWP:NA; PDB:2DLUA GSSGSSGPETVCWGHVEEVELINDGSGLGFGIVGGKTSGVVVRTI 999997653210000000000000010000000001110000000 VPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSV 000000000000000000000000000000000000000000000 RMLVARDPAGDISVTSGPSSG 000000001234566899999 >Docking protein 2, isofor; SWP:NA; PDB:2DLWA GSSGSSGHKEFAVTMRPTEASERCHLRGSYTLRAGESALELWGGP 998765320000000000000000000000000000000000112 EPGTQLYDWPYRFLRRFGRDKVTFSFEAGRRCVSGEGNFEFETRQ 110000000000000000011000000001100000000000000 GNEIFLALEEAISAQKNSGPSSG 00000000000000012458999 >UBX domain-containing pro; SWP:NA; PDB:2DLXA GSSGSSGIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWL 999999999999999998864322111110000000000000000 MINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEG 000000011100000000000000000000000000000000000 QRYIQFYKLGDFPYVSILDPRTGQKLVEWHQLDVSSFLDQVTGFL 000000000000000000000000000000000000000000000 GEHGQLDGLSSSSGPSSG 000001245899999999 >Fyn-related kinase; SWP:NA; PDB:2DLYA GSSGSSGAEDRSLQAEPWFFGAIKRADAEKQLLYSENQTGAFLIR 987655431100000000000000000000000000000000000 ESESQKGDFSLSVLDEGVVKHYRIRRLDEGGFFLTRRKVFSTLNE 000010000000000000000000000000000000000000000 FVNYYTTTSDGLCVKLEKPCLKIQVSGPSSG 0000000000000000000000012357999 >Tyrosine-protein kinase T; SWP:NA; PDB:2DM0A GSSGSSGNKITNLEIYEWYHRNITRNQAEHLLRQESKEGAFIVRD 999999643100000000000000000000000000000000000 SRHLGSYTISVFMGARRSTEAAIKHYQIKKNDSGQWYVAERHAFQ 000000000000001133310000000000000000000000000 SIPELIWYHQHNAAGLMTRLRYPVGLMGSSGPSSG 00000000000001111000000000112468999 >Sortilin-related receptor; SWP:NA; PDB:2DM4A GSSGSSGPDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIV 765321000000000000000000000000000000000000000 EYSRSGSKMWASQRAASNFTEIKNLLVNTLYTVRVAAVTSRGIGN 000000000000000000000000000000000000000000000 WSDSKSITTIKGSGPSSG 000000000000124579 >KIAA1556 protein; SWP:NA; PDB:2DM7A GSSGSSGPARFTQDLKTKEASEGATATLQCELSKVAPVEWKKGPE 976432100000000000000000000000000000000000000 TLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCGQERTSATL 000001000000010000000000000000000000000000000 TVRALPARFTEGSGPSSG 000000023567899999 >InaD-like protein; SWP:NA; PDB:2DM8A GSSGSSGPATCPIVPGQEMIIEISKGRSGLGLSIVGGKDTPLNAI 875432111110000000000000001100000000000001000 VIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQ 000000000000000000000000000000000000000000000 TPQKVRLVVYRDEAHYRDEESGPSSG 00000000000000113457899999 >Filamin-B; SWP:NA; PDB:2DMBA GSSGSSGTGDASKCLATGPGIASTVKTGEEVGFVVDAKTAGKGKV 999864310000000000000000000000000000000000000 TCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGV 000000000000000000000000000000000000000000000 DIPNSPFTVMATDGEVTAVEEAPVNACPSGPSSG 0000000000000122345689999999999999 >Filamin-B; SWP:NA; PDB:2DMCA GSSGSSGIPGSPFTAKITDDSRRCSQVKLGSAADFLLDISETDLS 999999999999999998754311000000000000000000000 SLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKN 000000000000000000000000000000000000000000000 GNHVANSPVSIMVVQSEIGDSGPSSG 00000000000000001246899999 >Zinc finger protein 64, i; SWP:NA; PDB:2DMDA GSSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYA 999999999999999999987655544344445656556897754 AADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGD 477776455334555555645578765435555434445677999 SGPSSG 999999 >PHD finger protein 3; SWP:NA; PDB:2DMEA GSSGSSGSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAKVAT 999865210000000000000000000000000000000000000 KIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEV 000000000000000000000000000000000000000000000 TPDHLIRMSPEELASKELAAWRRRSGPSSG 000000000000001111111134679999 >RING finger protein 25; SWP:NA; PDB:2DMFA GSSGSSGEEDWVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYIT 999865421000000000000000000000001232100000000 LHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNPRGLSDEQ 000012333221000000000000000000000000000000000 IHTILQVLGHVAKAGLGTAMLYELIEKGKEILTDNNIPHGQSGPS 000000000000000000000000000000000000112346899 SG 99 >KIAA1228 protein; SWP:NA; PDB:2DMGA GSSGSSGSPLGQIQLTIRHSSQRNKLIVVVHACRNLIAFSEDGSD 998642100000000000000000000000000000000000000 PYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQR 000000000000111000000000000000000000000000000 RTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTE 000000000013454321000000000000000000000000000 DSGPSSG 0135689 >Myoferlin; SWP:NA; PDB:2DMHA GSSGSSGMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKV 642100000000000000000001000000000000000000000 DNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQNKLIGT 000000000000000000000000000000000000111100000 ATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPPS 000000000000000000000000000000000000000000000 GPSSG 13578 >Teashirt homolog 3; SWP:NA; PDB:2DMIA GSSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHY 999999999999999999998899999999999866766899877 RDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSF 899999999999999999999999999999999999999999999 ESLQDLSVHMIKTKHYQKVSGPSSG 9999988889999999999999999 >midline 2 isoform 2; SWP:NA; PDB:2DMKA GSSGSSGEGLDYLTAPNPPSIREELCTASHDTITVHWISDDEFSI 999998764321000000000000000000000000000000000 SSYELQYTIFTGQANFISLYNSVDSWMIVPNIKQNHYTVHGLQSG 000000000001110000000000000000000000000000000 TRYIFIVKAINQAGSRNSEPTRLKTNSQPFKSGPSSG 0000000000000000000000000001123578999 >Protein disulfide-isomera; SWP:NA; PDB:2DMLA GSSGSSGAVSGLYSSSDDVIELTPSNFNREVIQSDGLWLVEFYAP 998655432200000000000000000000000000000000000 WCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGF 000000000000000000000000000000000000000000000 PTIKIFGANKNKPEDYQGGRTGEAIVDAALSALRSGPSSG 0000000000000000000000000000000000012468 >Protein disulfide-isomera; SWP:P30101; PDB:2DMMA GSSGSSGFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNEN 999765332111000000000000000000000000000000000 KDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN 000000000000000000000000000000000000000000000 DVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREA 000000000000000000000000000000000000000000000 TSGPSSG 0001134 >Homeobox protein TGIF2LX; SWP:Q8IUE1; PDB:2DMNA GSSGSSGKKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSE 999999765321000000000000000000000000000000000 KTNLSLLQISNWFINARRRILPDMLQQRRNDPSGPSSG 00000000000000000000000001357999999999 >Neutrophil cytosol factor; SWP:P19878; PDB:2DMOA GSSGSSGEAHRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWATV 987542000000111110000000000000000000001000000 MFNGQKGLVPCNYLEPVSGPSSG 00000000000000000135799 >Zinc fingers and homeobox; SWP:Q9Y6X8; PDB:2DMPA GSSGSSGAYPDFAPQKFKEKTQGQVKILEDSFLKSSFPTQAELDR 999999999999999642100000000000000000000000000 LRVETKLSRREIDSWFSERRKLRDSMEQAVLDSMGSGKSGPSSG 00000000000000000000000113568999999999999999 >LIM/homeobox protein Lhx9; SWP:Q9NQ69; PDB:2DMQA GSSGSSGKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTG 999998754321100000000000000000000000000000000 LTKRVLQVWFQNARAKFRRNLLRQENGGVSGPSSG 00000000000000000001112346899999999 >Homeobox protein OTX2; SWP:P80206; PDB:2DMSA GSSGSSGRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKIN 999999986542100000000000000000000000000000000 LPESRVQVWFKNRRAKCRQQQQQQQNGGQSGPSSG 00000000000000000111357999999999999 >Homeobox protein goosecoi; SWP:P56915; PDB:2DMUA GSSGSSGRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVH 999999987643000000000000000000000000000000000 LREEKVEVWFKNRRAKWRRSGPSSG 0000000000000000000124689 >Itchy homolog E3 ubiquiti; SWP:Q96J02; PDB:2DMVA GSSGSSGLPPGWEQRVDQHGRVYYVDHVEKRTTWDRPSGPSSG 8654310000000000000000000000000000000136899 >synaptobrevin-like 1 vari; SWP:NA; PDB:2DMWA GSSGSSGMAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPS 999864210000000001000000000000000000000000000 ENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIK 000000000000000000000000000000000000000000000 KRFQTTYGSRAQTAPPYAMNSEFSSVLAAQLKHHSSGPSSG 00000000000000010000000000000000000112468 >DnaJ homolog subfamily B; SWP:Q8NHS0; PDB:2DMXA GSSGSSGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDN 999764210000000000000000000000000000000000000 KEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAGGGASGPS 000000000000000000000000000000134689999999999 SG 99 >Spermatid perinuclear RNA; SWP:Q96SI9; PDB:2DMYA GSSGSSGRKILDSKAIDLMNALMRLNQIRPGLQYKLLSQSGPVHA 999999999887542100000000000000000000000000000 PVFTMSVDVDGTTYEASGPSKKTAKLHVAVKVLQAMGYPTGFDAD 000000000000000000000000000000000000000012245 ISGPSSG 7999999 >InaD-like protein; SWP:Q8NI35; PDB:2DMZA GSSGSSGGSDSSLFETYNVELVRKDGQSLGIRIVGYVGTSHTGEA 998765432110000000000000000000000000001343210 SGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEV 000000000000000000000000000000000000000000000 LRNAGQVVHLTLVRRKTSSSTSPLEPPSDRGTVSGPSSG 000000000000000013589999999999999999999 >Zinc fingers and homeobox; SWP:Q9H4I2; PDB:2DN0A GSSGSSGASIYKNKKSHEQLSALKGSFCRNQFPGQSEVEHLTKVT 999999999765321100000000000000000000000000000 GLSTREVRKWFSDRRYHCRNLKGSRSGPSSG 0000000000000000011224567999999 >General transcription fac; SWP:P78347; PDB:2DN4A GSSGSSGLRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLY 876421000000000000000000000000000000000000000 VEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLNSTR 000000000000000000000000000000000000000001355 EDLSGPSSG 679999999 >General transcription fac; SWP:Q9UHL9; PDB:2DN5A GSSGSSGLREQVKELFNEKYGEALGLNRPVLVPYKLIRDSPDAVE 975320000000000000000000000000000000000000000 VTGLPDDIPFRNPNTYDIHRLEKILKAREHVRMVIINQSGPSSG 00000000000000000000000000000000000001233445 >KIAA0640 protein; SWP:Q9UH65; PDB:2DN6A GSSGSSGVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSEDLK 766432000000000000222100000000000000000000000 DKKGDILLDENCCVESLPDKDGKKCLFLVKCFDKTFEISASDKKK 000000000000000000000001000000000000000000000 KQEWIQAIHSTIHLLKLGSSGPSSG 0000000000000000013467899 >Receptor-type tyrosine-pr; SWP:P10586; PDB:2DN7A GSSGSSGPGRPTMMISTTAMNTALLQWHPPKELPGELLGYRLQYC 754321000000000000000000000000000000000000000 RADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNRAGLGEE 000000000000000000000000000000000000000000000 FEKEIRTPEDLSGPSSG 00000000012357799 >acetyl-CoA carboxylase 2; SWP:O00763; PDB:2DN8A GSSGSSGTCVFEKENDPTVLRSPSAGKLTQYTVEDGGHVEAGSSY 999999999976432110000000000000000000000000000 AEMEVMKMIMTLNVQERGRVKYIKRPGAVLEAGCVVARLELDDPS 000000000000000000000000000000000000000000112 KVHPSGPSSG 4679999999 >DnaJ homolog subfamily A; SWP:Q96EY1; PDB:2DN9A GSSGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPK 866542000000000000000000000000000000000011000 AKEKFSQLAEAYEVLSDEVKRKQYDAYGSGPSSG 0000000000000000000000000011246689 >unnamed protein product; SWP:Q14DR8; PDB:2DNAA GSSGSSGPSHSLQAPEVRFSKEMECLQAMGFVNYNANLQALIATD 999999997531000000000000000000000000000000000 GDTNAAIYKLKSSQGFSGPSSG 0000000000000135679999 >Pyruvate dehydrogenase pr; SWP:O00330; PDB:2DNCA GSSGSSGIKILMPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIE 764321000000000000000000000000000000000000000 TDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVEEGEDWK 000000000000000000000000000000000000000000000 HVSGPSSG 13468999 >Dihydrolipoyllysine-resid; SWP:P10515; PDB:2DNEA GSSGSSGQKVPLPSLSPTMQAGTIARWEKKEGDKINEGDLIAEVE 653210000000000000000000000000000000000000000 TDKATVGFESLEECYMAKILVAEGTRDVPIGAIICITVGKPEDIE 000000000000000000000000000000000000000000000 AFKNYTLDSSAASGPSSG 000000013467999999 >Doublecortin domain-conta; SWP:Q9UHG0; PDB:2DNFA GSSGSSGRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWDHV 999999975320000000000000000000000000000000000 LQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDK 000000000000000000000000000000000000000000000 FKKLPYGELLFDSGPSSG 000000000001245789 >Eukaryotic translation in; SWP:Q9WUK2; PDB:2DNGA GSSGSSGKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLSIRSVR 876543210000000000000000000000000000000000000 LVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDRSLRVDIA 000011100000000000000000000000000000000000000 EGRKQDKSGPSSG 1124568999999 >Bruno-like 5, RNA binding; SWP:Q86VW6; PDB:2DNHA GSSGSSGSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDEC 999999988765321000000000000000000000000000000 TVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLV 000001100000000000000000000000000000000000000 VKFADTDKESGPSSG 000012346778999 >Bruno-like 4, RNA binding; SWP:Q9BQ96; PDB:2DNKA GSSGSSGCLRQPPSHRKLFVGMLNKQQSEDDVRRLFEAFGNIEEC 999999999875432000000000000000000000000000000 TILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLV 000011110000000000000000000000000000000000000 VKFADTDKESGPSSG 000012468999999 >cytoplasmic polyadenylati; SWP:Q5T390; PDB:2DNLA GSSGSSGSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAES 998642100000000000000000000000000000000010111 KSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKD 111000000000000000000000000000000000000000000 KPVQIRPWNLSDSDFVMDSGPSSG 000000001234678899999999 >SRp46 splicing factor; SWP:Q6PF01; PDB:2DNMA GSSGSSGPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYI 877665443221100000000000000000000000000000000 PREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVA 011121110000000000000000000000000000000000001 RYGRRDLSGPSSG 2345678999999 >RNA-binding protein 12; SWP:Q9NTZ6; PDB:2DNNA GSSGSSGKPLPINPDDLYVSVHGMPFSAMENDVRDFFHGLRVDAV 999877653210000000000000000000000000000000000 HLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPA 000001110000000000000000000000000000000000000 TERQWVAAGGHITSGPSSG 000000000011345689- >trinucleotide repeat cont; SWP:Q5SZQ7; PDB:2DNOA GSSGSSGSRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVL 999987654310000000000000000000000000000000000 RGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKF 001100000000000000000000000000000000000000000 ADTEKESGPSSG 012346799999 >RNA-binding protein 14; SWP:Q96PK6; PDB:2DNPA GSSGSSGNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDY 999875310000000000000000000000000000000000000 AFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTKGQKKSGPSSG 000000000000000000000000000000000112334567899 >RNA-binding protein 4B; SWP:NA; PDB:2DNQA GSSGSSGMVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKNYG 998542000000000000000000000000000000000000000 FVHIEDKTAAEDAIRNLHHYKLHGVNINVEASKNKSKASSGPSSG 000000000000000000000000000000001245799999999 >Synaptojanin-1; SWP:O43426; PDB:2DNRA GSSGSSGGTVLVSIKSSLPENNFFDDALIDELLQQFASFGEVILI 754322100000000010110000000000000000000000000 RFVEDKMWVTFLEGSSALNVLSLNGKELLNRTITIALKSPSGPSS 000000000000000000000000000000000000001245789 G 9 >Chromodomain protein, Y c; SWP:NA; PDB:2DNTA GSSGSSGMASEELYEVERIVDKRKNKKGKTEYLVRWKGYDSEDDT 999877665542100000000000000000000000000000000 WEPEQHLVNCEEYIHDFNRRHTEKQKESGPSSG 000000000000000000000112457999999 >SH3 multiple domains 1; SWP:Q5TCZ1; PDB:2DNUA GSSGSSGEEKYVTVQPYTSQSKDEIGFEKGVTVEVIRKNLEGWWY 976431100000000000000000000000000000000010000 IRYLGKEGWAPASYLKKAKDSGPSSG 00000000000000000012467799 >Chromobox protein homolog; SWP:Q9QXV1; PDB:2DNVA GSSGSSGERVFAAEALLKRRIRKGRMEYLVKWKGWSQKYSTWEPE 999986532100000000000111000000000123321000000 ENILDARLLAAFESGPSSG 0000000000000135689 >Acyl carrier protein; SWP:O14561; PDB:2DNWA GSSGSSGMPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDL 987654322110000000000000000000000000000000000 GLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIADKKD 000000000000000000000000000000000000000000003 VYESGPSSG 467999999 >Syntaxin-12; SWP:Q86Y82; PDB:2DNXA GSSGSSGQLRDFSSIIQTCSGNIQRISQATAQIKNLMSQLGTKQD 888765431000000000000000000000000000000011221 SSKLQENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQR 100000000000000000000000000000000000000000000 LQKERLMNDFSAALNNFQAVQRRVSEKEKESIARSGPSSG 0000000000000000000000000000000013579999 >Heterogeneous nuclear rib; SWP:P52272; PDB:2DO0A GSSGSSGALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRA 999999999765421000000000000000000000000000000 DILEDKDGKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKM 000001100000000000000000000000000000000000000 DERALPKGDFFPPERPQQSGPSSG 012335678999999999999999 >Nuclear protein Hcc-1; SWP:P82979; PDB:2DO1A GSSGSSGVELHKLKLAELKQECLARGLETKGIKQDLIHRLQAYLE 998754310000000000000000000000000000000000000 EHAESGPSSG 0012467999 >Transcription elongation; SWP:NA; PDB:2DO3A GSSGSSGEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENF 999999999987531000000000000000000000000000000 VILFSDLTMHELKVLPRDLQLCSE 000000000000000000000011 >UPF0301 protein HD_1794; SWP:NA; PDB:2DO8A MFGNLQGKFIIATPEMDDEYFDRTVIYICEHNDNGTIGVIINTPT 322110000001123344333211100000111110000001000 DLSVLELLTRMDFQMAKPRIYTQDQMVLNGGPVNQDRGFIVHSKT 000000001112233334433321100000000000000000011 DHEFTHSYKVTDDITLTTSGDVLDSFGTQTAPEKFIVCLGCSTWK 222111000011000000110000011111000000000000000 PHQLEQEIAQNYWLLSEANNQTLFETSYLDRWVEANEMLGISGIL 110000001100000001111111113333321111111223332 APAGRALE 35678999 >NACHT-, LRR- and PYD-cont; SWP:NA; PDB:2DO9A GSSGSSGMALARANSPQEALLWALNDLEENSFKTLKFHLRDVTQF 999876532111110000000000000000000000000000001 HLARGELESLSQVDLASKLISMYGAQEAVRVVSRSLLAMNLMELV 011100000000000000000000000000000000000000000 DYLNQVCLNDYREIYREHVSGPSSG 0000001223568999999999999 >Neural cell adhesion mole; SWP:NA; PDB:2DOCA GSSGSSGQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHG 999975432211110100000000000000000000000000001 GVPIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIR 000000000000000000000000000000000000000000000 VAAVNGKGQGDYSKIEIFQTLPVSGPSSG 00000000000000000000000024589 >Transcription elongation; SWP:NA; PDB:2DODA GSSGSSGARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKI 999988776531100000000000000000000000000000000 VFDPRYLLLNPKERKQVFDQYVKTRAEEERRSGPSSG 0000000000000000000000000000124689999 >Transcription elongation; SWP:NA; PDB:2DOEA GSSGSSGEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKV 999999998643320000000000000000000000000000000 ESDPRYKAVDSSSMREDLFKQYIEKIAKNLDSSGPSSG 00000000000000000000000000001246899999 >Transcription elongation; SWP:NA; PDB:2DOFA GSSGSSGDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTL 999987644222100000000000000000000000000000000 RKDHRWESGSLLEREEKEKLFNEHIEALTKKKRESGPSSG 0000000000000000000000000000000013569999 >Hypothetical protein yqaI; SWP:NA; PDB:2DSMA MVENPMVINNWHDKLTETDVQIDFYGDEVTPVDDYVIDGGEIILR 999999999999987532110000111000110000000000000 ENLERYLREQLGFEFKNAQLEHHHHHH 000000000011112233456799999 >Chromo domain protein 1; SWP:NA; PDB:2DY7A QPEDFHGIDIVINHRLKTSLEEGKVLEKTVPDLNNCKENYEFLIK 765421000000000001222222212100000000000000000 WTDESHLHNTWETYESIGQVRGLKRLDNYCKQFIIE 012333210000000000000000000000000000 >Chromo domain protein 1; SWP:NA; PDB:2DY8A DEFEEFHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEATWEN 975421000000000000000010000000000123333100000 ATDIVKLAPEQVKHFQNRENSKIL 000000000000000000012456 >Homeobox protein PRH; SWP:NA; PDB:2E1OA GSSGSSGKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQ 999999986421000000000000000000000000000000000 LSERQVKTWFQNRRAKWRRSGPSSG 0000000000000000000011346 >Circulin B; SWP:NA; PDB:2ERIA CGESCVFIPCISTLLGCSCKNKVCYRNGVIP 0000000000000000000000000000000 >lung surfactant protein C; SWP:NA; PDB:2ESYA SPPDYSAAPRGRFGIPFFPVHLKRLLILLLL 9999875432211000000000000000000 >Sorting nexin-22; SWP:NA; PDB:2ETTA GHHHHHHLELEVHIPSVGPEAEGPRQSPEKSHMVFRVEVLCSGRR 755433321100000000112333332222110000000001100 HTVPRRYSEFHALHKRIKKLYKVPDFPSKRLPNWRTRGLEQRRQG 000000000000000000000000111111112122210000000 LEAYIQGILYLNQEVPKELLEFLRLRHFPTDPKASNWG 00000000000001010000001111223455667789 >55 kDa erythrocyte membra; SWP:NA; PDB:2EV8A MGHHHHHHSGHMVRLIQFEKVTEEPMGITLKLNEKQSCTVARILH ------------000000001121110000000000000000000 GGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMISL 110000000000000000000000000000000000000000000 KVIPNQQ 0000012 >SH3-containing GRB2-like; SWP:NA; PDB:2EW3A MDQPCCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHG 331000000000011000000000000000000000000000000 ESGFFPINYVEVIVPLEHHHHHH 000000000000001-------- >Copper-transporting ATPas; SWP:NA; PDB:2EW9A MAPQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAE 321110000000011210000000000000000000000100000 IKYDPEVIQPLEIAQFIQDLGFEAAVMEDYAGSDGNIELTITGMT 001111110000000000000000001122112111000000001 CASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDII 010000000000000000000000010000000011111111000 KIIEEIGFHASLAQ 00000000000123 >Protein E7; SWP:NA; PDB:2EWLA GSHMAEPQRHKILCVCCKCDGRIELTVESSAEDLRTLQQLFLSTL 765442200000000000000000000000000000000000000 SFVCPWCATNQ 01000000001 >Hypothetical protein BoR1; SWP:Q7WNU7; PDB:2EXNA MSTTAYQPIAECGATTQSEAAAYQKRWLVANDAGQWLNRDLCPRL 642110000000000000000000000000000000000000000 AEVSVELRMGYLVLKAPGMLRLDIPLDVIEDDDSVRYQMLVGEQT 000000000000000000000000012223321100000001000 VDVVDEGELAAAWISNHAGVPCRILKVHPDMAEVRWPSLEHHHHH 0000000000000000000000000000001111101124----- H - >v-crk sarcoma virus CT10; SWP:P46108; PDB:2EYVA GAMGDSEERSSWYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGD 000000000000000000000000000000000000000000000 YVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGD 000000000000000000000000000000000000000000000 QEFDSLPALLEFYKIHYLDTTTLIEPVSRSRQGR 0000000000000000000000000000000000 >TRANSPOSASE; SWP:P07636; PDB:2EZK_ MIARPTLEAHDYDREALWSKWDNASDSQRRLAEKWLPAVQAADEM 000000000000000000000000000000000000000000000 LNQGISTKTAFATVAGHYQVSASTLRDKYYQVQKFAKPDWAAALV 000000000000000000000000000000000000000000000 DGR 000 >cAMP-dependent protein ki; SWP:P00514; PDB:2EZWA SLRECELYVQKHNIQALLKDSIVQLCTARPERPMAFLREYFEKLE 311111112222110000000000011221110000000000000 KEEAK 12346 >Paired amphipathic helix; SWP:NA; PDB:2F05A ESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHT 431111000000000000000000000000000000000001124 KGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTG 5665421000000000000000000000000000012444----- NGSCEMNSGQKNEEK --------------- >Hypothetical protein ydhA; SWP:NA; PDB:2F09A MGSSHHHHHHSSGLVPRGSHMQTDTLEYQCDEKPLTVKLNNPRQE --------------------3100000000100000000011200 VSFVYDNQLLHLKQGISASGARYTDGIYVFWSKGDEATVYKRDRI 000001000000001111100000000000000100000000000 VLNNCQLQNPQR 000000001112 >Protein apaG; SWP:NA; PDB:2F1EA MQDDPRYRVEVEVSPRFLAHQSTPDEGRYAFAYSIRIQNAGAVPA -----0000000000000000000000000000000000000000 RLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTSGVLL 000000000000000000000000000000000000000000000 ETEQGQMQGHYDMVADDGTEFIAPIAAFVLSVPRTLH 0000000000000000000000000000000------ >Kalata-B1; SWP:NA; PDB:2F2IA CGETCVGGTCNTPGCTCSWDKCTRNGLPV 00000000000000000000000000000 >Calbindin; SWP:NA; PDB:2F33A GSMAESHLQSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQEL --1000000100000000000000000000000000000000000 LQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEENF 000000000000000000000000000000000000000000011 LLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEK 000000000000000000000001000000000000000001100 ANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFL 001110000000000000000011210000000000000000000 LKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNK 000000000000000110000000000000000000000000000 QELDINNISTYKKNIMALSDGGKLYRTDLALILSAGDN 00000000000000000000000000000000000111 >DNA-directed RNA polymera; SWP:NA; PDB:2F3IA MAGILFEDIFDVKDIDPEGKKFDRVSRLHCESESFKMDLILDVNI 433210000000000001222110000000000010000000001 QIYPVDLGDKFRLVIASTLYEDGTLDDGEYNPTDDRPSRADQFEY 111223210000001222445666788877888778976432110 VMYGKVYRIEGDETSTEAATRLSAYVSYGGLLMRLQGDANNLHGF 000000001112345553210000000010000000000000111 EVDSRVYLLMKKLAF 100000000000012 >hypothetical protein PF14; SWP:NA; PDB:2F40A AHHHHHHGSKWIKFTTNLTPEEAKIVQYELSTRDEFYRVFINPYA --------1000111222223221111111122222111111122 KVAEVVIDDSKVNIEELKEKLKGEVIEEKEITLQELIEGSLSWNN 1111001111111000001112234433322233223-------- VLRSKA ------ >Sm-like protein, LSm-14_N; SWP:NA; PDB:2FB7A GHHHHHHLEDPSGGTPYIGSKISLISKAEIRYEGILYTIDTENST ---------------221000000000000000000000011010 VALAKVRSFGTEDRPTDRPIAPRDETFEYIIFRGSDIKDLTVCEP 000000123457865577644444322200000000000000124 PKPIM 68999 >ZZZ3 protein; SWP:NA; PDB:2FC7A GSSGSSGQQMQAESGFVQHVGFKCDNCGIEPIQGVRWHCQDCPPE 999999999996421000000000000000000000000000000 MSLDFCDSCSDCLHETDIHKEDHQLEPIYRSSGPSSG 0000000000000000000000000000000124579 >NCL protein; SWP:NA; PDB:2FC8A GSSGSSGPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVRARIV 998754323221000000000000000000000000000000000 TDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAK 000000000000000000000000000000000000000000001 PKGEGGSGPSSG 134567899999 >NCL protein; SWP:NA; PDB:2FC9A GSSGSSGNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVP 999998875421100000000000000000000000000000000 QNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGP 000000000000000000000000000000000000000000012 RGSPNSGPSSG 46799999999 >Low molecular weight prot; SWP:NA; PDB:2FEKA MGSSHHHHHHSSGLVPRGSHMFNNILVVCVGNICRSPTAERLLQR --------------------1000000000100000000000000 YHPELKVESAGLGALVGKGADPTAISVAAEHQLSLEGHCARQISR 000000000000000001000000000000000001100000000 RLCRNYDLILTMEKRHIERLCEMAPEMRGKVMLFGHWDNECEIPD 000000000000000000000000000000000000000000000 PYRKSRETFAAVYTLLERSARQWAQALNAEQV 01000000000000000000000000001124 >putative thioredoxin; SWP:NA; PDB:2FGXA MGTSHHHHHHSSGRENLYFQGHMNNQVEPRKLVVYGREGCHLCEE ----------------------54221100000000111100000 MIASLRVLQKKSWFELEVINIDGNEHLTRLYNDRVPVLFAVNEDK 000000000000000000000110100011111100000000000 ELCHYFLDSDVIGAYLS 00001101000000001 >Zinc finger protein 42; SWP:NA; PDB:2FI2A GSDPGPEAARLRFRCFHYEEATGPQEALAQLRELCRQWLRPEVRS 321110000000000000000000000000000000000000000 KEQMLELLVLEQFLGALPPEIQARVQGQRPGSPEEAAALVDGLRR 000000000000000000000000000000000000000000012 EPGG 3689 >Hypothetical UPF0346 prot; SWP:NA; PDB:2FJ6A MKSFYHYLLKYRHPKPKDSISEFANQAYEDHSFPKTSTDYHEISS 100000000000111111000000000001100000000000000 YLELNADYLHTMATFDEAWDQYESEVHGRLEHHHHHH 0000000000000000000000000001134579999 >1-phosphatidylinositol-4,; SWP:NA; PDB:2FJLA SIKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDQGNEDEE 000000000001100000000000000000011246899999999 EPKEASGSTELHSSLEVLFQGPNPAILEPEREHLDENSPLGDLLR 999999999999999999999999999999999999999987531 GVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEE 000000000000000001000000000011111000000000000 LQDWVKKIREVAQTA 000000000000001 >Protein E6; SWP:NA; PDB:2FK4A GAMSYSLYGTTLEQQYNKPLSDLLIRCINCQKPLSPEEKQRHLDK -21100001111000000001010000011111000000000000 KQRFHNIRGRWTGRCMSCSRSSRTRRETQL 00000000000001011223579------- >Protein yjbR; SWP:NA; PDB:2FKIA MTISELLQYCMAKPGAEQSVHNDWKATQIKVEDVLFAMVKEVENR 110000000000000000011221100000000000000011111 PAVSLKTSPELAELLRQQHSDVRPSRHLNKAHWSTVYLDGSLPDS 000001111100111111222222222111211000011221000 QIYYLVDASYQQAVNLLPEEKRKLLVQLLEHHHHHH 0000000000000000000000000111-------- >Hydrophobin; SWP:NA; PDB:2FMCA ATTIGPNTCSIDDYKPYCCQSMSGPAGSPGLLNLIPVDLSASLGC 000001111211100000011246899999999997655421000 VVGVIGSQCGASVKCCKDDVTNTGNSFLIINAANCVA 0000000000000000001112222100000000001 >FMR1 PROTEIN; SWP:NA; PDB:2FMR_ ASRFHEQFIVREDLMGLAIGTHGANIQQARKVPGVTAIDLDEDTC 200000000011111233443321000000000000000001110 TFHIYGEDQDAVKKARSFLE 00000000000000000001 >PROTEIN (FIBRONECTIN); SWP:NA; PDB:2FNBA MRGSEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAG 754210000000000000000000000000110000000000012 EGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTT 110000000000000000000000000000000000000000000 LTQQT 00001 >putative Ras Effector Nor; SWP:NA; PDB:2FNFX PRDVRSIFEQPQDPRVLAERGEGHRFVELALRGGPGWCDLCGREV -------------76543333210000001122110000000000 LRQALRCANCKFTCHSECRSLIQLDCR 000000000000000000011111111 >acyl carrier protein; SWP:NA; PDB:2FQ0A LKSTFDDIKKIISKQLSVEEDKIQMNSNFTKDLGADSLDLVELIM 420000000000000011111111000000000000000000000 ALEEKFNVTISDQDALKINTVQDAIDYIEKNNKQ 0000000000000000000000000000000122 >Cytoplasmic protein NCK2; SWP:NA; PDB:2FRWA IPAFVKFAYVAEREDELSLVKGSRVTVMEKCSDGWWRGSYNGQIG 000000000111111111000000001001122110000000000 WFPSNYVLEEVD 001000000001 >major capsid protein; SWP:P49861; PDB:2FTEA SLGSDADSAGSLIQPMQIPGIIMPGLRRLTIRDLLAQGRTSSNAL ------------------------423110000000000000000 EYVREEVFTNNADVVAEKALKPESDITFSKQTANVKTIAHWVQAS 0011112233--------------321110000000000000000 RQVMDDAPMLQSYINNRLMYGLALKEEGQLLNGDGTGDNLEGLNK 000001011000000000000000000000000000000000000 VATAYDTSLNATGDTRADIIAHAIYQVTESEFSASGIVLNPRDWH 000000000000000000000000000000000000000000001 NIALLKDNEGRYIFGGPQAFTSNIMWGLPVVPTKAQAAGTFTVGG 101111111111111122211111001111110000000000000 FDMASQVWDRMDATVEVSREDRDNFVKNMLTILCEERLALAHYRP 000000000000000000111111111110000000000000000 TAIIKGTFSSGS 0000000000-- >conserved hypothetical pr; SWP:NA; PDB:2FVTA MAQRSEIPHFPRTAAIDAYGKGGFYFAGMSHQGSLLFLPDAVWGW 999986542111111011111100001111110000000100000 DVTKPEQIDRYSLQRVFDNANAIDTLIVGTGADVWIAPRQLREAL 000010000000000000000000000000111100000000000 RGVNVVLDTMQTGPAIRTYNIMIGERRRVAAALIAVPLEHHHHHH 000000000000000000000001111000000001123467899 >Sodium/calcium exchanger; SWP:NA; PDB:2FWUA HAGIFTFEEPVTHVSESIGIMEVKVLRTSGARGNVIVPYKTIEGT 211000000000000000000000000111110000000000000 ARGGGEDFEDTCGELEFQNDEIVKTISVKVIDDEEYEKNKTFFLE 001000000000000000010000000000011111111000000 IGEPRLVEMSEKKGGFTITEEYDDKQPLTSKEEEERRIAEMGRPI 000000012355676656554332211111221111100110000 LGEHTKLEVIIEESYEFKSTVD 0100000000000112234456 >Low-density lipoprotein r; SWP:Q07954; PDB:2FYJA SARTCPPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCAYPTC 532101110001111000011111111211222211222121111 FPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCSH 1210000011110000111222111122111233346 >v-SNARE component of the; SWP:Q12255; PDB:2FZ0A MKRFNVSYVEVIKNGETISSCFQPFQKNENYGTITSANEQITPVI 321000000000000000000000111222110001000000000 FHNLIMDMVLPKVVPIKGNKVTKMSMNLIDGFDCFYSTDDHDPKT 000000000000000012100000000000000000000000000 VYVCFTLVDIPKILPIRILSGLQEYESNATNELLSSHVGQILDSF 000000000000000000000000001000000000000000000 HEELVEYRNQTLNS 00000001122245 >Flavodoxin; SWP:P00321; PDB:2FZ5A MVEIVYWSGTGNTEAMANEIEAAVKAAGADVESVRFEDTNVDDVA 000000000000000000000000000000000000000000000 SKDVILLGCPAMGSEELEDSVVEPFFTDLAPKLKGKKVGLFGSYG 000000000000000000000000000000000000000000000 WGSGEWMDAWKQRTEDTGATVIGTAIVNEMPDNAPECKELGEAAA 000000000000000000000000000000000000000000000 KA 00 >AT5G39720.1 protein; SWP:Q9FIX2; PDB:2G0QA GHHHHHHLECSSDSLQLHNVFVYGSFQDPDVINVMLDRTPEIVSA ---------999998654321123323445434433444444454 TLPGFQRFRLKGRLYPCIVPSEKGEVHGKVLMGVTSDELENLDAV 434444456789876544455655434333244344433332344 EGNEYERVTVGIVREDNSEKMAVKTYMWINKADPDMFGEWNFEEW 356544444444556787665432224567688987877777666 KRLHKKKFIETFKKIMECKKKPQGQGNDDISHVLREDQ 54553454355567789999999--------------- >type III secretion system; SWP:Q63K18; PDB:2G0UA MSNPPTPLLADYEWSGYLTGIGRAFDDGVKDLNKQLQDAQANLTK 999999999999999988755443334434423432332343355 NPSDPTALANYQMIMSEYNLYRNAQSSAVKSMKDIDSSILEHHHH 443222122213322332332233233333467799999999999 HH 99 >Eukaryotic translation in; SWP:P55010; PDB:2G2KA LSVNVNRSVMDQFYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKA 999999999999999999986655778999986433555687799 LNRPPTYPTKYFGCELGAQTQFDVKNDRYIVNGSHEANKLQDMLD 998645643543566686554446544322356766676445434 GFIKKFVLCPECENPETDLHVNPKKQTIGNSCKACGYRGMLDTHH 543565578999999966568999998655799999886556899 KLCTFILKNPPENSDSGTGKKEKEKKNRKGKDKEN 976887899999999999999-------------- >Reticulon-4; SWP:Q9NQC3; PDB:2G31A RIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHV 999999997754443235543443332221221232244334322 NCTIKELRRLFLVDD 133234434665435 >Methylated-DNA--protein-c; SWP:Q58924; PDB:2G7HA MIIQIEEYFIGMIFKGNQLVRNTIPLRREEIFNFMDGEVVSNPED 000000000000001100000000011133234333322222322 EHLKVAEIILKLYFAEIDDKKVRELISYKLEVPEFTKKVLDIVKD 310000000000001111221100000011112110000000000 IEFGKTLTYGDIAKKLNTSPRAVGMALKRNPLPLIIPCHRVVAKN 001000000000000111001000000000000100000000011 SLGGYSYGLDKKKFILERERLNMVSFKFNKVY 11111111010000000001112446899999 >putative cytoplasmic prot; SWP:Q57KX2; PDB:2G7JA MYLRPDEVARVLEKAGFTVDVVTNKTYGYRRGENYVYVNREARMG 100000000000000000000000000000000000000000010 RTALIIHPRLKDRSSSLADPASDIKTCDHYQNFPLYLGGETHEHY 000000000000000000000000000100111111122221000 GIPHGFSSRIALERYLNGLFGDEKTDLEHHHHHH 0000000000000000000112------------ >Copper-transporting ATPas; SWP:NA; PDB:2G9OA NDSTATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIV 100000000000010000000000000000000000000000000 VYNASSVTPESLRKAIEAVSPGLYRVSITSEVEIEGRLEHHHHHH 00001110000000000000000000000122------------- >Frataxin homolog, mitocho; SWP:Q07540; PDB:2GA5A MESSTDGQVVPQEVLNLPLEKYHEEADDYLDHLLDSLEELSEAHP 999999999976454211000000000000000000000000000 DCIPDVELSHGVMTLEIPAFGTYVINKQPPNKQIWLASPLSGPNR 000000000000000000000000000011100000000000000 FDLLNGEWVSLRNGTKLTDILTEEVEKAISKSQ 000010000013210000000000000000112 >Hypothetical protein Rpa0; SWP:Q6ND56; PDB:2GBSA VAYWLVKSEPSVWSWDQQVAKGAAGEAWTGVRNHSAKLHMVAMRR 100000000000000000000000000000010000000000000 GDRAFYYHSNEGKEIVGIAEIIREAYPDPTDASGKFVCVDIKADK 000000000000000000000000000001111110000000000 PLKTPVTLAAVKAEPRLADMALMKYSRLSVQPVTAEEWKLVCKMG 000000000000000000000000000000000000000000000 GLLEHHHHHH 0012346789 >ATERF1; SWP:O80337; PDB:2GCC KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDR 000000000000000000000000000000000000000000000 AAFRMRGSRALLNFPLRV 000000000000000000 >Cation-transporting ATPas; SWP:P73241; PDB:2GCFA MAQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVV 310000000001111100000000000010000000000000000 SYHGETTPQILTDAVERAGYHARVLKQQ 0001221100000000000000001123 >Tyrosine-protein kinase B; SWP:Q06187; PDB:2GE9A MTEAEDSIEMYEWYSKHMTRSQAEQLLKQEGKEGGFIVRDSSKAG -32112222100000000000000000000000000000000000 KYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPEL 000000000000000000000000000000000000000000000 INYHQHNSAGLISRLKYPVSQQNKNAPSTHHHHHH 00011356777642100001011135689------ >FADD protein; SWP:Q13158; PDB:2GF5A SDPFLVLLHSVSSSLSSSELTELKYLCLGRVGKRKLERVQSGLDL 210000000000000011000000111111111111110110000 FSMLLEQNDLEPGHTELLRELLASLRRHDLLRRVDDFEAGAAAGA 000000111111010000011011111100000000111111111 APGEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPR 111000000000000000010000000000111100100000010 NLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEV 000000000000000001100000000000000000000000000 QQARDLQNRSG 00111111112 >Genome polyprotein; SWP:P29837; PDB:2GG1A GSEFGSKGLTYTVCDKTKFTWKRAPTDSGHDTVVMEVGFSGTRPC ---------000000000000000000000000000000100000 RIPVRAVAHGVPEVNVAMLITPNPTMENNGGGFIEMQLPPGDNII 000000000000000000000000000100000000000000000 YVGDLNHQWFQK 000000000001 >Proto-oncogene C-crk; SWP:Q64010; PDB:2GGRA GLPNLQNGPIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSG -------10000000000000000000000000000000000000 QWEGECNGKRGHFPFTHVRLLDQQNPDEDFS 0000000000000000000000011------ >Zinc fingers and homeobox; SWP:Q9UKY1; PDB:2GHFA MAHHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV 999999998653110000000000000000000000000000000 VLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKRNNQ 111000000000000000000000000000000000000000100 TIFEQTINDLTF 000000000001 >possible phosphotyrosine; SWP:Q0P8Z8; PDB:2GI4A MKKILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGE 100000000000000000000000000000011000000000000 HDGEGMHYGTKNKLAQLNIEHKNFTSKKLTQKLCDESDFLITMDN 000110010000000000001100000000000000000001000 SNFKNVLKNFTNTQNKVLKITDFSPSLNYDEVPDPWYSGNFDETY 000000000000000000000000000001000000000000000 KILSLACKNLLVFLSKHHHHH 000000000000001113689 >Cycloviolacin O14; SWP:NA; PDB:2GJ0A GSIPACGESCFKGKCYTPGCSCSKYPLCAKN 0000000000111100000000000000000 >Calcitonin-1; SWP:P01263; PDB:2GLGA CSNLSTCVLGKLSQELHKLQTYLATNTGSGTP 22100000000000000000000000011112 >conserved hypothetical pr; SWP:Q8P9Y3; PDB:2GM2A MPLNQEHPDYTYALRAADGRHAKVNEQILQQSFILMPDELVEHWP 999999864422111101100000110000000000110001000 VPSLGQLQPAHMDAVLALNPAVILLGTGERQQFPSTDVLAACLTR 011111000000000000000000000000000000000000000 GIGLEAMTNAAAARTYNVLASEGRRVALAMIVGGLEHHHHHH 000000000000000000000000000000001223566899 >hypothetical protein Pf06; SWP:NA; PDB:2GMGA AHHHHHHGSATRREKIIELLLEGDYSPSELARILDMRGKGSKKVI 998643100000000000000000000000000011111000000 LEDLKVISKIAKREGMVLLIKPAQCRKCGFVFKAEINIPSRCPKC 000000000000000000000000000000000000000010111 KSEWIEEPRFKLERK 110000000000000 >Heme-binding protein 1; SWP:Q9R257; PDB:2GOVA MKQSTHHHHHHNSLFGSVETWPWQVLSTGGKEDVSYEERACEGGK -----------9998876422100000011111000000000000 FATVEVTDKPVDEALREAMPKIMKYVGGTNDKGVGMGMTVPVSFA 000000010000000000000000000000111111100000000 VFPNEDGSLQKKLKVWFRIPNQFQGSPPAPSDESVKIEEREGITV 000011100110000000000000000000100000000000000 YSTQFGGYAKEADYVAHATQLRTTLEGTPATYQGDVYYCAGYDPP 000000111100000000000000001110000100000001122 MKPYGRRNEVWLVKA 322211000000000 >Ubiquitin-like protein 3; SWP:O95164; PDB:2GOWA GHHHHHHLESSNVPADMINLRLILVSGKTKEFLFSPNDSASDIAK ---------321000000000000000000000000000000000 HVYDNWPMDWEEEQVSSPNILRLIYQGRFLHGNVTLGALKLPFGK 000111122333333211100000010000000000000000000 TTVMHLVARETLPEPNSQGQRNREKTGESNCCVIL 00000000012357999999999999999999999 >conserved hypothetical pr; SWP:Q6N5Z3; PDB:2GQBA MSIFGKIMSAIFGDSAAASPGGAQAPATTGAAGTAPTAPQPTAAP 100000000000011122111233456778987655544332111 SIDVAPILDKAVKAKGEKLEWRTSIVDLMKALDIDSSLSARKELA 000000000000000000000000000000000000000000000 KELGYSGDMNDSASMNIWLHKQVMSKLVANGGKLPPEIKH 0000011110000000000000000000000000001012 >KIAA1556 protein; SWP:Q8NHN3; PDB:2GQHA GSSGSSGARFTEGLRNEEAMEGATATLQCELSKAAPVEWRKGLEA 976432100000000000000000000000000000000001000 LRDGDKYSLRQDGAVCELQIHGLAMADNGVYSCVCGQERTSATLT 000000000000100000000000000000000000000000000 VRALPARFIEDSGPSSG 00000123468999999 >Zinc finger protein KIAA1; SWP:Q96KM6; PDB:2GQJA GSSGSSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHM 999999764211111111112211111111111111110000000 EVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAEASEG 000001111011111111111111001001111235789999999 GESGPSSG 99999999 >hypothetical protein; Ynr; SWP:Q3E841; PDB:2GRGA MGSSHHHHHHSSGRENLYFQGHMKSSIPITEVLPRAVGSLTFDEN ----------------------32100000000000000000000 YNLLDTSGVAKVIEKSPIAEIIRKSNAELGRLGYSVYEDAQYIGH 000000000000001000000000000000000000000000000 AFKKAGHFIVYFTPKNKNREGVVPPVGITN 000000000000000122233211233346 >chorismate mutase; SWP:Q57696; PDB:2GTVX MIEKLAEIRKKIDEIDNKILKARWPWAEKLIAERNSLAKDVAEIK 320000000000000000001232221221000000000000000 NQLGIPINDPEREKYIYDRIRKLCKEHNVDENIGIKIFQRLIEHN 000000000000000000000000000000000000000000000 KALQKQYLEETLEH 00000000000002 >ARC/MEDIATOR, Positive co; SWP:Q96RN5; PDB:2GUTA GAMGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVF 654321100000000000000000000000011100000000000 LKAKTRDEYLSLVARLIIHFRDIHNKKSQASV 00000000000000000000000001246899 >Probable acylphosphatase; SWP:P0AB65; PDB:2GV1A MSKVCIIAWVYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSVE 100000000000000000000000000000000000000000000 VVACGEEGQVEKLMQWLKSGGPRSARVERVLSEPHHPSGELTDFR 000000000000000000112221100000000000000000000 IR 01 >chemosensory protein CSP-; SWP:O76476; PDB:2GVSA EEKYTTKYDNVNLDEILANDRLLNKYVQCLLEDDESNCTADGKEL 754211000000000000000000000000000000000000000 KSVIPDALSNECAKCNEKQKEGTKKVLKHLINHKPDVWAQLKAKY 000000000000000000000000000000000000000000000 DPDGTYSKKYEDREKELHQ 0000000000000001124 >UPF0301 protein SO3346; SWP:Q8EBZ9; PDB:2GZOA MESLQNHFLIAMPSLDDTFFERTVIYLCEHDEKGAMGLVINKPLG 532111000001222232211110000011222110000111211 IEVNSLLEQMDLPTEQVSADLAMGSQVLMGGPVSQDRGFVLHTSQ 111111111223567655432111110000112222210000011 PYWANSTELGSGLMLTTSRDVLTAIGSKRSPDKFLVALGYAGWSK 222211122221100011111111112222211100000011111 NQLEQELADNSWLTIPADHALLFDINHEDRWQQASRSLGFEAWQL 111111111110000000000011122111100011123568999 STQAGHALEHHHHHH 9999999-------- >Hypothetical protein PA43; SWP:Q9HW42; PDB:2H3JA MSALQPSRSYRITGYSPAISNGYRQRLFSMGLLPGAALRVVRIAP 643211100000000000011000000000000000000000001 LGDPIQVETRQTSLALRRKDLALLTLVPLD 111100000110000000000000000001 >Haptoglobin-binding surfa; SWP:Q6G8J7; PDB:2H3KA ADESLKDAIKDPALENKEHDIGPREQVNFQLLDKNNETQYYHFFS 100000000000000000010000000000000000011223210 IKDPADVYYTKKKAEVELDINTASTWKKFEVYENNQKLPVRLVSY 000000000000000000000000000000000000000000000 SPVPEDHAYIRFPVSDGTQELKIVSSTQIDDGEETNYDYTKLVFA 000000000000000000000000000000110000000000000 KPIYNDPSL 000000111 >Core-binding factor, ML1-; SWP:Q7Z4J5; PDB:2H7BA GSARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLVNSTLTI 100000000000000000000000000000000000000000000 EEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHAARLAKQNP 000000000001111010000000000000000000001111100 AQYLAQHEQLLLDAS 000111123235578 >Hypothetical protein yvyC; SWP:P39737; PDB:2HC5A LNIERLTTLQPVWDRYDTQIHNQKDNDNEVPVHQVSYTNLAEMVG 110000000000000000001123444543322110000000000 EMNKLLEPSQVHLKFELHDKLNEYYVKVIEDSTNEVIREIPPKRW 000000000010000000011100000000000000000000000 LDFYAAMTEFLGLFVDEKKLEHHHHHH 000000000000001123334567899 >HUMAN CHEMOKINE HCC-2; SWP:Q16663; PDB:2HCC_ HFAADCCTSYISQSIPCSLMKSYFETSSECSKPGVIFLTKKGRQV 753100000000000000000000000010100000000000000 CAKPSGPGVQDCMKKLKPYSI 000000000000000012347 >Small inducible cytokine; SWP:O95715; PDB:2HDLA GSKCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRY -42122332111000000000000000110000000000011111 RGQEHCLHPKLQSTKRFIKWYNAWNEKRRVYEE 110000000000000000000000000012357 >Ubiquitin-protein ligase; SWP:Q00987; PDB:2HDPA SLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNK 766654321011110011000000000000000000000000000 PCPVCRQPIQMIVLTYFP 111100000000000011 >UPF0291 protein ynzC; SWP:O31818; PDB:2HEPA MISNAKIARINELAAKAKAGVITEEEKAEQQKLRQEYLKGFRSSM 532111100000000001111000000000000000011123--- KNTLKSVKIIDPEGNDVTPEKLKREQRNNKLHLEHHHHHH ---------------------------------------- >YorP protein; SWP:O31898; PDB:2HEQA MAGDPLPKYWSYPVGLAVEINNNARYGCPHHVGRKGKIIEHLHSA 999996532000000000000112356433210000000000010 TYDYAVSDETGDITYFKEHELTPLKGGLAYVLEHHHHHH 000000000000000000000000133556799999999 >Hydrogenase-1 operon prot; SWP:P19931; PDB:2HFDA MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSDP 432111000000000000000000000000000111000001333 KRTPEVSDNPVMIGELLREFPDYTWQVAIADLEQSEAIGDRFGVF 443322122110000001111110000000000000000000111 RFPATLVFTGGNYRGVLNGIHPWAELINLMRGLVEPQQERASLEH 111000001110000001121100000000000012468999--- HHHHH ----- >Hypothetical Protein RPA1; SWP:NA; PDB:2HFVA MGSSHHHHHHSSGRENLYFQGHLRELLRTNDAVLLSAVGALLDGA 999999999999999876442100000001000000000000000 DIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLA 001001223345666654321100000011000000000001110 HELRSDD 0001235 >Hypothetical protein; SWP:Q9I4L2; PDB:2HG6A MGSSHHHHHHSSGRENLYFQGHMSITSTDICQAADALKGFVGFNR ----------------------21100000000000000000001 KTGRYIVRFSEDSFGMDVADDSITPTSEFVWSSVRDDVMRLGREQ 110000000001111111111000000000000111100000000 LQILLEQNINERLNIGEPLLVYLRRQDLPEITAQRQLR 00000010000000000000000111111100001245 >Phage-like element PBSX p; SWP:P54342; PDB:2HG7A MILYDAIMYKYPNAVSRKDFELRNDGNGSYIEKWNLRAPLPTQAE 000000000000000100000001111000000000000000000 LETWWEELQKNPPYEPPDQVELLAQELSQEKLARKQLEELNKTLG 000000000011233------------------------------ NELSDIKLSLLSLEHHHHHH -------------------- >Conserved protein MTH1368; SWP:O27421; PDB:2HGAA MGSSHHHHHHSSGRENLYFQGHQPDGVQIDSVVPGSPASKVLTPG ----------------------21100000000111100000000 LVIESINGMPTSNLTTYSAALKTISVGEVINITTDQGTFHLKTGR 000000100000000000000000000000000000000000011 NPNNSSRAYMGIRTSNHLRVRDSVASVLGDTLPFA 23443210110000001234789999999999999 >YjcQ protein; SWP:O31639; PDB:2HGCA MNKDKLRYAILKEIFEGNTPLSENDIGVTEDQFDDAVNFLKREGY ----10000000000000000000000000000000000000000 IIGVHYSDDRPHLYKLGPELTEKGENYLKENGTWSKAYKTIKEIK 0000001110000000000000000000011112357-------- DWIKLEHHHHHH ------------ >Heterogeneous nuclear rib; SWP:P52597; PDB:2HGMA MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSNSADSANDGFV ----------------------------------53221100000 RLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQ 000000000000000000000000000000000000000000000 FASQELAEKALGKHKERIGHRYIEVFKSSQEEVRSY 000000000000000001000000000000000011 >Heterogeneous nuclear rib; SWP:P52597; PDB:2HGNA MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSGDSEFTVQSTT --------------------------------------------1 GHCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEAD 100000000000000000000000000000000011110000000 VEFATHEEAVAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQVM 00000000000000000000001000000000012---------- QGMG ---- >Hypothetical protein ydfO; SWP:P76156; PDB:2HH8A MEGLSMDQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLA ------000000000000000000000000000000000000001 TENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSRE 000000001110000001122111001100000000000001110 ITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQKT 0000000000000000000000000000000000000000001-- TQIFPRLEHHHHHH -------------- >UPF0107 protein AF0055; SWP:O30181; PDB:2HI6A MVKFACRAITRGRAEGEALVTKEYISFLGGIDKETGIVKEDCEIK -10000000000000000000111111111101100001111111 GESVAGRILVFPGGKGSTVGSYVLLNLRKNGVAPKAIINKKTETI 100000000000111221121000000000000000000000000 IAVGAAMAEIPLVEVRDEKFFEAVKTGDRVVVNADEGYVELIELE 0000000000000001000000000000000000000000000-- HHHHHH ------ >Interferon-induced 17 kDa; SWP:P05161; PDB:2HJ8A MDEPLSILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLF -21000000001210000000000000000000000000000000 WLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRLRGGLEHHHHHH 0000110110110000000000000000001------------ >Hypothetical protein ykfF; SWP:P75677; PDB:2HJJA MTQSVLLPPGPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTE ---------000000000000000000000001110000000000 GRMVWRAWNFEPDAGEGLNRYIRTSGIRTDTATRLEHHHHHH 000000000000000000000001100012------------ >Pyrin-only protein 1; SWP:Q8WXC3; PDB:2HM2Q MGTKREAILKVLENLTPEELKKFKMKLGTVPLREGFERIPRGALG 200000000000000000000000000000001110000000001 QLDIVDLTDKLVASYYEDYAAELVVAVLRDMRMLEEAARLQRAA 00000000000000000000000000000010000000000011 >Protein mioC; SWP:NA; PDB:2HNAA MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDLP 100000001111110000000000000000000000000000000 ASGIWLVISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGAIGI 000000001001332233110000000000000000000000000 GSREYDTFCGAIDKLEAELKNSGAKQTGETLKINILDHDIPEDPA 011222343321000000000000000000000122322112111 EEWLGSWVNLLK 100000000111 >NosL protein; SWP:O68481; PDB:2HPUA MDKEDVAQSIVPQDMTPETLGHYCQMNLLEHPGPKAQIFLEGSPA ----------------------------------00000001010 PLFFSQVRDAIAYARGPEQIAPILVIYVNDMGAAGATWDQPGDGN 000000000000000011211000000000122221111111210 WIAADKAFYVVGSARRGGMGAPEAVPFSSRDEAAAFVLAEGGQVL 000000000000001111211000000000000000000000000 ALADITDAMVLTPVETGSEPRADDEDYLGRLRALPHPAGG 0000000000011223322122233--------------- >Splicing factor, arginine; SWP:Q16629; PDB:2HVZA MKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFE 000000001100000000000000000000000000000000000 DPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRKL 000000000000000000000000000001123332221112345 LEVLFNGPLEH 77679999999 >Ribonuclease; SWP:P13312; PDB:2HX6A MTINTEVFIRRNKLRRHFESEFRQINNEIREASKAAGVSSFHLKY 421100000000000000000000000000000000001000001 SQALLDRAIQREIDETYVFELFHKIKDHVLEVNEFLSMPPRPDID 100000000011100000000000000000000011222233555 EDFIDGVEYRPGRLEITDGNLWLGFTVCKPNEKFKDPSLQCRMAI 654344454320000000100000000112232121100000000 INSRRLPGKASKAVIKTQ 012223555554321123 >Transcriptional enhancer; SWP:P28347; PDB:2HZDA MDNDAEGVWSPDIEQSFQEALSIYPPCGRRKIILSDEGKMYGRNE 986666432111000000000000111222222233222111111 LIARYIKLRTGKTRTRKQVSSHIQVLARRKSRDLVPR 1000001111111100000000000011111223467 >Sorting nexin-1; SWP:Q13596; PDB:2I4KA QFDLTVGITDPEKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRR 321000000101112233211000000000112111111000000 FSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSS 000000000001112344444344423333234567789976421 AEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEE 11100000000000000000000000000000011113 >major latex protein-like; SWP:Q9SSK9; PDB:2I9YA GHHHHHHLETEASSLVGKLETDVEIKASADKFHHMFAGKPHHVSK ---------642210000000000000000001111223567899 ASPGNIQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEP 999999998655543221000001111112211110000000000 DKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHLEYE 000000000011100000000000000001122200000000000 KISEEVAHPETLLQFCVEVSKEIDEHLLAEE 0000100000000000000000000000136 >Hypothetical protein; SWP:Q6NA67; PDB:2IDAA MTMGCRHVAGIRTVTPSALGCEECLKIGSPWVHLRICRTCGHVGC 111100000000000000000000000000000000000000000 CDDSPHKHATRHFHATGHPIIEGYDPPEGWGWCYVDEVMFDLSDR 000000000000000000000000001000000000000000000 MTPHNGPIPRYV 000000000111 >PROTEIN (TRANSLATION INIT; SWP:P0A707; PDB:2IFEA VIQVKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGRE 100000000001100000000000000000000000000001233 MAHQQIGMEVLNRVKDDLQELAVVESFPTKIEGRQMIMVLAPKKK 311000000000000000000000000111111000000000011 Q 3 >INOVIRUS; SWP:P03622; PDB:2IFO_ SGGGGVDVGDVVSAIQGAAGPIAAIGGAVLTVMVGIKVYKWVRRA 000000000000000000000000000000000000000000000 M 0 >BETA-MICROSEMINOPROTEIN; SWP:P08118; PDB:2IZ3A GGGSCYFIPNEGVPGDSTRKCMDLKGNKHPINSEWQTDNCETCTC ---110000112223333220001111000000000111000000 YETEISCCTLVSTPVGYDKDNCQRIFKKEDCKYIVVEKKDPKKTC 000000001000000000010000000000000000000000000 SVSEWII 0000000 >BETA-MICROSEMINOPROTEIN; SWP:O02826; PDB:2IZ4A GGGQCYFIPNQSLKPNECQDLKGVSHPLNSVWKTKDCEECTCGQD ---100000000111000000000000000000011100000000 AISCCNTAAIPTGYDTNKCQKILNKKTCTYTVVEKKDPGKTCDVT 000000000000000111000000111000000000000000001 GWVL 1001 >ZINC FINGER PROTEIN HRX; SWP:Q03164; PDB:2J2SA GGSVKKGRRSRRCGQCPGCQVPEDCGVCTNCLDKPKFGGRNIKKQ 997643100000000000000000000000000000000110000 CCKMRKCQNLQWMPSKAYLQKQAKAVK 000000000000001234667899999 >CLEAVAGE STIMULATION FACT; SWP:P33240; PDB:2J8PA HMTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKS 211000000000000010111110000010000000000000013 TGAP 5789 >GLUTAMATE-AMMONIA LIGASE; SWP:NA; PDB:2J9IA SAEHVLTMLNEHAAAFVRFEATDAAGASRSKSIPAQFFEKVIHAR 000000000000000000000000000000000000000000000 GYLEDGEVNAGAAGAAASDIVLMPELSTAAVAAAAAAATAAVICD 000000000000000000000000000000000000000000000 GGAAAAASPRYIARAALAQLQAAGAAAGLLSAFIADFCIFGVPEV 000000000000000000000000000000000000000000000 INSKTISFPASTTAAAADQPQEAAAGGAAGAAAGAAGGAAAAGAA 000000000000000000000000000000000000000000000 EICFLPEAAGAAAADNAFTLRTGLQEVARRYNAIASAAAAAAAAA 000000000000000000000000000000000000000000000 AGAGSHSIWDVGAAGTNAFAGASGARATLTGAKWLAGLLAAAAAA 000000000000000000000000000000000000000000000 AAAAAAAAAAAAAAAAGAAAAAATAWGAAAAACALNIAAAAAAKG 000000000000000000000000000000000000000000000 AQIENKAGAAAANPYLVLAATVAAGLDGIQSAGAAAGAAAADAAA 000000000000000000000000000000000000000000000 AAPSEIPGKMEDALAALEQDAECLKAGLGEAFIRAAVAAAKYELE 000000000000000000000000000000000000000000000 NEETDAEGNKFLEYFI 0000000000000000 >Regulator of G-protein si; SWP:Q9NS28; PDB:2JM5A SMVSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWI 210000000000000000000000000000000000000000000 ACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLDFHTKEVIT 000000011000000000000000000010000000000000000 NSITQPTLHSFDAAQSRVYQLMEQDSYTRFLKSDIYLDLMEGRPQ 00000000000000000000000000000000000000001357- RPTNLRRRSRSFTCNE ---------------- >PROTEIN (METHANE MONOOXYG; SWP:P27356; PDB:2MOBA MSSAHNAYNAGIMQKTGKAFADEFFAEENQVVHESNAVVLVLMKS ----------------------------------21000000011 DEIDAIIEDIVLKGGKAKNPSIVVEDKAGFWWIKADGAIEIDAAE 100000000000111111000000000110000000000000001 AGELLGKPFSVYDLLINVSSTVGRAYTLGTKFTITSELMGLDRAL 10111111010000000000001000011100000112------- TDI --- >Putative periplasmic prot; SWP:Q57SJ8; PDB:2NOCA MKTGYKVMLGALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTIST 999999999999999976431000000000000000000000000 TGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKK 111000000000000000000000000011221221100000000 KLEHHHHHH 011235678 >Selenoprotein W; SWP:P63300; PDB:2NPBA MALAVRVVYSGACGYKPKYLQLKEKLEHEFPGCLDICGEGTPQVT 100000000010100000000000000000000000000112222 GFFEVTVAGKLVHSKKRGDGYVDTESKFRKLVTAIKAALAQCQLE 1000000000000000000001100000000000000000000-- HHHHHH ------ >U1 SMALL NUCLEAR RIBONUCL; SWP:P09012; PDB:2U1A_ MAPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRL 999999765322100000001111000000000000000000000 VPGRHDIAFVEFDNEVQAGAARDALQGFKITQNNAMKISFAKK 1111000000000000000000000000011111000000024 >PROTEIN (SPLICING FACTOR; SWP:P26368; PDB:2U2FA AHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGY 000000000000000000000000000000000000000000000 AFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA 0000000000000000000000000000000000000000 >RAIDD; SWP:P78560; PDB:3CRD_ MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEIN 311000000000000000111111100000000000000000000 AQTTGLRKTMLLLDILPSRGPKAFDTFLDSLQEFPWVREKLKKAR 000000000000000000111000000000000000000000000 EEAMTDLPAG 0000235689 >PLASTOCYANIN; SWP:P00287; PDB:9PCY_ LEVLLGSGDGSLVFVPSEFSVPSGEKIVFKNNAGFPHNVVFDEDE 000000000000000000000000000000000000000000000 IPAGVDAVKISMPEEELLNAPGETYVVTLDTKGTYSFYCSPHQGA 001000000000011000000000000000000000000000000 GMVGKVTVN 000000000 >HYBRID PROTEIN FORMED FROM CHYMOTRYPSIN INHIBITOR-2; SWP:NA; PDB:1CISA MKTEWPELVGKSVEEAKKVILQDKPEAQIIVLEKQAVDNAYAEYR 100000000000000000000000000000000011133212110 IDRVRLAVDKLDNIAQVPRVG 000000000000000000011 >CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 7; SWP:Q9P2D1; PDB:2CKCA LDPDTRIPVINLEDGTRLVGEDAPKNKDLVEWLKLHPTYTVDMPS 999997542235545355899977899989978986865456678 YVPKNADVLFSSFQK 766553334689999 >COBROTOXIN; SWP:NA; PDB:1CODA LECHNQQSSQTPTTTGCSGGETNCYKKRWRDHRGYRTERGCGCPS 000000000000000000000000000000000000000000000 VKNGIEINCCTTDRCNN 00000000000000000 >GLRX2 protein; SWP:Q9NS18; PDB:2CQ9A GSSGSSGSLENLATAPVNQIQETISDNCVVIFSKTSCSYCTMAKK 999887766767665444433433444332223455454444344 LFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVNGTF 445555444333445556545433333333343333222233333 IGGATDTHRLHKEGKLLPLVHQCYLKKSKRKEFQSGPSSG 3333443455566654454455555678876789999999 >CRAMBIN; SWP:P01542; PDB:1CXRA TTCCPSIVARSNFNVCRLPGTSEAICATYTGCIIIPGATCPGDYA 110011000000011112222221001111000111111112212 N 2 >CUG triplet repeat RNA-binding protein 1; SWP:Q92879; PDB:2DHSA MNGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEI 999999999999998643346889999866755664676665433 NVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHH 468999999999998743235888986775565433346799999 PIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIE 974323555555433332223232223434344334334544322 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSP 122345677654433221112344434434543455445665433 MVVKFAD 3334445 >Cell division cycle 5-like protein; SWP:Q1JPG3; PDB:2DIMA GSSGSSGKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAK 998754332222222112211222222222212211221221111 QCKARWYEWLDPSIKKTEWSGPSSG 1111111111122222333457899 >Cell division cycle 5-like protein; SWP:Q1JPG3; PDB:2DINA GSSGSSGKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQC 987543222222222112222222333333222211211112221 LEHYEFLLDKAAQRDSGPSSG 222222233333333334579 >Thioredoxin-like protein 2; SWP:Q5JV01; PDB:2DIYA GSSGSSGMAAGAAEAAVAAVEEVGSAGQFEELLRLKAKSLLVVHF 999999998754322111000000000000000110110000000 WAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYEIS 000100000000000010011111000000000000000000000 SVPTFLFFKNSQKIDRLDGAHAPELTKKVQRHASSGPSSG 0000000000000000000000000000000001357899 >glucoamylase A; SWP:Q2VC81; PDB:2DJMA ASIPSSASVQLDSYNYDGSTFSGKIYVKNIAYSKKVTVVYADGSD 431122100000000000000000000000101000000000111 NWNNNGNIIAASFSGPISGSNYEYWTFSASVKGIKEFYIKYEVSG 111211000000000101111000000000000000000000001 KTYYDNNNSANYQVST 0000001111000011 >PARP11 protein; SWP:Q9NR21; PDB:2DK6A GSSGSSGNEVDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVS 999765433344433332211111112222211122334442111 SEDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQRLI 111011111212221111222322111112211111222221111 KRAPFSSGPSSG 112222323457 >Transcription elongation regulator 1; SWP:O14776; PDB:2DK7A GSSGSSGKAKPVATAPIPGTPWCVVWTGDERVFFYNPTTRLSMWD 875433222111111111111110111111110011122111111 RPDDLIGRADVDKIIQEPPHKKSGPSSG 1111011011001111111122223579 >Carcinoembryonic antigen-related cell adhesion molecule 8; SWP:P31997; PDB:2DKSA GSSGSSGTAQLTIEAVPSNAAEGKEVLLLVHNLPQDPRGYNWYKG 986543222211111112222222111111111121111000111 ETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRN 111111111011111111111111111110001100001111222 DTGSYTLQVIKLNLMSEEVTGQFSVHPETPKPSISGPSSG 1211110011122211111111122233222445678999 >Rho-GTPase-activating protein 7; SWP:Q96QB1; PDB:2DKYA GSSGSSGMCRKKPDTMILTQIEAKEACDWLRATGFPQYAQLYEDF 999999764323344444333222212222222223222322333 LFPIDISLVKREHDFLDRDAIEALCRRLNTLNKCAVMKLESGPSS 221111222223233222221211111011112222333456899 G 9 >Protein vav-2; SWP:Q6PIJ9; PDB:2DLZA GSSGSSGSREIDYTAYPWFAGNMERQQTDNLLKSHASGTYLIRER 997643222111111100011111111001100100000000011 PAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELVE 122211000000000000000011111110011111110000000 YYQCHSLKESFKQLDTTLKYPYSGPSSG 0000000010011000000000112356 >Protein vav-2; SWP:Q6PIJ9; PDB:2DM1A GSSGSSGGTAVARYNFAARDMRELSLREGDVVRIYSRIGGDQGWW 865421111000000011110000000110001111111112110 KGETNGRIGWFPSTYVEEEGIQSGPSSG 1001110000000000011223578899 >palladin; SWP:Q86WE8; PDB:2DM2A GSSGSSGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKD 987531000000000000000000000000000000000000000 GKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQG 000000000000000011000000000000000000000000000 RISCTGRLMVQAVNSGPSSG 00000000000011246799 >KIAA0992 protein; SWP:Q9UQF5; PDB:2DM3A GSSGSSGFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQL 975321100000000000000000000000000000100000000 DGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAG 000000000000000011100000000000000000000000000 QNSFSLELVVAAKESGPSSG 00000000000012358999 >poly (ADP-ribose) polymerase family, member 1; SWP:NA; PDB:2DMJA GSSGSSGMAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIM 765443332211110000000111110000011111110000000 VQSPMFDGKVPHWYHFSCFWKVGHSIRHPDVEVDGFSELRWDDQQ 001111211000000000000000000000000000000000000 KVKKTAEAGGSGPSSG 0000000012346789 >Fuse-binding protein-interacting repressor, isoform b; SWP:Q96D94; PDB:2DNYA GSSGSSGKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFG 999999875422121111000001111111111111111111111 AVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRW 111110001111222222111000001121111111111101111 FAGRKVVAEVYDQERFDNSDLSASGPSSG 11111000111222222222233334578 >Probable RNA-binding protein 23; SWP:Q5REZ2; PDB:2DNZA GSSGSSGLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGR 864332111011111111111111111211111111111222221 SKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTERLDGGS 110000111222221221122112121221111112222234556 GPSSG 68899 >Squamous cell carcinoma antigen recognized by T-cells 3; SWP:Q15020; PDB:2DO4A GSSGSSGVFRYSTSLEKHKLFISGLPFSCTKEELEEICKAHGTVK 999999999875432110000000000000000000000000000 DLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIKENIIKV 000001111110000000001100000000000000001100000 AISNSGPSSG 0111123467 >Splicing factor 3B subunit 2; SWP:Q7Z3K9; PDB:2DO5A GSSGSSGYGAWAAQELQAKLAEIGAPIQGNREELVERLQSYTRQT 543321111111011001001111000111010000000111111 GIVLNRPSGPSSG 1111112346799 >E3 ubiquitin-protein ligase CBL-B; SWP:NA; PDB:2DO6A GSSGSSGNVDAKIAKLMGEGYAFEEVKRALEIAQNNVEVARSILR 532112111111011112221111100110111100111111112 EFSGPSSG 22222235 >Cullin-4B; SWP:Q3TP81; PDB:2DO7A GSSGSSGIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKT 999999999999865445677776665554433332222122212 LSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQ 123332343344455565555544433333233321122333322 YNYIASGPSSG 11122345689 >RNA polymerase II elongation factor ELL; SWP:Q59HG4; PDB:2DOAA GSSGSSGVSQRPFRDRVLHLLALRPYRKAELLLRLQKDGLTQADK 997531111110000000000000000000000000111111100 DALDGLLQQVANMSAKDGTCTLQDCMYKDVQKDWPGYSEGDQQLL 100000000000011110000011111111111110111111111 KRVLVRKLSGPSSG 11111111224578 >Midline-1; SWP:Q3UXC7; PDB:2DQ5A SHIRGLMCLEHEDEKVNMYCVTDDQLICALCKLVGRHRDHQVAAL 654210000000000000000000000000000000000000001 SE 23 >putative CoA-binding protein; SWP:NA; PDB:2DUWA MKENDIAGILTSTRTIALVGASDKPDRPSYRVMKYLLDQGYHVIP 654210110000000000000000000000000000000000000 VSPKVAGKTLLGQQGYATLADVPEKVDMVDVFRNSEAAWGVAQEA 000000000000000000000010000000000000000000000 IAIGAKTLWLQLGVINEQAAVLAREAGLSVVMDRCPAIELPRLGL 000000000000000000000000110000000000000011111 AK 11 >Poly(A)-binding protein; SWP:P93616; PDB:2DYDA GPLGSPIGALASALANSPPETQRMMLGENLYPLVDQLEHDQAAKV 999987645432323332222222222222122111111100000 TGMLLEMDQTEVLHLLESPDALKAKVAEAMEVLRSAQQHT 1111111222222212222111111111011111122346 >Ubiquitin-like protein 4A; SWP:P11441; PDB:2DZIA GSSGSSGMQLTVKALQGRECSLQVPEDELVSTLKQLVSEKLNVPV 976431000000000100000000000000000000000000000 RQQRLLFKGKALADGKRLSDYSIGPNSKLNLVVKPL 000000000000000000000000000000000001 >Synaptic glycoprotein SC2; SWP:Q6IBB2; PDB:2DZJA GSSGSSGMKHYEVEILDAKTREKLCFLDKVEPHATIAEIKNLFTK 975332221111000000000010011111000000000000011 THPQWYPARQSLRLDPKGKSLKDEDVLQKLPVGTTATLYFRDL 1111111110000000110000000000001111100000011 >UBX domain-containing protein 2; SWP:Q3ULE5; PDB:2DZKA GSSGSSGRDRSTIARIQFRLPDGSSFTNQFPSDAPLEEARQFAAQ 999998876554332222222333323333333322222233233 TVGNTYGNFSLATMFPRREFTREDYKRRLLDLELAPSASVVLLPA 333332332111234433333343333222222223222111123 GRPATSIVHSSSGDILMID 3333333333344567999 >Protein FAM100B; SWP:Q8IYN6; PDB:2DZLA GSSGSSGMSVNMDELRHQVMINQFVLAAGCAADQAKQLLQAAHWQ 999766677777776555544653576577778646755787865 FETALSTFFQETNIPNSHHHH 466435433554445579999 >General transcription factor II-I repeat domain-containing protein 1; SWP:Q75MX6; PDB:2DZQA GSSGSSGLRKQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEELF 875311100100000000000001111111111111011100000 VVGLPEGISLRRPNCFGIAKLRKILEASNSIQFVIKRPELLTEGV 000000000000011000000000000000000000111111223 KEPSGPSSG 334568999 >General transcription factor II-I repeat domain-containing protein 1; SWP:Q9UHL9; PDB:2DZRA GSSGSSGLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVI 776544332322221112222223334433222233233323212 IEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTRPFQGLIPK 223334432212223333332332232222222223334444444 PDESGPSSG 455567899 >FAS-associated factor 1; SWP:NA; PDB:2DZMA GSSGSSGRMLDFRVEYRDRNVDVVLEDTCTVGEIKQILENELQIP 976432211111222223222211111111111111122222222 VSKMLLKGWKTGDVEDSTVLKSLHLPKNNSLYVLTPDLPPPSSSS 111111122222211111111111111111111222222333334 HAGALQESLN 5679999999 >Transcription factor 8; SWP:P36197; PDB:2E19A GSSGSSGQPPLKNLLSLLKAYYALNAQPSAEELSKIADSVNLPLD 987643332222211111111111111111111111111121111 VVKKWFEKMQAGQISVQSS 1111101111111112357 >ATP-dependent RNA helicase DDX50; SWP:Q9NTA9; PDB:2E29A GSSGSSGFEPRSLITSDKGFVTMTLESLEEIQDVSCAWKELNRKL 999999997654434455433322233444343222122223333 SSNAVSQITRMCLLKGNMGVCFDVPTTESERLQAEWHDSDWILSV 444333333333445544322222344434434544443333334 PA 45 >Transcription factor GTF2IRD2 beta; SWP:Q69GU6; PDB:2E3LA GSSGSSGLRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVV 765421111110111011001111111111111111111111100 VQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQ 000001110001111111111110111110000001111122233 LGGSGPSSG 456899999 >Insulin-like growth factor 2 mRNA binding protein 3; SWP:O00425; PDB:2E44A GSSGSSGSVPKRQRIRKLQIRNIPPHLQWEVLDSLLVQYGVVESC 999986554433332221001112233333322322222222222 EQVNTDSETAVVNVTYSSKDQARQALDKLNGFQLENFTLKVAYIP 221222222111112222222222112211222233221111222 DEMAAQ 346799 >U6 snRNA-specific terminal uridylyltransferase 1; SWP:Q8TER1; PDB:2E5GA GSSGSSGLRSVFVSGFPRGVDSAQLSEYFLAFGPVASVVMDKDKG 999654210000000000000000000000000000000011110 VFAIVEMGDVGAREAVLSQSQHSLGGHRLRVRPREQKEFQSPASK 000000011110010001111000110000000112456899999 SPKG 9999 >Zinc finger CCHC-type and RNA-binding motif-containing protein 1; SWP:NA; PDB:2E5HA GSSGSSGMSGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVK 999998764433443332221121222222322222122123333 VTIMKDKDTRKSKGVAFILFLDKDSAQNCTRAINNKQLFGRVIKA 322223333222211122233332212111111222222322222 SIAI 2234 >Heterogeneous nuclear ribonucleoprotein L-like; SWP:Q3TBR4; PDB:2E5IA GSSGSSGKRITRPGNTDDPSGGNKVLLLSIQNPLYPITVDVLYTV 999999999998775444443221111111222222111111111 CNPVGKVQRIVIFKRNGIQAMVEFESVLCAQKAKAALNGADIYAG 112211110011122221111001112222222222222222222 CCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRR 2222222222222122222221111122233457 >Methenyltetrahydrofolate synthetase domain containing; SWP:Q2M296; PDB:2E5JA GSSGSSGPGSPPGEGAPLAADVYVGNLPRDARVSDLKRALRELGS 999999987655444443322111222344333332233234343 VPLRLTWQGPRRRAFLHYPDSAAAQQAVSCLQGLRLGTDTLRVAL 333222334433211122333433343333222212232222222 ARQQRDK 2356899 >Suppressor of T-cell receptor signaling 1; SWP:Q8TF42; PDB:2E5KA GSSGSSGSRDIRFANHETLQVIYPYTPQNDDELELVPGDFIFMSP 999987543334432111111211111111110111221111112 MEQTSTSEGWIYGTSLTTGCSGLLPENYITKADECSTWIFHGSSG 211111221100001121110000111111222222355457999 PSSG 9999 >RNA polymerase II elongation factor ELL2; SWP:Q59FW6; PDB:2E5NA GSSGSSGTISQRPYRDRVIHLLALKAYKKPELLARLQKDGVNQKD 754222111111000000000000000000000000000000000 KNSLGAILQQVANLNSKDLSYTLKDYVFKELQRDWPGYSEIDRRS 000000000000000000000000000000011111111111110 LESVLSRKLN 0110011011 >PHD finger protein 1; SWP:A2AB22; PDB:2E5PA GSSGSSGPRLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFE 987654331111111110011111111111100112111000112 DDSQFLVLWKDISPAALSGPSSG 22111100110011222235578 >PHD finger protein 19; SWP:Q5T6S4; PDB:2E5QA GSSGSSGLTEGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDN 765321111100000000111110000001112211100000011 SKYWVLWKDIQHAGVPGE 000001111111123568 >OTTHUMP00000018578; SWP:A0PJJ3; PDB:2E5SA GSSGSSGSTATQKLLRTDKLEVCREFQRGNCARGETDCRFAHPAD 999999986544555544323568978999998657865433456 STMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHLQAKIKAAQH 787889976544467988999999999864334675677689999 QANQAAVA 99999999 >Splicing factor, arginine/serine-rich 8; SWP:Q8IV81; PDB:2E5ZA GSSGSSGTSALAPVAAIIPPPPDVQPVIDKLAEYVARNGLKFETS 999999987655555444444443343334334445555454444 VRAKNDQRFEFLQPWHQYNAYYEFKKQFFLQKEGGDSMQAVSAPE 334444443322333333333333344455655545579999999 >Splicing factor, arginine/serine-rich 8; SWP:Q8IV81; PDB:2E60A GSSGSSGVAPLGLSVPSDVELPPTAKMHAIIERTASFVCRQGAQF 986543222233333333222122221111112222323343343 EIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKEGRYTVLAEN 334334433332221122222111111121222233332233333 KSDEKKKSGVS 34579999999 >protein At5g25060; SWP:Q9C5J3; PDB:2E62A GSSGSSGNGMDEEQRQKRRRIEVALIEYRETLEEQGMKNPEEIER 999964333335435644654675477457646754466885466 KVEINRKRLEVDYGLS 3255335644776658 >KIAA1787 protein; SWP:Q96JN8; PDB:2E63A GSSGSSGELHPRTGRLVSLSACGRTARRQQPGQEFNHGLVLSREP 875321100000000000000010000000000000000000000 LRDGRVFTVRIDRKVNSWSGSIEIGVTALDPSVLDFPSSATGLKG 000000000000000000000000000000000000000000000 GSWVVSGCSVLRDGRSVLEEYGQDLDQLGEGDRVGVERTVAGELR 000000000000000000000000000000000000000000000 LWVNGRDCGVAATGLPPRVWAVVDLYGKCTQITVL 00000000000000000000000000000000000 >HYDIN protein; SWP:Q4G0P3; PDB:2E6JA GSSGSSGPKIHFNFELLDIGKVFTGSAHCYEAILYNKGSIDALFN 654321100000000000000000000000000000000000000 MTPPTSALGACFVFSPKEGIIEPSGVQAIQISFSSIILGNFEEEF 000000000000000000000000000000000000000000000 LVNVNGSPEPVKLTIRGCVIGP 0000011000000000000001 >HMG box-containing protein 1; SWP:Q2KJ34; PDB:2E6OA GSSGSSGGTVSATSPNKCKRPMNAFMLFAKKYRVEYTQMYPGKDN 999999999986434578987643334467899999999999999 RAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPDCWK 999999989868865543255468879999999999999999 >Obscurin-like protein 1; SWP:O75147; PDB:2E6PA GSSGSSGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFPATWYK 754321111110001000000000000000000011110000000 DGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGVSAF 000000000000000010000000000000000000001110000 FGVTVQDPSGPSSG 00000011124578 >Obscurin-like protein 1; SWP:O75147; PDB:2E6QA GSSGSSGTARLVAGLEDVQVYDGEDAVFSLDLSTIIQGTWFLNGE 975432110000000000000110000000000000000000010 ELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALVGF 001111222211211111000011000000000000000000000 SCPGVQDSAALTIQESSGPSSG 0000000000000111124689 >Transcription elongation factor SPT5; SWP:NA; PDB:2E6ZA GSSGSSGFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDL 865432000000000000000000000000000000000000000 KDMLEFPAQELRKY 00000000000001 >Transcription elongation factor SPT5; SWP:NA; PDB:2E70A GSSGSSGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATEST 999999875556666555444332335566454322223345665 ARVELHSTCQTISVDRQRLTTVGSRR 33223455544444445444456899 >Transcription elongation regulator 1; SWP:NA; PDB:2E71A GSSGSSGERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKH 998654333344443333222212222333333443333322221 AKDSRFKAIEKMKDREALFNEFVAAARKKEKESGPSSG 22122122222332222223333444554545789999 >Obscurin; SWP:Q5VST9; PDB:2E7BA GSSGSSGPVRFQEALKDLEVLEGGAATLRCVLSSVAAPVKWCYGN 986432111111111000000110000001111111111111111 NVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCSFGDQTTSAT 111111111011111111000000001100000011121111000 LTVTALPSGPSSG 0001112245799 >Myosin-binding protein C, fast-type; SWP:A1L4G9; PDB:2E7CA GSSGSSGTLAQPVTIREIAEPPKIRLPRHLRQTYIRKVGEQLNLV 999999999986532110000000000000010000000000000 VPFQGKPRPQVVWTKGGAPLDTSRVHVRTSDFDTVFFVRQAARSD 000000000000000000001110000000000000000000000 SGEYELSVQIENMKDTATIRIRVVEKAG 0000000000110000000000000123 >Putative ribosome-binding factor A; SWP:Q8N0V3; PDB:2E7GA GSSGSSGRKEDHARLRALNGLLYKALTDLLCTPEVSQELYDLNVE 999975322111111110000000000000111111110111100 LSKVSLTPDFSACRAYWKTTLSAEQNAHMEAVLQRSAAHMRHLLM 000001111111100000111121111111110110011011111 SQQTLRNVPPIVFVQDKGNAALAELDQLLAVADSGPSSG 111111111111111112222245789999999999999 >Ephrin type-B receptor 4; SWP:Q96L35; PDB:2E7HA GSSGSSGPPAVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKY 653321111000111111111110000000011111101000000 HEKGAEGPSSVRFLKTSENRAELRGLKRGASYLVQVRARSEAGYG 001111111100000000000000011111000000000111111 PFGQEHHSQTQLDSGPSSG 0111101111122444445 >Protein KIAA0319; SWP:Q5VV43; PDB:2E7MA GSSGSSGPRTVKELTVSAGDNLIITLPDNEVELKAFVAPAPPVET 987543221111000000000000111100000000000000111 TYNYEWNLISHPTDYQGEIKQGHKQTLNLSQLSVGLYVFKVTVSS 000000000011111110000000000000000000000000001 ENAFGEGFVNVTVKPARSGPSSG 11000000000000111224589 >Bromodomain adjacent to zinc finger domain 2B; SWP:Q9UIF8; PDB:2E7OA GSSGSSGDSKDLALCSMILTEMETHEDAWPFLLPVNLKLVPGYKK 643221110000000000000000000000000000000000000 VIKKPMDFSTIREKLSSGQYPNLETFALDVRLVFDNCETFNEDDS 000000000000000000000000000000000000000000000 DIGRAGHNMRKYFEKKWTDTFK 0000000000000000000000 >ELF3 protein; SWP:P78545; PDB:2E8PA GSSGSSGQMSLEGTEKASWLGEQPQFWSKTQVLDWISYQVEKNKY 999999765434432221111110111122111111222222233 DASAIDFSRCDMDGATLCNCALEELRLVFGPLGDQLHAQLRDLTS 333322232222111211222222122222211111111111112 SS 36 >AP-1 complex subunit gamma-2; SWP:NA; PDB:2E9GA GSSGSSGPPPAPIPDLKVFEREGVQLNLSFIRPPENPALLLITIT 875432111100000000000000000000000000000000000 ATNFSEGDVTHFICQAAVPKSLQLQLQAPSGNTVPARGGLPITQL 000000000000000000000000000000000000000000000 FRILNPNKAPLRLKLRLTYDHFHQSVQEIFEVNNLPVESWQ 00000000000000000000000000000000000000001 >Filamin-B; SWP:NA; PDB:2E9IA GSSGSSGRVKESITRTSRAPSVATVGSICDLNLKIPEINSSDMSA 999999999999765433222110011111112222211111111 HVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHV 111223322111111222322111111011211111111112222 TGSPFQFTVGPLGEGG 2222121111122458 >Filamin-B; SWP:NA; PDB:2E9JA GSSGSSGRSPFKVKVLPTYDASKVTASGPGLSSYGVPASLPVDFA 999876543221111111100000000000001111111110000 IDARDAGEGLLAVQITDQEGKPKRAIVHDNKDGTYAVTYIPDKTG 000000111111111111111111111111111101010101111 RYMIGVTYGGDDIPLSPYRIRATQTGDAS 11101011111111111010111122346 >Protein MICAL-2; SWP:NA; PDB:2E9KA GSSGSSGDIRPSKLLTWCQQQTEGYQHVNVTDLTTSWRSGLALCA 999864311111111110010010000000111000000000000 IIHRFRPELINFDSLNEDDAVENNQLAFDVAEREFGIPPVTTGKE 000011111000110000000000000000001111000000000 MASAQEPDKLSMVMYLSKFYELFRGTPLRPV 0011111111111110111111112468999 >Putative 47 kDa protein; SWP:NA; PDB:2EAMA GSSGSSGPRCPVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSN 987544445554332232223332221222233333333332333 VMEDQDLLEIGILNSGHRQRILQAIQLLPSGPSSG 21122112222122332232223223334456899 >Connector enhancer of kinase suppressor of ras 2; SWP:NA; PDB:2EANA GSSGSSGVSKWSPSQVVDWMKGLDDCLQQYIKNFEREKISGDQLL 764310000000000000000000000000000000000000000 RITHQELEDLGVSRIGHQELILEAVDLLCALNSGPSSG 00000000000000000000000000000000135789 >Ephrin type-B receptor 1; SWP:NA; PDB:2EAOA GSSGSSGSQPLLDRSIPDFTAFTTVDDWLSAIKMVQYRDSFLTAG 999999998654444333333444333223223233334334444 FTSLQLVTQMTSEDLLRIGITLAGHQKKILNSIHSMRVQISQSPT 444343233222322333323333222211212333344455444 AMASGPSSG 568999999 >RWD domain-containing protein 3; SWP:NA; PDB:2EBKA GSSGSSGMAEPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIH 975433222111111111111111121111111111211110000 TKAEGFMDADIPLELVFHLPVNYPSCLPGISINSEQLTRAQCVTV 000001100000000000111111111100000000000000000 KEKLLEQAESLLSEPMVHELVLWIQQNLRHILSQPETG 00000111111111110000000000000001123568 >RWD domain-containing protein 1; SWP:NA; PDB:2EBMA GSSGSSGMTDYGEEQRNELEALESIYPDSFTVLSENPPSFTITVT 998653221111111111111111111111111111111000000 SEAGENDETVQTTLKFTYSEKYPDEAPLYEIFSQENLEDNDVSDI 000111000000000000111111110000000000011100000 LKLLALQAEENLGMVMIFTLVTAVQEKLNEIVDQIKTR 01000111111111111110000000000000111122 >SAM and SH3 domain-containing protein 1; SWP:NA; PDB:2EBPA GSSGSSGFCGRARVHTDFTPSPYDTDSLKLKKGDIIDIISKPPMG 997632100000000000000000000000000000000000110 TWMGLLNNKVGTFKFIYVDVLSSGPSSG 0000000000000000000001346799 >Replication factor C subunit 1; SWP:NA; PDB:2EBUA GSSGSSGKALGSKEIPKGAENCLEGLIFVITGVLESIERDEAKSL 998765433444333232221111100111222233332222222 IERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDG 112111111222121100011222222221221222211111111 LLNLIRTMPGKKSKYEIAVETE 1121222222222334568999 >DNA repair protein REV1; SWP:NA; PDB:2EBWA GSSGSSGTSSTIFSGVAIYVNGYTDPSAEELRKLMMLHGGQYHVY 765433321111111000000000111111111111111110000 YSRSKTTHIIATNLPNAKIKELKGEKVIRPEWIVESIKAGRLLSY 000000000000011111111111000000000111111110000 IPYQLYT 0000111 >Tripartite motif-containing protein 39; SWP:NA; PDB:2ECJA GSSGSSGALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRW 999987653222221111111111111100011100001111111 WEDLERDFPCPVC 1111222221111 >General transcription factor II-I; SWP:NA; PDB:2ED2A GSSGSSGLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLY 654321111110100000000000011111101111111100000 VEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHST 000001100011111111111110010010000000001111122 TEVSGPSSG 345689999 >Obscurin; SWP:NA; PDB:2EDFA GSSGSSGPAAIIKPLEDQWVAPGEDVELRCELSRAGTPVHWLKDR 997642100000000000000000000000000000000000000 KAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEASKSTAS 000000000000001000000000000000000000000000000 LHVEEKASGPSSG 0000001246789 >Glycine cleavage system H protein; SWP:NA; PDB:2EDGA GSSGSSGRKFTEKHEWITTEEGIGTVGISNFAQEALGDVVYCSLP 987642100000000000000000000000000000000000000 EVGTKLKKQEEFGALESVKAASELYSPLSGEVTEVNEALAENPGL 000000000000000000000000000000000000000000000 VNKSCYEDGWLIKMTLSDPSELDELMSEEAYEKYVKSIEE 0000000000000000000000000000000000000012 >Obscurin; SWP:NA; PDB:2EDHA GSSGSSGRTSAMLTVRALPIKFTEGLRNEEATEGATAVLRCELSK 999999976655544434433333222211122222111222333 MAPVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLC 322111112221111222111122332211112222211111111 MCGKERTSAMLTVRAMPSGPSSG 22233222111112233456789 >NEDD8-conjugating enzyme UBE2F; SWP:NA; PDB:2EDIA GSSGSSGSTRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLH 999986543333333222222222212221111111223333322 CFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPN 221110111121111111111122233333222211121211111 ITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNF 112221112222233444333333322111111100111122222 DDPLNIEAAEHHLRDKEDFRNKVDDYIKRYARSGPSSG 32222222222233333322222222223222234579 >Roundabout homolog 2; SWP:NA; PDB:2EDJA GSSGSSGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKE 975322111111000000000000000000011111111000000 GFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSW 000001111000011100000000000000000001111111100 SAVLDVTESG 0000000111 >Myosin-binding protein C, fast-type; SWP:NA; PDB:2EDKA GSSGSSGPVLIVTPLEDQQVFVGDRVEMAVEVSEEGAQVMWMKNG 764321000000000000000000000000000000000000000 VELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVITNGGQ 000011222210000000100000000000000000000000000 CEAELIVEEKQ 00000000001 >Obscurin; SWP:NA; PDB:2EDLA GSSGSSGPARFIEDVKNQEAREGATAVLQCELSKAAPVEWRKGSE 987532111011111111111111111011111111100000111 TLRGGDRYSLRQDGTRCELQIHGLSVADTGEYSCVCGQERTSATL 101111111111111100001111111000000000110000010 TVRALPARFTQDLKSGPSSG 11111222233445799999 >Myosin-binding protein C, fast-type; SWP:NA; PDB:2EDNA GSSGSSGAEEPTGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKP 999976543222111111111111111000001011111111100 TIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLG 000001111111123331100001111111110000000000001 DRGYYRLEVKAKDTCDSCGFNIDVEAPR 0011000001111111111110101112 >CD48 antigen; SWP:NA; PDB:2EDOA GSSGSSGQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFYTFDQ 999976432221111112211110111111222111111111121 KIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIM 111122222222222222221111111111111111111111100 RVLKKTGNEQEWKIKLQVLDPVPKPVIKIEK 0111222111111111112222212245689 >Shroom family member 4; SWP:NA; PDB:2EDPA GSSGSSGGSFQYVPVQLQGGAPWGFTLKGGLEHCEPLTVSKIEDG 998643211111100000000000000000111100000000011 GKAALSQKMRTGDELVNINGTPLYGSRQEALILIKGSFRILKLIV 000000100000000000000111100000000000010000000 RRRNSGPSSG 0111235689 >Obscurin; SWP:NA; PDB:2EDQA GSSGSSGPSKFIEGLRNEEATEGDTATLWCELSKAAPVEWRKGHE 997532110000000000000000000000000000000000000 TLRDGDRHSLRQDGSRCELQIRGLAVVDAGEYSCVCGQERTSATL 000001000000010000000000000000000000000000000 TVRALPARFIESGPSSG 00000111245689999 >Obscurin; SWP:NA; PDB:2EDRA GSSGSSGPAHFIGRLRHQESIEGATATLRCELSKAAPVEWRKGRE 976431100000000000000000000000000000000000000 SLRDGDRHSLRQDGAVCELQICGLAVADAGEYSCVCGEERTSATL 000000000000010000000000000000000000000000000 TVKALPSGPSSG 000001134579 >Obscurin; SWP:NA; PDB:2EDTA GSSGSSGPAKFTEGLRNEEAVEGATAMLWCELSKVAPVEWRKGPE 976332111111000000000000000000011111100000000 NLRDGDRYILRQEGTRCELQICGLAMADAGEYLCVCGQERTSATL 000000000000111000000000000000000001111100000 TIRALPSGPSSG 000111234579 >FERM and PDZ domain-containing protein 1; SWP:NA; PDB:2EDVA GSSGSSGVRHTVKIDKDTLLQDYGFHISESLPLTVVAVTAGGSAH 864321100000000001100000000011110000000110000 GKLFPGDQILQMNNEPAEDLSWERAVDILREAEDSLSITVVRCTS 000000000000000111111010000000001000000001124 SGPSSG 578999 >Obscurin; SWP:NA; PDB:2EDWA GSSGSSGPARFIEDVKNQEAREGATAVLQCELNSAAPVEWRKGSE 987532110000000000001110000000000000000000000 TLRDGDRYSLRQDGTKCELQIRGLAMADTGEYSCVCGQERTSAML 000000000000000000000000000000000000000000000 TVRALPIKFTESGPSSG 00111111245789999 >Protein tyrosine phosphatase, receptor type, F; SWP:NA; PDB:2EDXA GSSGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPAD 999999999975324544443333221111111101122334555 SRNGVITQYSVAYEAVDGEDRGRHVVDGISREHSSWDLVGLEKWT 655443322111122223333322111112222211111112211 EYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVESGPSSG 11112223334444343322111111223333335678999999 >Receptor-type tyrosine-protein phosphatase F; SWP:NA; PDB:2EDYA GSSGSSGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYT 654321000000000000000000000000000000000000000 VVFRDINSQQELQNITTDTRFTLTGLKPDTTYDIKVRAWTSKGSG 000000000000000000000000000000000000000000000 PLSPSIQSRTMPV 0000000000000 >Protocadherin-9; SWP:NA; PDB:2EE0A GSSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGS 999765322211111111011111111111110000111123343 NAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKV 221111111111111001000011110000011111111100000 TVLASDGSSTPARATVTINVTDVN 001111222211100000011112 >Chromodomain helicase-DNA-binding protein 4; SWP:NA; PDB:2EE1A GSSGSSGKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWE 976422111111000000000111111000000000000100000 SEDVEIQDYDLFKQSYWNH 0111111111100110111 >Contactin-1; SWP:NA; PDB:2EE2A GSSGSSGVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLEK 999976543333322211111111111111111111000000111 IVESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIE 111000011111212221111010001000000111111111111 VGACNSAGCGPPSDMIEAFTKKASGPSSG 01111222211111111111112235689 >Collagen alpha-1(XX) chain; SWP:NA; PDB:2EE3A GSSGSSGLAPPRHLGFSDVSHDAARVFWEGAPRPVRLVRVTYVSS 976543211110000001111100000000011111100000011 EGGHSGQTEAPGNATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLT 111110000011100000001111110000000111122111000 GRVTTKKAPSPSSGPSSG 000011111232456677 >Rho GTPase activating protein 5 variant; SWP:NA; PDB:2EE5A GSSGSSGKNFNPPTRRNWESNYFGMPLQDLVTAEKPIPLFVEKCV 999999999999864221111121110011001100000000000 EFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINLVSMEVTV 000000111000100111111100000000011110000000000 NAVAGALKAFFADLPDPLIPYSLHPELLEAAKIPDKTERLHALKE 000000000000000000111111111111111111111111000 IVKKFHPVNYDVFRYVITHLNRVSQQHKINLMTADNLSICFWPTL 000000000000000000000000000000000000000001100 MRPDFENREFLSTTKIHQSVVETFIQQCQFFFYNGEIVE 111222334433211111000000000000000001111 >Filamin-B; SWP:NA; PDB:2EE6A GSSGSSGEGGAHKVRAGGPGLERGEAGVPAEFSIWTREAGAGGLS 999864210000000000100000000000000000111111000 IAVEGPSKAEITFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIP 000000000000001234332000000000000000000000000 ESPYLVPVIAPSDDA 000000000000124 >Sperm flagellar protein 1; SWP:NA; PDB:2EE7A GSSGSSGMASSVDEEALHQLYLWVDNIPLSRPKRNLSRDFSDGVL 999998643223333222222222222223223211111112111 VAEVIKFYFPKMVEMHNYVPANSLQQKLSNWGHLNRKVLKRLNFS 111112222222222332222222322222222222222222222 VPDDVMRKIAQCAPGVVELVLIPLRQRLEERQRRRKQ 2233222222222222122112212222222233468 >Protein odd-skipped-related 2; SWP:NA; PDB:2EE8A GSSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERP 999999999999999998668898789999996676556668888 YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLA 876667789999999999989988766777899998999999999 VHKTLHMQTSSPTAAS 9999999999999999 >Filamin-B; SWP:NA; PDB:2EE9A GSSGSSGVSDMNGLGFKPFDLVIPFAVRKGEITGEVHMPSGKTAT 999999998643333222121212221112111111112222211 PEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGSHIPESPLQFYVNY 111122332211111222221111000111111111111112223 PNSGS 34578 >Filamin-B; SWP:NA; PDB:2EEAA GSSGSSGPESPLQFYVNYPNSGSVSAYGPGLVYGVANKTATFTIV 999999999999987654422111101100000000100000111 TEDAGEGGLDLAIEGPSKAEISCIDNKDGTCTVTYLPTLPGDYSI 112222111000001111000111111111100000011100000 LVKYNDKHIPGSPFTAKITDDSRRC 0000110011100000001112347 >Filamin-B; SWP:NA; PDB:2EEBA GSSGSSGSDDARRLTVMSLQESGLKVNQPASFAIRLNGAKGKIDA 876542211111110000000000111110000001111111000 KVHSPSGAVEECHVSELEPDKYAVRFIPHENGVHTIDVKFNGSHV 000111111000000111111000000011111000000111111 VGSPFKVRVGEPGQAG 1110000001122467 >Filamin-B; SWP:NA; PDB:2EECA GSSGSSGFKVRVGEPGQAGNPALVSAYGTGLEGGTTGIQSEFFIN 999999999999987643221221111111111112222111111 TTRAGPGTLSVTIEGPSKVKMDCQETPEGYKVMYTPMAPGNYLIS 222222221111112222222222323222212122222111111 VKYGGPNHIVGSPFKAKVTGQRLVSPGSANETSSI 11122221111111111112223334333345688 >Filamin-B; SWP:NA; PDB:2EEDA GSSGSSGSSDASKVTSKGAGLSKAFVGQKSSFLVDCSKAGSNMLL 987532221111111000000000011100000011111111111 IGVHGPTTPCEEVSMKHVGNQQYNVTYVVKERGDYVLAVKWGEEH 111112211111000111111100000001111100000111111 IPGSPFHVTVP 11111000011 >Uncharacterized protein C6orf130; SWP:NA; PDB:2EEEA GSSGSSGGSRITYVKGDLFACPKTDSLAHCISEDCRMGAGIAVLF 987655321111111000011111000000000001100000000 KKKFGGVQELLNQQKKSGEVAVLKRDGRYIYYLITKKRASHKPTY 010110000000000000000000110000000000001111000 ENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEE 000000000000000001010000000122221110110010011 VFEATDIKITVYTL 00111100000011 >Protein phosphatase 1, regulatory (Inhibitor) subunit 3B; SWP:NA; PDB:2EEFA GSSGSSGAESESFVLDFSQPSADYLDFRNRLQADHVCLENCVLKD 999998643222112222223333433333233322212111112 KAIAGTVKVQNLAFEKTVKIRMTFDTWKSYTDFPCQYVKDTYAGS 110111112222222211111112222222111111222334334 DRDTFSFDISLPEKIQSYERMEFAVYYECNGQTYWDSNRGKNYRI 322111011111222232221111112223333222223322121 IRAELKSTQGMTKPHSGPDLG 122222223344567899999 >PDZ domain-containing protein 7; SWP:NA; PDB:2EEHA GSSGSSGSDIIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEE 765443221111000001112210000000112111000000000 GSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTSSSRLHMMV 000000000000000000111111111000001001111100000 RRMGSGPSSG 0112345679 >Cell death activator CIDE-A; SWP:NA; PDB:2EELA GSSGSSGPARPFRVSNHDRSSRRGVMASSLQELISKTLDALVIAT 765432110000000000000000000000000000000000000 GLVTLVLEEDGTVVDTEEFFQTLGDNTHFMILEKGQKWMPSGPSS 000000000000000001000101000000000000000012358 G 9 >SH3 and PX domain-containing protein 2A; SWP:NA; PDB:2EGAA GSSGSSGLEQYVVVSNYKKQENSELSLQAGEVVDVIEKNESGWWF 976543211111111111122211111111111100011111100 VSTSEEQGWVPATYLEAQNSGPSSG 0111111000011111122224689 >SH3 and PX domain-containing protein 2A; SWP:NA; PDB:2EGCA GSSGSSGNLKDVYVSIADYEGDEETAGFQEGVSMEVLERNPNGWW 999754333321111111111222111111111111212222111 YCQILDGVKPFKGWVPSNYLEKKNSGPSSG 111112222211110001001122346799 >Uncharacterized protein KIAA1666; SWP:NA; PDB:2EGEA GSSGSSGKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPM 987531100000001011122233332110000000000000000 DDQGFYYGELGGHRGLVPAHLLDHMSLHGH 011000000011000000000001111357 >Four and a half LIM domains 3; SWP:NA; PDB:2EHEA GSSGSSGPCYDNTFANTCAECQQLIGHDSRELFYEDRHFHEGCFR 999998654222222111111221112211101111110000000 CCRCQRSLADEPFTCQDSELLCNDCYCSAFSSGPSSG 1111111001111011111001111122456899999 >CUB and sushi domain-containing protein 1; SWP:NA; PDB:2EHFA GSSGSSGEIEKGGCGDPGIPAYGKRTGSSFLHGDTLTFECPAAFE 999997542233233444445444444443222222223344432 LVGERVITCQQNNQWSGNKPSCSGPSSG 1211111112233222222222223457 >InaD-like protein; SWP:NA; PDB:2EHRA GSSGSSGPNFSHWGPPRIVEIFREPNVSLGISIVGGQTVIKRLKN 977644332111111100000011111000000011222334433 GEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSE 322111000000011000000000000000100111111111111 AVEAIKNAGNPVVFIVQSLSSTPRVIP 111101111110000001111122223 >HCG3 gene; SWP:NA; PDB:2EJ7A GSSGSSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEN 644321111101100011111000000000110111111111111 KEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPSSG 1111110010001001100111111212221224457 >General transcription factor II-I; SWP:NA; PDB:2EJEA GSSGSSGDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVK 998643233333332222222111111110110011111111111 VPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFI 111111121111111111122111112222222211111111110 KFTVIRPFPGLVINNQLVSGPSSG 000111122222223345689999 >Methylcrotonoyl-CoA carboxylase subunit alpha; SWP:NA; PDB:2EJMA GSSGSSGVSSQETQGGPLAPMTGTIEKVFVKAGDKVKAGDSLMVM 999999997543332211222221111111112112222111111 IAMKMEHTIKSPKDGTVKKVFYREGAQANRHTPLVEFEEEESDKR 223322211112222212112111222222222111222233333 ESESGPSSG 455678999 >Autocrine motility factor receptor, isoform 2; SWP:NA; PDB:2EJSA GSSGSSGASNSQLNAMAHQIQEMFPQVPYHLVLQDLQLTRSVEIT 999654334432222223333443433333322322333222321 TDNILEGRIQVPF 2222332223456 >Ancient ubiquitous protein 1; SWP:NA; PDB:2EKFA GSSGSSGSPDVQLATLAQRVKEVLPHVPLGVIQRDLAKTGCVDLT 997554444344333222222333343323212222322322222 ITNLLEGAVAFMPEDI 2323444333457899 >SH3 and PX domain-containing protein 2A; SWP:NA; PDB:2EKHA GSSGSSGATSYMTCSAYQKVQDSEISFPAGVEVQVLEKQESGWWY 998653211111111111111100001112111111111111000 VRFGELEGWAPSHYLVLDENEQPDPSGKESGPSSG 00111000000111111123356899999999999 >Developmentally-regulated GTP-binding protein 1; SWP:NA; PDB:2EKIA GSSGSSGYLKLVRIYTKPKGQLPDYTSPVVLPYSRTTVEDFCMKI 987532111000000000010000000000000100000000000 HKNLIKEFKYALVWGLSVKHNPQKVGKDHTLEDEDVIQIVKKSGP 000000000000000000000000000000000000000000124 SSG 679 >Collagen alpha-1(XX) chain; SWP:NA; PDB:2EKJA GSSGSSGRSPPSNLALASETPDSLQVSWTPPLGRVLHYWLTYAPA 866431111000000000000000000000111100000000000 SGLGPEKSVSVPGARSHVTLPDLQAATKYRVLVSAIYAAGRSEAV 122100000000000000000000000000000000011000000 SATGQTACPSGPSSG 000000001246678 >UBA domain from E3 ubiquitin-protein ligase HUWE1; SWP:NA; PDB:2EKKA GSSGSSGVNQQQLQQLMDMGFTREHAMEALLNTSTMEQATEYLLT 865332111000000000000000000000111100000000001 HP 11 >Histone acetyltransferase HTATIP; SWP:NA; PDB:2EKOA GSSGSSGGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKL 755321111000000000011111111110000000001111100 FYVHYIDFNRRLDEWVTHERLDLKKIQFPKKEAKTPSGPSSG 000011122221100000000001111111123457899999 >Cytoplasmic tyrosine-protein kinase BMX; SWP:NA; PDB:2EKXA GSSGSSGLDDYDWFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVG 975322112211111111111111110111111000000111221 MYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIPKL 100000001122221110000001111111111122111111111 IHYHQHNSAGMITRLRHPVS 11111111111101011111 >Zinc finger protein 268; SWP:NA; PDB:2EL5A GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG 765432222222222221112223222222222222345678 >Zinc finger protein 268; SWP:NA; PDB:2EL6A GSSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS 754322332221111222221111111111112222344679999 G 9 >Signal-transducing adaptor protein 2; SWP:NA; PDB:2EL8A GSSGSSGEVLAKEEARRALETPSCFLKVSRLEAQLLLERYPECGN 999875444344322322221121111111111111122222211 LLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVIDVEQ 111111234321000011122332211110111122211111111 PFSCTSLDAVVNYFVSHTKKALVPFLLD 1111111111111111112221111223 >Transcriptional adapter 2; SWP:NA; PDB:2ELJA GSSGSSGNMTISDIQHAPDYALLSNDEQQLCIQLKILPKPYLVLK 644332221111111111111111100000000001111111111 EVMFRELLKTGGNLSKSACRELLNIDPIKANRIYDFFQSQNWM 1111111111111111111111111111111000000011111 >SPCC24B10.08c protein; SWP:NA; PDB:2ELKA GSSGSSGFDENWGADEELLLIDACETLGLGNWADIADYVGNARTK 999864433433332222212222333333323222221223222 EECRDHYLKTYIE 2212222333344 >Zinc finger protein 224; SWP:NA; PDB:2ELYA GSSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS 644322233333222344321122222122234445678999999 G 9 >Zinc finger protein 224; SWP:NA; PDB:2ELZA GSSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS 865433221111001111111111111011111111224578999 G 9 >Zinc finger protein 224; SWP:NA; PDB:2EM0A GSSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS 654322232221111222211111111011111122345799999 G 9 >Zinc finger protein 268; SWP:NA; PDB:2EM1A GSSGSSGEKPYSCNECGKAFTFKSQLIVHKGVHTGVKPSGPSSG 76433211121122332111223322222222233323456789 >Zinc finger protein 28 homolog; SWP:NA; PDB:2EM2A GSSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS 864332332222111222221111121111111222224579999 G 9 >Zinc finger protein 28 homolog; SWP:NA; PDB:2EM3A GSSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS 643322232212112222211112222122112222346899999 G 9 >Zinc finger protein 28 homolog; SWP:NA; PDB:2EM4A GSSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS 999999876433222333322122232123223344554434568 G 9 >Zinc finger protein 95 homolog; SWP:NA; PDB:2EM5A GSSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS 865433222211111222211111111011101111234678999 G 9 >Zinc finger protein 224; SWP:NA; PDB:2EM6A GSSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS 865433222332222323322233343234334334567899999 G 9 >Zinc finger protein 224; SWP:NA; PDB:2EM7A GSSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS 865444333221111222221111121111112222222334678 G 9 >Zinc finger protein 224; SWP:NA; PDB:2EM8A GSSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS 643333433222111222111121111011112223333345799 G 9 >Zinc finger protein 224; SWP:NA; PDB:2EM9A GSSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS 754323222211110111111011110011111112346999999 G 9 >Zinc finger protein 347; SWP:NA; PDB:2EMAA GSSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS 654323333322122333322111121111111111246899999 G 9 >Zinc finger protein 473; SWP:NA; PDB:2EMBA GSSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG 65432223332211111221111111101110111124689999 >Zinc finger protein 473; SWP:NA; PDB:2EMCA GSSGSSGTKEHPFKCNECGKTFSHSAHLSKHQLIHAGENPSGPSS 765433333222123444432122221111112233333334456 G 7 >Zinc finger protein 473; SWP:NA; PDB:2EMEA GSSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS 654433322222111222211122221111111222223457899 G 9 >Zinc finger protein 484; SWP:NA; PDB:2EMFA GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS 765433332211122333221111222122222233333346899 G 9 >Zinc finger protein 484; SWP:NA; PDB:2EMGA GSSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS 643222222221111222111111111111111222356789999 G 9 >Zinc finger protein 484; SWP:NA; PDB:2EMHA GSSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS 755445443322222222221122222122222223333334568 G 9 >Zinc finger protein 484; SWP:NA; PDB:2EMIA GSSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS 875543332222111222211121111111111112334689999 G 9 >Zinc finger protein 28 homolog; SWP:NA; PDB:2EMJA GSSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS 864332242222111222211111111011111111234678999 G 9 >Zinc finger protein 28 homolog; SWP:NA; PDB:2EMKA GSSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS 655555443322111222211111111011111111123579999 G 9 >Zinc finger protein 28 homolog; SWP:NA; PDB:2EMLA GSSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS 865432222212111212211111111111101111245678999 G 9 >Zinc finger protein 95 homolog; SWP:NA; PDB:2EMMA GSSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS 865433333222122222211121111111111122222334568 G 9 >Zinc finger protein 347; SWP:NA; PDB:2EMPA GSSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS 975433333323222333322233332122112222346899999 G 9 >Zinc finger protein 268; SWP:NA; PDB:2EMVA GSSGSSGTREKPYECSECGKAFIRNSQLIVHQRTHSGESGPSSG 54433322111111111111111111111111111222235689 >Zinc finger protein 268; SWP:NA; PDB:2EMWA GSSGSSGEKPYGCNECGKDFSSKSYLIVHQRIHTGEKLSGPSSG 99753211010001111000111110110011111245789999 >Zinc finger protein 268; SWP:NA; PDB:2EMXA GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG 99865421000000000000000000000000000135789999 >Zinc finger protein 268; SWP:NA; PDB:2EMYA GSSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS 765443343322222222211122221122122223333444678 G 9 >Zinc finger protein 95 homolog; SWP:NA; PDB:2EMZA GSSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS 876543332211111222211111111111111112222333568 G 9 >Zinc finger protein 268; SWP:NA; PDB:2EN0A GSSGSSGQKPYVCNECGKAFGLKSQLIIHERIHTGESGPSSG 987643111101122211001111100111112222235678 >Zinc finger protein 224; SWP:NA; PDB:2EN1A GSSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS 533222222111001111111011111011111111224578999 G 9 >B-cell lymphoma 6 protein; SWP:NA; PDB:2EN2A GSSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG 543222211000111111110011110110001011346789 >Zinc finger protein 95 homolog; SWP:NA; PDB:2EN3A GSSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 975432221111100111111112222112111111224566799 G 9 >Zinc finger protein 347; SWP:NA; PDB:2EN4A GSSGSSGTKEKPYKCYECGKAFRTRSNLTTHQVIHTGEKRSGPSS 999764321111112222221122222112111111122468999 G 9 >Zinc finger protein 224; SWP:NA; PDB:2EN8A GSSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS 987644332233222333321122232122112222334799999 G 9 >Zinc finger protein 224; SWP:NA; PDB:2ENAA GSSGSSGTAEKPFRCDTCDKSFRQRSALNSHRMIHTGEKPSGPSS 543332222211112333211122221122123234443456899 G 9 >Zinc finger protein 224; SWP:NA; PDB:2ENCA GSSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSS 999988754322112333211122222122122234443455789 G 9 >Zinc finger protein 347; SWP:NA; PDB:2ENFA GSSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 976544333323222443322222232222233344443455679 G 9 >Zinc finger protein 28 homolog; SWP:NA; PDB:2ENHA GSSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 998644344445433443334577787566544543444567999 G 9 >Solute carrier family 30 member 9; SWP:NA; PDB:2ENKA GSSGSSGKYTQNNFITGVRAINEFCLKSSDLEQLRKIRRRSPHED 999875443332111111111111111111111111112345666 TESFTVYLRSDVEAKSLEVWGSPEALAREKKLRKEAEIEYRERLF 533211111111111111111111111111111111122222222 RNQKILREYRD 22333345689 >Sorting nexin-9; SWP:NA; PDB:2ENMA GSSGSSGMATKARVMYDFAAEPGNNELTVTEGEIITVTNPNVGGG 998765332222233221223554432222343211233345554 WLEGKNNKGEQGLVPTDYVEILPNDGKDPFSC 32222345443322233223334444568999 >Synaptojanin-2-binding protein; SWP:NA; PDB:2ENOA GSSGSSGMNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSN 999999765322211111111111112211111111122111121 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVD 111000111122111111111110000111111111211111111 LFRNAGYAVSLRVQHRLQVQNGPISGPSSG 101111110000001111223456789999 >Obscurin; SWP:NA; PDB:2ENYA GSSGSSGHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTV 999643222111111100000111000001112222222111111 GGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRGLTSK 111111222110001111100000110011000000111111111 ASLIVRERSGPSSG 00000011235689 >CDNA FLJ14124 fis, clone MAMMA1002498; SWP:NA; PDB:2EO1A GSSGSSGKVVFAKEQPAHREVQAEAGASATLSCEVAQAQTEVTWY 986421110000000000000000000000000000000000000 KDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGGQQL 000000000000000001000000000000000000000011000 SFRLQVAGQCFG 000000011234 >Roundabout homolog 1; SWP:NA; PDB:2EO9A GSSGSSGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKD 987533211111110010111111100000111111111000011 GVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATW 111111211111111100001111111111100001111111110 SAYIEVQEFGVPVQPPRPTDPNLIPSAP 0000111123233345667899999999 >Zinc finger protein 268; SWP:NA; PDB:2EOFA GSSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG 98765332221111122221112112111111222333335689 >Zinc finger protein 268; SWP:NA; PDB:2EOGA GSSGSSGVKPYGCSECGKAFRSKSYLIIHMRTHTGEKPSGPSSG 75433333332224443222433321122234445679999999 >Zinc finger protein 28 homolog; SWP:NA; PDB:2EOHA GSSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS 433222343322112222211011121112112223345789999 G 9 >Zinc finger protein 268; SWP:NA; PDB:2EOIA GSSGSSGEKLHECSECRKTFSFHSQLVIHQRIHTGENPSGPSSG 76543221111111111111111110111111112246799999 >Zinc finger protein 268; SWP:NA; PDB:2EOJA GSSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG 55443333221211122221111112111111111245799999 >Zinc finger protein 268; SWP:NA; PDB:2EOKA GSSGSSGEKPYVCSDCGKAFTFKSQLIVHQGIHTGVSGPSSG 765333221111222221111112111212222322345557 >Zinc finger protein 268; SWP:NA; PDB:2EOLA GSSGSSGEKPYECTDCGKAFGLKSQLIIHQRTHTGESGPSSG 875332221111111111111111101110111111245678 >Zinc finger protein 95 homolog; SWP:NA; PDB:2EOMA GSSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS 754443333222122222221111121111112222235799999 G 9 >Zinc finger protein 95 homolog; SWP:NA; PDB:2EONA GSSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS 765432221110000011000000011011111111123567999 G 9 >Zinc finger protein 95 homolog; SWP:NA; PDB:2EOOA GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS 986533333222122222221111111111111112222356899 G 9 >Zinc finger protein 268; SWP:NA; PDB:2EOPA GSSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS 543333322211001112211111222122222222345788899 G 9 >Zinc finger protein 224; SWP:NA; PDB:2EORA GSSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS 666543332223223443321233333232222334443345579 G 9 >Zinc finger protein 473; SWP:NA; PDB:2EOUA GSSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG 64332112221000000010000000000000000123568999 >Zinc finger protein 484; SWP:NA; PDB:2EOVA GSSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS 988654332211111111111111111111111222222468999 G 9 >Zinc finger protein 347; SWP:NA; PDB:2EOWA GSSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS 986532222222111111111111122123234334568999999 G 9 >Zinc finger protein 473; SWP:NA; PDB:2EOXA GSSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG 98643333322112233432223333322322233323345689 >Zinc finger protein 473; SWP:NA; PDB:2EOYA GSSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS 997644333332223445444344454234322333444444679 G 9 >Zinc finger protein 473; SWP:NA; PDB:2EOZA GSSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 876543223222222222221122222111111122233334568 G 9 >Zinc finger protein 28 homolog; SWP:NA; PDB:2EP0A GSSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS 986543222111000111101111011011112222345799999 G 9 >Zinc finger protein 484; SWP:NA; PDB:2EP2A GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS 654322233222111222211111221122222323467999999 G 9 >Zinc finger protein 484; SWP:NA; PDB:2EP3A GSSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS 988765442111011121110010111111112222222356999 G 9 >Pescadillo homolog 1; SWP:NA; PDB:2EP8A GSSGSSGKHKKLFEGLKFFLNREVPREALAFIIRSFGGEVSWDKS 865432211110001000000000001000100111100000001 LCIGATYDVTDSRITHQIVDRPGQQTSVIGRCYVQPQWVFDSVNA 111111000000000000000111111111000000000000011 RLLLPVAEYF 1000000001 >Chromodomain-helicase-DNA-binding protein 6; SWP:NA; PDB:2EPBA GSSGSSGNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYE 998754323333322111111111122211111001112222222 ESTWELEEDVDPAKVKEFESLQV 21111112222232222223334 >Zinc finger protein 32; SWP:NA; PDB:2EPCA GSSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG 654222222221111111111111110111111122456799 >Rho GTPase-activating protein 4; SWP:NA; PDB:2EPDA GSSGSSGEGVVEAVACFAYTGRTAQELSFRRGDVLRLHERASSDW 999754332211111221111122210011221111121222221 WRGEHNGMRGLIPHKYITLPAGTEKQVVGAG 1111222221111121111222223468999 >Zinc finger protein 32; SWP:NA; PDB:2EPTA GSSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG 99865310000000000000000000111111112457999 >Zinc finger protein 32; SWP:NA; PDB:2EPUA GSSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG 999643221111100011111111121111111111223579999 >Zinc finger protein 268; SWP:NA; PDB:2EPVA GSSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG 65433333222211122221112222111111122233324568 >Zinc finger protein 268; SWP:NA; PDB:2EPWA GSSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSS 987654333333332333322223343233222212223456667 G 8 >Zinc finger protein 268; SWP:NA; PDB:2EPYA GSSGSSGEKLHECNNCGKAFSFKSQLIIHQRIHTGESGPSSG 986533221111111111111111111111111111234455 >Zinc finger protein 28 homolog; SWP:NA; PDB:2EPZA GSSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS 754332221111011223221111111111112222234568999 G 9 >Zinc finger protein 347; SWP:NA; PDB:2EQ0A GSSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS 999998653321111222211112222122223233443346899 G 9 >Zinc finger protein 347; SWP:NA; PDB:2EQ1A GSSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS 986544322222222322222122222122222223332346799 G 9 >Tumor necrosis factor, alpha-induced protein 3; SWP:NA; PDB:2EQEA GSSGSSGTPGDRTGTSKCRKAGCVYFGTPENKGFCTLCFIEYSGP 999999997653322211111111111121111001111122235 SSG 689 >Tumor necrosis factor, alpha-induced protein 3; SWP:NA; PDB:2EQGA GSSGSSGSLMDVKCETPNCPFFMSVNTQPLCHECSERRQKNQNSG 998643222222111122121111111111000111122223333 PSSG 4467 >Tudor domain-containing protein 4; SWP:NA; PDB:2EQKA GSSGSSGMIAAYENSKWEPVKWENDMHCAVKIQDKNQWRRGQIIR 975311000000000000000000000000000000000000000 MVTDTLVEVLLYDVGVELVVNVDCLRKLEENLKTMGRLSL 0000000000000000000000000000000001133568 >PHD finger protein 20-like 1; SWP:NA; PDB:2EQMA GSSGSSGMSKKPPNRPGITFEIGARLEALDYLQKWYPSRIEKIDY 644433221111111111111111110001111111100000111 EEGKMLVHFERWSHRYDEWIYWDSNRLRPLERPALRKEGLKDE 1110000001112331000000100001111122323445678 >Hypothetical protein LOC92345; SWP:NA; PDB:2EQNA GSSGSSGELPSVEELTIILPEDIELKPLGMVSSIIEQLVIIESMT 877654322210110000000000000000000000000000000 NLPPVNEETVIFKSDRQAAGKIFEIFGPVAHPFYVLRFNSSDHIE 000000000000000000000000000000000000001000000 SKGIKIKETMYFA 0000000000000 >TNF receptor-associated factor 3-interacting protein 1; SWP:NA; PDB:2EQOA GSSGSSGMNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDI 986432111111111111000000000011111111100000000 ITEVIRMTGFMKGLYTDAEMKSDNVKDKDAKISFLQKAIDVVVMV 000000000000000000000010011110000000000000111 SGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLSSDDAVRRV 111111110111111111111110011001001110000000000 LAGEK 00112 >ATP-dependent RNA helicase DHX8; SWP:NA; PDB:2EQSA GSSGSSGEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHI 865431100000000000000000000000000000000000000 SELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQET 000011111100000000000000000000000000000000010 GEDLNPNRRRNLV 0001121134679 >PHD finger protein 20-like 1; SWP:NA; PDB:2EQUA GSSGSSGFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQFYD 987654321111111000011111100000001133210000011 GVIRCLKRMHIKAMPEDAKGQDWIALVKA 10000000000011122122334555789 >Zinc finger protein 484; SWP:NA; PDB:2EQWA GSSGSSGEKPYVCTECGKAFIRKSHFITHERIHTGESGPSSG 543222111101111111001010001101111122457899 >Kelch repeat and BTB domain-containing protein 4; SWP:NA; PDB:2EQXA GSSGSSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQN 975322322112112222222233333222221111111111111 TEEFLHLPHRLLTDIISDGVPCSQNPTEAIEAWINFNKEEREAFA 111111111110010011111221111111111122222222211 ESLRTSLKEIGENVH 111111111223457 >Jumonji, AT rich interactive domain 1B; SWP:NA; PDB:2EQYA GSSGSSGEAQTRVKLNFLDQIAKYWELQGSTLKIPHVERKILDLF 999999999999977765665666788999877668799765445 QLNKLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYE 556788999999999999998887677677899998998788678 RILNPYNLFLSGDSLRCLQKPNLTSDTKDKEY 86788799999999999999999999999999 >Nucleocapsid protein* (NC*); SWP:Q9PY17; PDB:2EXFA NVKCFNCGKEGHTARNCRAPRKKGCWKCGKEGHQMKDCTERQAN 11000000000000000100000000000000000000111345 >FLAVORIDIN; SWP:NA; PDB:1FVLA GEECDCGSPSNPCCDAATCKLRPGAQCADGLCCDQCRFKKKRTIC 643222222211101222111111100111000111000000000 RIARGDFPDDRCTGLSNDCPRWNDL 0001111100000010000011125 >HEXIM1 protein; SWP:O94992; PDB:2GD7A GAMAGDGSEFLQRDFSETYERYHTESLQNMSKQELIKEYLELEKC 665655555444555666554444433333323322322322222 LSRMEDENNRLRLESKRLGGDDARVRELELELDRLRAENLQLLTE 222223223222322222333244234224313421321221221 NELHRQQERAPLSKFGD 34235644555777899 >Leader protein; p65 homol; SWP:P59641; PDB:2GDTA GHVQLSLPVLQVRDVLVRGFGDSVEEALSEAREHLKNGTCGLVEL 100000000000000000000000000000000000000000000 EKGVLPQLEQPYVFIKRSDALSTNHGHKVVELVAEMDGIQYGRSG 000000000000000001122443210000000000000101110 ITLGVLVPHVGETPIAYRNVLLRKNG 00000000000100000000000123 >DNA mismatch repair protein MSH6; SWP:Q3SWU9; PDB:2GFUA KAKNLNGGLRRSVAPAAPTSSDFSPGDLVWAKMEGYPWWPSLVYN 999999998987656555665544433322233444332112233 HPFDGTFIREKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTGSKSK 444555455668765433211223322233344444333433444 EAQKGGHFYSAKPEILRAMQRADEALNKDKIKRLELAVSDEPSE 43445443334333233223323334444444344333445789 >PDF1; SWP:Q8W434; PDB:2GL1A KTCENLANTYRGPCFTTGSCDDHCKNKEHLRSGRCRDDFRCWCTR 100000000000000000000000000000000000000000000 NC 01 >Ras GTPase-activating protein 1; SWP:Q7Z4M2; PDB:2GSBA GSSGSSGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRP 976544322222111111111111111111111111111000011 SDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIGDII 122222111000111111111111122222111111111111110 DHYRKEQIVEGYYLKEPVPMQDQSGPSSG 11011110111100110111112335579 >FYN-binding protein; SWP:Q05DE9; PDB:2GTJA EKKEQKEKEKKEQEIKKKFKLTGPIQVIHLAKACCDVKGGKNELS 999999876532211111111222222211111212121211101 FKQGEQIEIIRITDNPEGKWLGRTARGSYGYIKTTAVEIDYDSLK 112111111111121111100001121100001111112223333 LKKDLE 456789 >Sex-determining region on Y / HMGB1; SWP:P63159; PDB:2GZKA VQDRVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKM 000000000000000000000000000000000000000000000 LTEAEKWPFFQEAQKLQAMHREKYPNYKYRKGETKKKFKDPNAPK 000000000000000000000000000000000000000000000 RPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 000000000000000000000000000000000000000000000 QPYEKKAAKLKEKYEKDIAAYRAK 000000000000000000000000 >Envelope glycoprotein; SWP:Q9IZI6; PDB:2H0PA MEKLRIKGMSYTMCSGKFSIDKEMAETQHGTTVVKVKYEGAGAPC 111110011000000000000000000000000000000000000 KVPIEIRDVNKEKVVGRIISSTPLAENTNSVTNIELEPPFGDSYI 000000000000000000000000000000000000000000000 VIGVGNSALTLHWFRKGSSIGK 0000000000000000011100 >Hypothetical protein ycgL; SWP:Q1RCR7; PDB:2H7AA GSMPKPGILKSKSMFCVIYRSSKRDQTYLYVEKKDDFSRVPEELM 999999998877654322234555543212344454566566655 KGFGQPQLAMILPLDGRKKLVNADIEKVKQALTEQGYYLQLPPPP 554443333333456665545434454456556765433344567 EDLLKQHLSVMGQKTDDTNK 77766655677899999999 >Fibronectin; SWP:Q6MZF4; PDB:2HA1A SGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGR 998766666667655444445667899998776656677899999 WKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFT 766566677665443445567776666677899999988777766 TTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSA 666677778899999999999999999999888999988889989 SDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIV 887655556678999999876655566778777789999999988 NVYQISEDGEQSLILSTSQTT 776655554567888999999 >Cytoskeleton assembly control protein SLA1; SWP:P32790; PDB:2HBPA KKSRLWVDRSGTFKVDAEFIGCAKGKIHLHKANGVKIAVAADKLS 310000000000000000000000000000000000000000000 NEDLAYVEKITGFSLEKFKAN 000000000000000000012 >Histone deacetylase complex subunit SAP18; SWP:O00422; PDB:2HDEA GSHMRVTQEEIKKEPEKPIDREKTSPLLLRVFTTNNGRHHRMDEF 999999999999854321000000000000000000000111111 SRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAI 132211100000000000000000000000000000000000000 VFTDVKRPGYRVKEIGSTMSGRKGTDDSMTLQSQKFQIGDYLDIA 001123322110000000000000000000000000000000000 ITPPNRAPPPSGR 0000111234688 >Hypothetical protein yqcC; SWP:Q46919; PDB:2HGKA MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTM 311100000000000001111111122111100011101000111 EPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYYEMALATDHPQR 111100110000000000111111111000000001111111110 ALILAELEKLDALFADDASLEHHHHHH 000000000000001123456799999 >KH-type splicing regulatory protein; SWP:Q92945; PDB:2HH2A GEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGD 100000000000000001100000000000000000000001100 PNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVG 0000000000000000000000000000000001 >KH-type splicing regulatory protein; SWP:Q92945; PDB:2HH3A GIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEK 000000000000000010000000000000000000111111000 IAHIMGPPDRCEHAARIINDLLQSLR 00000000000000000000000011 >HIRUDIN VARIANT-1; SWP:NA; PDB:4HIRA VVYTDCTESGQNLCLCEGSNVCGQGNKCILGSDGEKNQCVTGEGT 110000100000000011000001100001123311110001000 PEPQ 0112 >Hypothetical protein yqbF; SWP:P45922; PDB:2HJQA MFTAKLIKGKTYNVMGITFRAGVSQTVPKKLYEYLNENPYFILTQ 643356899999999999889976456899889989999766657 ELNNQKDDPINYTESELKGMNKAEHESIISNLGRNPSDFKNADER 688887764344567656655454345446656665676654553 IAYILKQIDNKGELEHHHHHH 343244345445555678999 >Chemotaxis protein cheW; SWP:P0A967; PDB:2HO9A MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQV 999998654555433322211111121111112211111111211 TRIANTPAFIKGVTNLRGVIVPIVDLRIKFSQVDVDYNDNTVVIV 112322221111111122211100111112222221221111001 LNLGQRVVGIVVDGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLG 111221110001111112222233333222233222222222222 ALGDRMLILVNIEKLLNSEEMALLDSAASEVA 23332221111122122222222233233334 >Putative TRANSCRIPTIONAL REGULATOR; SWP:Q1CUA1; PDB:2HQNA GSGSNVIEIGDLTISPDEEKIIYKGREVEVKGKPFEVLTHLARHR 322100000000000000000000000000000000000000000 DQIVSKEQLLDAIWEEPEMVTPNVIEVAINQIRQKMDKPLGISTV 000000000000000000000000000000000000000000000 ETVRRRGYRFCYPKPACEE 0000000000000001345 >Replicase; SWP:A5A423; PDB:2HW0A PSKKNGRSGPQPHKRWVFTLNNPSEDERKKIRDLPISLFDYFIVG 976543321000000000000000000000000000000000000 EEGNEEGRTPHLQGFANFVKKQTFNKVKWYLGARCHIEKAKGTDQ 000100000000000000000000000000000000000000000 QNKEYCSKEGNLLMECGAPRSQGQR 0000000000000000000011234 >Putative replicase-associated protein; SWP:O39828; PDB:2HWTA ARQVICWCFTLNNPLSPLSLHDSMKYLVYQTEQGEAGNIHFQGYI 100000000000000000000000000000000000000000000 EMKKRTSLAGMKKLIPGAHFEKRRGTQGEARAYSMKEDTRLEGPW 000000000000000000000000111110100000000000000 EYGE 0000 >De novo designed diiron protein; SWP:NA; PDB:2HZ8A MDELRELLKAEQQAIKIYKEVLKKAKEGDEQELARLIQEIVKAEK 000000000000000000000000000000000000000000000 QAVKVYKEAAEKARNPEKRQVIDKILEDEEKHIEWLKAASKQGNA 000000000000000000000000000000000000000000000 EQFASLVQQILQDEQRHVEEIEKKN 0000000000000000000000000 >Ubiquitin carboxyl-terminal hydrolase 16; SWP:NA; PDB:2I50A PVCRHIRKGLEQGNLKKALVNVEWNICQDCKTDNKVKDKAEEETE 210000000000000000000000000000001111222333332 EKPSVWLCLKCGHQGCGRNSQEQHALKHYLTPRSEPHCLVLSLDN 110000000000000000000000000000000000000000000 WSVWCYVCDNEVQYCSSNQLGQVVDYVRKQAS 00000000000000110000000000000001 >Bromodomain-containing protein 7; SWP:Q9NPI1; PDB:2I7KA MEEVEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMII 422111111011001000000000000000000111100000000 KHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIY 000000000000000000111100000000000000000000000 YKAAKKLLHSGMKILSQERLEHHHHHH 000000001111111111222357999 >Hypothetical protein PH1500; SWP:NA; PDB:2I7MA EGVIMSELKLKPLPKVELPPDFVDVIRIKLQGKTVRTGDVIGISI 421000000000000000000000000000000000000000000 LGKEVKFKVVQAYPSPLRVEDRTKITLVTHP 0000000000000000000000000000013 >Four-alpha-helix bundle; SWP:NA; PDB:2I7UA MKKLREEAAKLFEEWKKLAEEAAKLLEGGGGGGGGELMKLCEEAA 531111000000010111111111111133232110100000000 KKAEELFKLAEERLKKL 00000000000111234 >Mesoderm development candidate 2; SWP:Q91WK8; PDB:2I9SA GPGKPESILKMTKKGKTLMMFVTVSGNPTEKETEEITSLWQGSLF 988654212234321111100000111111100000010001101 NANYDVQRFIVGSDRAIFMLRDGSYAWEIKDFLVSQDRCAEVTLE 111100000111100000000011101100110111111100111 GQMYPGK 2221346 >Prophenoloxidase activating proteinase-2; SWP:NA; PDB:2IKDA QACTLPNNDKGTCKSLLQCDVASKIISKKPRTAQDEKFLRESACG 000000000000000000000000001112111100000000001 FDGQTPKVCCP 11110000000 >Prophenoloxidase activating proteinase-2; SWP:NA; PDB:2IKEA LSCLTPDNKPGKCVNIKKCTHLAEIEEDPIGEDETTYLKNSVCAG 000011111100000000000000011111110100001100012 PEDNSVCCG 321000000 >Structural polyprotein (PP) p1; SWP:Q9WGE6; PDB:2IMUA FGFKDIIRAIRRIAVPVVSTLFPPAAPLAHAIGEGVDYLLGDEAQ 432221122122222222233232222111222222223334679 A 9 >COAGULATION FACTOR XI; SWP:NA; PDB:2J8JA FCHSSFYHDTDFLGEELDIVAAKSHEACQKLCTNAVRCQFFTYTP 110000000000000000001111110000000100010000001 AQASCNEGKGKCYLKLSSNGSPTKILHGRGGISGYTLRLCKMDNE 111101111100000012110100111111000000000000113 >Transcriptional regulator ATRX; SWP:P46100; PDB:2JM1A GAMKRGEDGLHGIVSCTACGQQVNHFQKDSIYRHPSLQVLICKNC 999877643444332211222333333322221111111112221 FKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCIL 122122222223433211100011112111112211101112122 RNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQL 222223323322343322221122222222222223332333344 LQQNKK 444556 >TNF receptor-associated factor 6; SWP:Q9Y4K3; PDB:2JMDA GPLGSKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCP 544322111111111111111111111111110111111111111 VDNEILLENQLFPDNFAK 111111112111233445 >Protein YNG1; SWP:Q08465; PDB:2JMIA QEEVYCFCRNVSYGPMVACDNPACPFEWFHYGCVGLKQAPKGKWY 321000101011110000000110000000000000111111000 CSKDCKEIANQRSKS 000000111112357 >Chromosomal replication initiator protein dnaA; SWP:P35888; PDB:2JMPA MEQFNAFKSLLKKHYEKTIGFHDKYIKDINRFVFKNNVLLILLEN 322222112222333343333333323222112233321111122 EFARNSLNDNSEIIHLAESLYEGIKSVNFVNEQDFFFNLAKLEEN 222222223222122112212222221111122223333344555 SRDTLYQNSG 5567899999 >Hypothetical protein MJ0781; SWP:Q58191; PDB:2JMZA MNTGHDGALAYDEPIYLSDGNIINIGEFVDKFFKKYKNSIKKEDN 654321100000001000100000000000000010111011111 GFGWIDIGNENIYIKSFNKLSLIIEDKRILRVWRKKYSGKLIKIT 110000011010000001111000010100000000000000000 TKNRREITLTHDHPVYISKTGEVLEINAEMVKVGDYIYIPKNNTI 000000000000000000111111100000000000000000000 NLDEVIKVETVDYNGHIYDLTVEDNHTYIAGKNEGFAVSASSGTL 000000000001000000001011100000000000000111123 HHHHHH 456899 >E3 ubiquitin-protein ligase suppressor of deltex; SWP:NA; PDB:2JMFA VSLINEGPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPRPGAP 4334310000000000000000000000000000000011246 >Pheromone En-6; SWP:NA; PDB:2JMSA TDPEEHFDPNTNCDYTNSQDAWDYCTNYIVNSSCGEICCNDCFDE 100000000000000000000000000000011000000000000 TGTGACRAQAFGNSCLNW 000000000000000000 >Hypothetical protein Ta0956; SWP:NA; PDB:2JMKA MTLCAMYNISMAGSHPTTICVVMDRFLESFSELYDIIDENDTDVM 100000000000010000000000000000000000000000000 MDFISRFARTDEIMPEDKTVGFVVVNADKKLMSVSFSDIDENMKK 000000001222211100000000000000000000111100000 VIKATAEKFKNKGFKVETDM 00000000000000000012 >Peptidyl-prolyl cis/trans isomerase; SWP:NA; PDB:2JM7A SMVNTGLPAGWEVRHSNSKNLPYYFNPATRESRWEPPADTDMETL 311000001110001112111100001111100011111111111 KMYMATYH 11111123 >Hypothetical protein Atu4866; SWP:NA; PDB:2JMBA MQHPYVGIWVTADGRIRQELLPNGRYDEARGNRKSAYQGRYEVRG 100000000000000000000000000000010000000000000 AHINYWDDTGFTADGDFVSANELHHGGMTFYREK 0000000000000000000000000000000000 >YkvR protein; SWP:O31683; PDB:2JN9A MVKTLRLNNVTLEMAAYQEESEPKRKIAFTLNVTSETYHDIAVLL 211111122111111111111111000101111122223322222 YEKTFNVEVPERDLAFRGEMTNYSTSLTNLYEPGAVSEFYIEITE 111111111222211111011122233246777531111100000 IDKNADSLEHHHHHH 012455789999999 >Uncharacterized BCR; SWP:Q8NQM9; PDB:2JNYA MSLDPQLLEVLACPKDKGPLRYLESEQLLVNERLNLAYRIDDGIP 533222211100000000000001110000011000000001100 VLLIDEATEWTPNNLE 0000100001113456 >Troponin C; SWP:NA; PDB:2JNFA MGDVSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGI 977776666544543454466556788765344654665676677 QQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQ 899999889768866887654344543454456666765555565 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDE 554565466456676643333334445667799887876665455 IDADGSGTVDFEEFMGVMTGGDE 44566554333332333334578 >Serine/threonine-protein kinase 4; SWP:Q5H9T5; PDB:2JO8A GSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPIL 321000000000000000000000001111111111111111222 DAIEAK 222222 >Hypothetical lipoprotein yehR; SWP:P33354; PDB:2JOEA MGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETKIQFASIG 753211100000011100000000011000000000000011111 ATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTYAQENVTIDMEK 111111111111111111111100000001111000000000000 VDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVKLEHH 000111111121211111111100000000011111111111233 HHHH 5789 >Hypothetical protein HP_0495; SWP:O25237; PDB:2JOQA QGHMPSDSKKPTIIYPCLWDYRVIMTTKDTSTLKELLETYQRPFK 999976431110010000000000000000000000000000000 LEFKNTSKNAKFYSFNVSMEVSNESERNEIFQKISQLDKVVQTLG 000000000000000000000000000000000000000000001 S 2 >Huwentoxin-11; SWP:P68425; PDB:2JOTA IDTCRLPSDRGRCKASFERWYFNGRTCAKFIYGGCGGNGNKFPTQ 110000000000010000000000000000000000110000000 EACMKRCAKA 0000000111 >Hypothetical protein CPE0013; SWP:Q0SWX0; PDB:2JOVA MHKDIFTSVVRVRGSKKYNVVPVKSNKPVEISKWIDFSNVLSRLY 543322222223334343332211222222332232223223333 VGVPTKSGNVVCKNIMNTGVDIICTKNLPKDSLEHHHHHH 2323333322222223322211123333334322356899 >50S ribosomal protein L14e; SWP:Q980C1; PDB:2JOYA MPAIEVGRICVKVKGREAGSKCVIVDIIDDNFVLVTGPKDITGVK 421110000011122332111000111111111111111111111 RRRVNILHLEPTDKKIDIQKGASDEEVKKKLEESNLTEYMKEKIK 111111111111111111111111111111111111111111112 IRMPTL 346899 >Hypothetical protein yxeF; SWP:P54945; PDB:2JOZA MIMVSGCQQQKEETPFYYGTWDEGRAPGPTDGVKSATVTFTEDEV 999999999987654333333456667778998865433345554 VETEVMEGRGEVQLPFMAYKVISQSTDGSIEIQYLGPYYPLKSTL 455679999987777766667777677665556789989976444 KRGENGTLIWEQNGQRKTMTRIESKTGREEKDEKSKSLEHHHHHH 456786543334554444455677888889999999999999999 >Gag-Pol polyprotein; SWP:NA; PDB:2JO0A MSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAMTETL 998765677776666655654454344333323222232333333 LVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVL 223334444555567667765443322222334343445789 >Putative G-nucleotide exchange factor; SWP:NA; PDB:2JOKA TGDAKQAIRHFVDEAVKQVAHARTPEIRQDAEFGRQVYEATLCAI 332212211111111111111111221222221111111100100 FSEAKDRFCMDPATRAGNVRPAFIEALGDAARATGLPGADKQGVF 010011111112212222111111111111111111111223321 TPSGAGTNPLYTEIRLRADTLMGAELAARPEYRELQPYARQQAID 112321121111111111122222222222211111110000000 LVANALPAERSNTLVEFRQTVQTLEATYRRAAQDASRDEKGATNA 111111111111100100111111111112222222223334567 ADGA 9999 >Churchill protein; SWP:NA; PDB:2JOXA CGDCVEKEYPNRGNTCLENGSFLLNFTGCAVCSKRDFMLITNKSL 000000000000000000000000000000000000000000000 KEEDGEEIVTYDHLCKNCHHVIARHEYTFSIMDEFQEYTMLCLLC 000000000000000000000000000000000000000000000 GKAEDTISILPDDPRQ 0000000000011111 >Hypothetical protein Ta0095; SWP:NA; PDB:2JOIA MREYPVKKGFPTDYDSIKRKISELGFDVKSEGDLIIASIPGISRI 000000000000000000000000000000000000000000000 EIKPDKRKILVNTGDYDSDADKLAVVRTYNDFIEKLTGYSAKERK 000000000000000001000000000000000000000000011 KMMTKD 112124 >Sprouty-related, EVH1 domain-containing protein 2; SWP:Q3C2P8; PDB:2JP2A GSMTEETHPDDDSYIVRVKAVVMTRDDSSGGWFPQEGGGISRVGV 999764224432111111111001112222101112222111111 CKVMHPEGNGRSGFLIHGERQKDKLVVLECYVRKDLVYTKANPTF 111122233331101011122322111110111111110111110 HHWKVDNRKFGLTFQSPADARAFDRGVRKAIEDLIE 000112211000011111111111111111111112 >SsrB; SWP:O54305; PDB:2JPCA LRERQVLKLIDEGYTNHGISEKLHISIKTVETHRMNMMRKLQVHK 000000000000010000000010000000000000000000000 VTELLNCARRMRLIEY 0000000001345455 >Nuclear inhibitor of protein phosphatase 1; SWP:A2ADR8; PDB:2JPEA MAAAVNSGSSLPLFDCPTWAGKPPPGLHLDVVKGDKLIEKLIIDE 986543322222111111111111111100001111111111111 KKYYLFGRNPDLCDFTIDHQSCSRVHAALVYHKHLKRVFLIDLNS 111111111221111111111111111000001110000001111 THGTFLGHIRLEPHKPQQIPIDSTVSFGASTRAYTLREKPQT 111000111111110000001100000111000000011122 >UPF0352 protein VP2129; SWP:Q87MV2; PDB:2JPQA MPITSKYTDEQVEKILAEVALVLEKHAASPELTLMIAGNIATNVL 753212111211111111112222222221111111111111222 NQRVAASQRKLIAEKFAQALMSSLETPKTHLEHHHHHH 22222222222112111211222222222334789999 >mRNA export factor MEX67; SWP:Q99257; PDB:2JP7A RLNPVQLELLNKLHLETKLNAEYTFMLAEQSNWNYEVAIKGFQSS 100000000000000000000000000000000000000000001 MNGIPREAFVQF 110000000001 >ATP-dependent DNA helicase uvsW; SWP:Q06EE5; PDB:2JPNA GSHMLLEFKQFLYEASIDEFMGKIASCQTLEGLEELEAYYKKRVK 764333211111111111111100110000000000011011111 ETELKDTDDISVRDALAGKRAELEDSDDEVEESF 1110000000000000010111111111234345 >Translational repressor; SWP:NA; PDB:2JPPA MLILTRKVGESINIGDDITITILGVSGQQVRIGINAPKDVAVHRE 000000000000000000000000000000000000000000000 EIYQRIQA 00000011 >SEC-C motif; SWP:Q6N568; PDB:2JQ5A MNCVCGSGKTYDDCCGPLLARTRSAASPEALMRSRYAAYALKDFD 110000110000000000000000000000000000000000000 YIVETTDPERRDLFDHDVNRAWMEESDFLELRVLGSSEKGSRGTV 000000000000000000000000000000000000000000000 EFIARFRRGGGPEQSHHERSQFRKARGRWYFSEGEAVD 00000000111000000000000000000000000012 >Hypothetical protein yobA; SWP:O31835; PDB:2JQOA MNKNEQNGDETKMQSLVGYVVLKDNERAILITDTKAPGKEDYNLS 999875432222222111011112211100011122222222222 EGQLMNKFKNNIVIVGLSEIDNTDDLKRGEKIKVWFHTRKESNPP 222112212111111112222222222211111111222222221 SATIQKYELLLEHHHHHH 111111112223457999 >Weak toxin 1; SWP:Q8AY51; PDB:2JQPA LTCLICPEKDCQKVHTCRNEEKICVKRFYDKNQLGWRAQRGCAVS 000000001000000001000000000000123210000000000 CPKAKPNETVQCCSTDKCNK 00000000000000000000 >AIG2 protein-like; SWP:NA; PDB:2JQVA STSSDPQSHNVFVYGSILEPAVAAVILDRTADTVPAVLHGYHRYK 999999986533357989999999999999999886668977689 LKGLPYPCIVSSDSGKVNGKVITGVSDAELNNFDVIEGNDYERVT 999999988999998644555578667776787999999999889 VEVVRMDNSEKVKVETYVWVNKDDPRMYGEWDFEEWRVVHAEKFV 898999999999965569999999999999987766555444445 ETFRKMLEWNKNPNGKSMEEAVGSLLSSGD 445555665677887667776789999999 >E3 ubiquitin-protein ligase SMURF2; SWP:NA; PDB:2JQZA GPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVK 000000000000000000000000000000000111000000000 NTLDPKWNQHYDLYIGKSDSVTISVWNHKKIHKKQGAGFLGCVRL 000000000000000000000000000000000010000000000 LSNAINRLKDTGYQRLDLCKLGPNDNDTVRGQIVVSLQSRD 00000000000000000000011212100000000000001 >UPF0350 protein VC_2471; SWP:A3H522; PDB:2JR5A MYTAEQKARIKWACRRGMLELDVVIMPFFEECFDSLTESEQDDFV 111221121111112332221122111111211221111111111 ALLESDDPDLFAWVMGHGRCENLGLAAMVDKIVAHNLSKVRLEHH 111111111111112222111111111111111222222223223 HHHH 4579 >UPF0434 protein NMA0874; SWP:A1KST5; PDB:2JR6A MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPYM 997654543223223222111221100111211100011111111 LENEARPLSEEELKALEHHHHHH 22221111111111112234578 >ORF 1 protein; SWP:Q61786; PDB:2JRBA FSPETMKARRAWTDVIQTLREHKCQPRLLYPAKLSITIDGETKVF 000000000000000000000000000000000000000000000 HDKTKFTQYLSTNPALQRII 00000000000000000001 >Ring finger and CHY zinc finger domain containing protein 1; SWP:Q86X26; PDB:2JRJA ENVSQQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYR 432111100001000010000000000000000000000000000 CPLCMHS 0001123 >Ribosome modulation factor; SWP:Q87PC4; PDB:2JRMA MKRQKRDRLERAQSQGYKAGLNGRSQEACPYQQVDARSYWLGGWR 543100000000000000000000000000000000000000000 DARDEKQSGLYKLEH 000000111245689 >Putative cytoplasmic protein; SWP:Q57LJ1; PDB:2JRPA MEITCPVCHHALERNGDTAHCETCAKDFSLQALCPDCRQPLQVLK 432223333322112211111222211111111122232221222 ACGAVDYFCQNGHGLISKKRVNFVISDQLEHHHHHH 333221111222222222221111223444334689 >Uncharacterized protein; SWP:Q5LLS5; PDB:2JRRA MTIQAPETKIVDKSRVACDGGEGALGHPRVWLQIPEDTGWVECPY 754322111111111111234444322221111112211111122 CDCKYVLKGSKADALEHHHHHH 2211111122212223446789 >UPF0352 protein yejL; SWP:NA; PDB:2JRXA MPQISRYSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNLI 664434455654565566566667777766655444333222211 NTSIAPAQRQAIANSFARALQSSINEDKAHLEHHHHHH 12212232222122223333444455433223578999 >Uncharacterized protein; SWP:NA; PDB:2JROA MRVFPVYAPKLIVKHARIFLTGVIWVKDLGRLEFEKGRFLLPRKS 100011111110111011000000000000000001111112222 LPKVKQAILELNELIEAQNHQTKTALEHH 11111111111111111111135689999 >RNA-binding protein 39; SWP:NA; PDB:2JRSA MGHHHHHHSHMAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRG 999999999999999999865433222111001111100111111 IFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 112222222111112233332111001112222222221122111 FELAGRPMKVGHVTERTD 111111111112234578 >Uncharacterized protein; SWP:NA; PDB:2JRTA MYLKRVDGPRQVTLPDGTVLSRADLPPLDTRRWVASRKAAVVKAV 765432221111111111101110000111110000000000000 IHGLITEREALDRYSLSEEEFALWRSAVAAHGEKALKVTMIQKYR 111111111011111111100000000011112222343222223 QLHHH 34579 >Virulence regulator; SWP:NA; PDB:2JR1A FNVKQKSEITALVKEVTPPRKAPSKAKREAPIKYWLPHSGATWSG 210000000000001111110000000000000000000000000 RGKIPKPFEAWIGTAAYTAWKAKHPDEKFPAFPG 0000000000000000000000000000000000 >UPF0434 protein BB2007; SWP:Q7W7F8; PDB:2JS4A MESRLLDILVCPVCKGRLEFQRAQAELVCNADRLAFPVRDGVPIM 998765543334544432233554321223332221233443223 LEAEARSLDAEAPAQPSLEHHHHHH 3444333345566777899999999 >Uncharacterized protein; SWP:NA; PDB:2JS5A MSEGAEELKAKLKKLNAQATALKMDLHDLAEDLPTGWNRIMEVAE 432111111111111111111111112112211111111111111 KTYEAYRQLDEFRKSTASLEHHHHHH 11111111111112212221222357 >Transcriptional regulator Rv1994c/MT2050; SWP:NA; PDB:2JSCA LARLGRALADPTRCRILVALLDGVCYPGQLAAHLGLTRSNVSNHL 111111111111111100000110011111111111111111111 SCLRGCGLVVATYEGRQVRYALADSHLARALGELVQVVLAVDTDQ 111111100011122211100000000000011111111112222 PCVAER 222234 >Polymyxin resistance protein pmrD; SWP:NA; PDB:2JSOA MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDL 000000000000000000000000000000000000000000000 LSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCKVAGKTQ 0000000000000000000000000000000000000001123 >Protein napD; SWP:NA; PDB:2JSXA MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLI 777665433222233454344323322333322222334543211 VVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETPRSH 123346666545433432343433333344555545444567899 HHHHH 99999 >Transcriptional regulatory protein ros; SWP:NA; PDB:2JSPA AVNVEKQKPAVSVRKSVQDDHIVCLECGGSFKSLKRHLTTHHSMT 865543211011111000110000011111111111112221222 PEEYREKWDLPVDYPMVAPAYAEARSRLAKEMGLGQRRKANR 111111111111111111112222234323222234679999 >Myomesin-1; SWP:NA; PDB:2JTDA EEEMKRLLALSQEHKFPTVPTKSELAVEILEKGQVRFWMQAEKLS 321111110011111222110001000000111100000001111 SNAKVSYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGT 111000000000000111000001111100000001011111000 YTFQIQDGKATGHSTLVLIGDVYKKLQKEAEF 00000011110000000001100000001111 >PefI protein; SWP:NA; PDB:2JT1A MSESIVTKIISIVQERQNMDDGAPVKTRDIADAAGLSIYQVRLYL 642110000000000000011100000000000000000000000 EQLHDVGVLEKVNAGKGVPGLWRLLE 00000000000013333221000012 >Putative uncharacterized protein; SWP:NA; PDB:2JTVA MATADDFKLIRDIHSTGGRRQVFGSREQKPFEDLVDLGWLKRSSV 100000000000000000000001000000000000000000000 DSRATHYQITERGTSAALRS 11100000000000000012 >Phosphatidylinositol 4-kinase PIK1; SWP:NA; PDB:2JU0B ASYGFQVARRVLNNLQTNLFNTSSGSDKNVKIHENVAPALVLSSM 321111111111111112222222322322222111111111111 IMSAIAF 1111235 >Erythronolide synthase; SWP:NA; PDB:2JU1A GSHMLRDRLAGLPRAERTAELVRLVRTSTATVLGHDDPKAVRATT 754323224555677556534433432332232345669889999 PFKELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFL 999977999989998998899899999999999999999999999 DAELG 99999 >UPF0352 protein HI0840; SWP:NA; PDB:2JUZA MAQHSKYSDAQLSAIVNDMIAVLEKHKAPVDLSLIALGNMASNLL 986543333333333333334444444333333333223222322 TTSVPQTQCEALAQAFSNSLINAVKTRLEHHHHHH 22222221111111111111111112222223468 >p53-associated parkin-like cytoplasmic protein; SWP:NA; PDB:2JUFA YGEYVQQTLQPGMRVRMLDDYEEISAGDEGEFRQSNNGIPPVQVF 000000000000000000000000000000000000100000000 WQSTGRTYWVHWHMLEILG 0000000000000000001 >Peptidyl-tRNA hydrolase domain protein; SWP:NA; PDB:2JVAA MLVISNNVHLPDAEIELTAIRAQGAGGQNVNKVSSAMHLRFDINA 111112211111111111111112234322211111000001111 SSLPPFYKERLLALNDSRITSDGVIVLKAQQYRTQEQNRADALLR 111111111111111111111111010101111101100000000 LSELIVNAAKLEHHHHHH 001001111112234578 >Uncharacterized protein; SWP:NA; PDB:2JVMA MRRQPKTRQESARMSIEAPETVVVSTWKVACDGGEGALGHPRVWL 999999998765555554433222333322233455544444343 SIPHETGFVECGYCDRRYIHESFAAAKLEHHHHHH 33445433344444433223344455689999999 >Uncharacterized protein; SWP:NA; PDB:2JVWA MALIMTQQNNPLHGITLQKLLTELVEHYGWEELSYMVNINCFKKD 999998654455554433322444555656765676565655777 PSIKSSLKFLRKTDWARERVENIYLKLQRHKERNQLE 6545433433444443344234334544565556789 >KISTRIN; SWP:P30403; PDB:1N4YA GKECDCSSPENPCCDAATCKLRPGAQCGEGLCCEQCKFSRAGKIC 310000000000000000000000000000000000000000000 RIPRGDMPDDRCTGQSADCPRYH 01112211000000000000002 >Partitioning-defective 3 homolog; SWP:NA; PDB:2NS5A SEFKVTVCFGRTRVDVPCGDGRMKVFSLIQQAVTRYRKAVAKDPN 100000000000000000000000000000000000000000000 YWIQVHRLEHGDGGILDLDDILCDVADDKDRLVAVFDEQD 0000000000000000000000000000000000000001 >Mating pheromone En-1; SWP:NA; PDB:2NSVA NPEDWFTPDTCAYGDSNTAWTTCTTPGQTCYTCCSSCFDVVGEQA 000000000000000000000000000000000000000000000 CQMSAQC 0000000 >Mating pheromone En-2; SWP:NA; PDB:2NSWA DIEDFYTSETCPYKNDSQLAWDTCSGGTGNCGTVCCGQCFSFPVS 000000000000000000000000000000000000000000000 QSCAGMADSNDCPNA 000000000000012 >Apoptosis regulator Bcl-X; SWP:Q2PFS6; PDB:2O2MA SQSNRELVVDFLSYKLSQKGYSAGGGGGGGGMAAVKQALREAGDE ---------------------------------000000000000 FELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIV 000000000000000000000000000000000000000000000 AFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENG 000000000000000000000000000000000000000000000 GWDTFVELYG 0000000000 >Interleukin-21; SWP:Q9HBE4; PDB:2OQPA MQGQDRHMIRMRQLIDIVDQLKNYVNDLVPEFLPAPEDVETNCEW 754322211111111111111111111111111122222222211 SAFSCFQKAQLKSANTGNNERIINVSIKKLKRKPPSTNAGRRQKH 111111111101111111111111110110111112212344322 RLTCPSCDSYEKKPPKEFLERFKSLLQKMIHQHLSSRTHGSEDS 22322223322221111111111111111112122346899999 >Disks large homolog 1; SWP:NA; PDB:2OQSA MEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKD 100000001000000000000000000000000000000000000 GKLQIGDKLLAVNNVCLEEVTHEEAVTALKNTSDFVYLKVAKPTG 000000000000000000000000000000000000000000111 SH 33 >Mannitol-specific cryptic phosphotransferase enzyme IIA component; SWP:NA; PDB:2OQ3A MRLSDYFPESSISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQA 000000000000000000000000000000000000000000000 IKDSTINNGPYYILAPGVAMPHARPECGALKTGMSLTLLEQGVYF 000000000000000000000000000000000000000000000 PGNDEPIKLLIGLSAADADSHIGAIQALSELLCEEEILEQLLTAS 010100000000000000000000000000000000000000000 SEKQLADIISRG 000000000000 >Tight junction protein ZO-2; SWP:NA; PDB:2OSGA MIGVLLMKSRANEEYGLRLGSQIFVKEMTRTGLATKDGNLHEGDI 100000001121100000000000000000000000000000000 ILKINGTVTENMSLTDARKLIEKSRGKLQLVVLRDSLE 00000000000000000000000000000000012568 >Ubiquitin; SWP:P61864; PDB:1OTRB MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIF 100000000000000000000000000000000000000000000 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 0000000000000000000000000012357 >Hydrogenase isoenzymes formation protein hypC; SWP:NA; PDB:2OT2A MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVG 654332222222222222223343333222222111222221112 QWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEEK 112234433222212222223333344444443333456789989 >Mu-like prophage FluMu protein gp35, Protein HI1507 in Mu-like prophage FluMu region; SWP:P44228; PDB:2OUTA GSHMDKTFCVVVQNRIKEGYRRAGFSFHLGDNSLAAVSESQLAQL 999999977678999999999999999999988899999989999 KADPRLVVQITETGSQEGGEGLSKEPAGSDEQKQLRADPPSTDLN 999999887778999999999999999999999999999999779 TFTVEQLKAQLTERGITFKQSATKAELIALFAPADGEKSEA 98999979988999999999999999777656899999999 >abiotic ATP-binding, folding optimized protein; SWP:NA; PDB:2P0XA GSFRVKPCVVCKVAPRDWRVKNRHLRIYNMCKTCFNNSIKSGDDT 987654323557754222222211110111233223223322332 YHGHVDWLMYTDAKEFSST 2211111223332223567 >designed engrailed homeodomain variant UVF; SWP:NA; PDB:2P6JA MKQWSENVEEKLKEFVKRHQRITQEELHQYAQRLGLNEEAIRQFF 432222211111100000011111221222222222221111100 EEFEQRK 0001234 >Apoptosis regulator Bcl-X; SWP:NA; PDB:2PONB MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEA 211000000000000000000000000011222331111100000 VKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNEL 000000000000000000000000000000000000000000000 FRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLN 000000000000000000000000000000000000000000000 DHLEPWIQENGGWDTFVELYG 000000000000000000001 >Thermonuclease; SWP:Q2FIK2; PDB:2PQEA ATSTKKLHKEAATLIKAIDGDTVKLMYKGQAMTFRLLLVDTAETK 976432100000000000000000000000000000000000112 HTKKGVEKYGAEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLA 222111100000000000000000000000000000000000000 YIYADGKMVNEALVRQGLAKVAYVYKGNNTHEQLLRKSEAQAKKE 000000000000000000000001111000000000000000000 KLNIWSEDNADSGQ 00000001245689 >Fatty acid-binding protein, liver; SWP:P07148; PDB:2PY1A GSMSFSGKYQLQSQENFEAFMKAIGLPEELIQKGKDIKGVSEIVQ 532110000000000000000000000000000000000000000 NGKHFKFTITAGSKVIQNEFTVGEECELETMTGEKVKTVVQLEGD 010000000111110000000000000000000000000000000 NKLVTTFKNIKSVTELNGDIITNTMTLGDIVFKRISKRI 000000010000000001100000000100000000011 >CREB-binding protein; SWP:P45481; PDB:1R8UB ATGPTADPEKRKLIQQQLVLLLHAHKCQRREQANGEVRACSLPHC 753221111111111100000000011111122222222111110 RTMKNVLNHMTHCQAGKACQVAHCASSRQIISHWKNCTRHDCPVC 000000000000111111111100000000000111112211111 LPLKNASDKR 1111111112 >Polypyrimidine tract-binding protein 1; SWP:P26599; PDB:1SJQA SGVPSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAF 431110000000000000000000000000000000000100000 IEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSS 0000000000000000000000010000000011121123567 >APOPTOSIS-STIMULATING OF P53 PROTEIN 2; SWP:NA; PDB:2UWQA GGSMMPMFLTVYLSNNEQHFTEVPVTPETICRDVVDLCKEPGESD 753211000000011100000000001000000000000011100 CHLAEVWCGSERPVADNERMFDVLQRFGSQRNEVRFFLRHE 00000000000000000000000000001000000000001 >UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 33; SWP:Q8TEY7; PDB:2UZGA RNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNLWACLENRCS 310000000000000000000000000000100100000000000 YVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDR 000000000000000000000000000000000000000000001 KLGTQ 23578 >CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 7; SWP:A2AJK6; PDB:2V0FA GSRNPNKLDINTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWL 421000000000000000000000000000100000000000000 EENPEFAVAPDWTDIVKQSGFVPESMFDRLLTGPVVRGEGAS 000000000000000000000000000000001111124689 >POLYBROMO-1; SWP:NA; PDB:2YQDA GSSGSSGKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRL 999876554333333222222211111111122221111111111 PSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMF 223332222222222111111122222333332222212111110 NNACTYNEPESLIYKDALVLHKVLLETRRD 111111111211111111111111222234 >Desmoglein-2; SWP:NA; PDB:2YQGA GSSGSSGQKRAWITAPVALREGEDLSKKNPIAKIHSDLAEERGLK 999876654321211111111111111111111111222222222 ITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREETPFFLLTG 110001111111111110000111100111111111111111111 YALDARGNNVEKPLELRIKVLDINDNEPVFTQD 111111111111111111111111122344678 >Arginine-glutamic acid dipeptide repeats protein; SWP:NA; PDB:2YQKA GSSGSSGIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETG 999998643110000000000000000000000000000000000 ELITFYYYWKKTSGPSSG 000000000012458999 >Probable ATP-dependent RNA helicase DDX59; SWP:NA; PDB:2YQPA GSSGSSGFSKTQRWAEPGEPICVVCGRYGEYICDKTDEDVCSLEC 999997432211111122110001111111111111100111221 KAKHLLQVKEKEEKS 111111111112356 >KIAA0907 protein; SWP:NA; PDB:2YQRA GSSGSSGGMHYVQDKLFVGLEHAVPTFNVKEKVEGPGCSYLQHIQ 997654322111111111112222111111111011111111111 IETGAKVFLRGKGSGCIEPASGREAFEPMYIYISHPKPEGLAAAK 111111000111111122222222121111101111111111111 KLCENLLQTVHAEYSRFVNQINTAVPLPG 11111112212222222222322357999 >Myosin light chain kinase, smooth muscle; SWP:NA; PDB:2YR3A GSSGSSGMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITW 865322111100000000000000000000000000000000000 LLNGQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAENALGQV 000000000000000000000000000000000000000000000 SCSAWVTVH 000000000 >Seizure 6-like protein isoform 3; SWP:NA; PDB:2YRAA GSSGSSGCSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGS 865321000000001100001111100000000001111111110 DTLTCQWDLSWSSDPPFCEKTEESGPSSG 00000011000000001111122234468 >Protein fantom; SWP:NA; PDB:2YRBA GSSGSSGDETIHLERGENLFEIHINKVTFSSEVLQASGDKEPVTF 999999999754312211111100100000110111111110000 CTYAFYDFELQTTPVVRGLHPEYNFTSQYLVHVNDLFLQYIQKNT 000011100000000010001111111111111122111111111 ITLEVHQAYSTEYETIAACQLKFHEILEKSGRIFCTASLIGTKGD 000000011221110000000111111211111111000001111 IPNFGTVEYWFRLRVSGPSSG 010000000111111123579 >F-box only protein 30; SWP:NA; PDB:2YREA GSSGSSGMEEELQHSHCVNCVSRRCMTRPEPGISCDLIGCPLVCG 865432222111111111111111111111221111111111111 AVFHSCKADEHRLLCPFERVPCLNSDFGCPFTMARNKVAEHLEMC 100011111101100111111111122211111111111111111 PASVSGPSSG 1112234579 >Zinc finger protein 473; SWP:NA; PDB:2YRHA GSSGSSGKKPLVCNECGKTFRQSSCLSKHQRIHSGEKPSGPSSG 75433333211111111001112211111111113579999999 >Zinc finger protein 473; SWP:NA; PDB:2YRJA GSSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS 999754322222222223221112232122222222333446789 G 9 >Zinc finger homeobox protein 4; SWP:NA; PDB:2YRKA GSSGSSGGTDGTKPECTLCGVKYSARLSIRDHIFSKQHISKVRET 765443333322221222222222232212211221111222233 VGSQLDREKD 3333345799 >KIAA1837 protein; SWP:NA; PDB:2YRLA GSSGSSGQADAGPDKELTLPVDSTTLDGSKSSDDQKIISYLWEKT 976533211000000000000000000011112221100000000 QGPDGVQLENANSSVATVTGLQVGTYVFTLTVKDERNLQSQSSVN 000100000000000000000000000000000111111110000 VIVKEESGPSSG 000001112468 >B-cell lymphoma 6 protein; SWP:NA; PDB:2YRMA GSSGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG 8876443222111222211122232223223333333235568 >Pleckstrin homology domain-containing family A member 6; SWP:NA; PDB:2YRYA GSSGSSGGKRSHSMKRNPNAPVTKAGWLFKQASSGVKQWNKRWFV 999997543344433334433332211111122333322111111 LVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKA 223221112222323322222223322222233333332321111 EHAGVRTYFFSAESPEEQEAWIQAMGEAARVQ 23333221111222332222222222322344 >Unc-112-related protein 2; SWP:NA; PDB:2YS3A GSSGSSGIPELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKS 765321100000000000001222221000000000000000000 QDEAPGDPIQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEGMSEI 011000000000000000000000000000000000001110000 YLRCQDEQQYARWMAGCRLASKGRTMADSSYTSEVQAILAFLSLQ 000000000000000000000000000110000000000000001 RT 11 >Rab-related GTP-binding protein RabJ; SWP:NA; PDB:2YS8A GSSGSSGSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVN 999999753212221111111111111100000000111111111 KAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGPSSG 111111111112222211111111100110111111112356799 >Homeobox and leucine zipper protein Homez; SWP:NA; PDB:2YS9A GSSGSSGPLPIPPPPPDIQPLERYWAAHQQLRETDIPQLSQASRL 999876555444444333333333343332222222222233322 STQQVLDWFDSRLPQPAEVSGPSSG 2222223334444555555678999 >Salvador homolog 1 protein; SWP:NA; PDB:2YSBA GSSGSSGEDLPLPPGWSVDWTMRGRKYYIDHNTNTTHWSHPLESG 644322211111111000011111100000111111111111222 PSSG 3357 >Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; SWP:NA; PDB:2YSDA GSSGSSGAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPR 999765433333332332222223343322122333322222222 CLNKQQSGPSSG 333445557899 >Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; SWP:NA; PDB:2YSEA GSSGSSGLDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVL 543333211101111111001112111100011111111111111 EAKRKKQLESGPSSG 111112222334468 >E3 ubiquitin-protein ligase Itchy homolog; SWP:NA; PDB:2YSFA GSSGSSGLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTG 7542111111000000011100000001000000000112 >Syntaxin-binding protein 4; SWP:NA; PDB:2YSGA GSSGSSGLPYGWEEAYTADGIKYFINHVTQTTSWIHPVMS 7643211111000000111110000011110000011122 >Growth-arrest-specific protein 7; SWP:NA; PDB:2YSHA GSSGSSGLPPGWQSYLSPQGRRYYVNTTTNETTWERPSSS 7542222111100000011111000011110111111134 >Transcription elongation regulator 1; SWP:NA; PDB:2YSIA GSSGSSGTEEIWVENKTPDGKVYYYNARTRESAWTKPDGV 7653322322111111122111100011111111122333 >Tripartite motif-containing protein 31; SWP:NA; PDB:2YSLA GSSGSSGMASGQFVNKLQEEVICPICLDILQKPVTIDCGHNFCLK 999999999986432233322212222222222122222111122 CITQIGETSCGFFKCPLCKTSVRKNAIR 2122223433211112223222223457 >Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; SWP:NA; PDB:2YSMA GSSGSSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLK 998653211111222221111100011110111111111111111 RAGWQCPECKVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKS 111000010001111111110100001111010000011111011 VPTNGWKCKNCRICISGPSSG 112211111112223335689 >Zinc finger protein 95 homolog; SWP:NA; PDB:2YSOA GSSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSS 999876543211111222111111111111112222212468999 G 9 >Zinc finger protein 224; SWP:NA; PDB:2YSPA GSSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS 754322222221111222221111121111111112234799999 G 9 >Rho guanine nucleotide exchange factor 9; SWP:NA; PDB:2YSQA GSSGSSGDSIVSAEAVWDHVTMANRELAFKAGDVIKVLDASNKDW 765432222211111111122333221111111111122233222 WWGQIDDEEGWFPASFVRLWVNQEDEVEEGSGPSSG 111112212221112111122223345799999999 >DEP domain-containing protein 1; SWP:NA; PDB:2YSRA GSSGSSGYRATKLWNEVTTSFRAGMPLRKHRQHFKKYGNCFTAGE 543222111111000000000111122221212221111100000 AVDWLYDLLRNNSNFGPEVTRQQTIQLLRKFLKNHVIEDIKGRWG 000000000000000000000000000000000000000011111 SENVDDNNQLFRFPA 110000110000011 >Protocadherin-7; SWP:NA; PDB:2YSTA GSSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGV 999976532100000000000000000000000000011223432 NGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDREEVNQLRFT 321000000000000000000000000000000000000000000 VMARDRGQPPKTDKATVVLNIKDENDNVP 00000111100000000000000011347 >zinc finger-containing protein 1; SWP:NA; PDB:2YT9A GSSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRF 999765445677775545568646755665554554335554445 KRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 766654443344556667676569986556999987999999999 GPSSG 99999 >Zinc finger protein 32; SWP:NA; PDB:2YTAA GSSGSSGEKPYQCKECGKSFSQRGSLAVHERLHTGSGPSSG 86432100000000000000000000000000000246777 >Zinc finger protein 32; SWP:NA; PDB:2YTBA GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG 543222221110011222110112221222232233445677 >Pre-mRNA-splicing factor RBM22; SWP:NA; PDB:2YTCA GSSGSSGEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVV 876543211100000000000000000000000000000000000 QRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGR 0000000000000000000010011100000000000001 >Zinc finger protein 473; SWP:NA; PDB:2YTDA GSSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS 643333333222122223221121111111111222222467999 G 9 >Zinc finger protein 473; SWP:NA; PDB:2YTEA GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG 754322221111122221111111101111111112347899 >Zinc finger protein 268; SWP:NA; PDB:2YTFA GSSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS 976543332111111222111111111111122222223468999 G 9 >Zinc finger protein 95 homolog; SWP:NA; PDB:2YTGA GSSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS 765433322222112333221122232222223334443334567 G 8 >Zinc finger protein 224; SWP:NA; PDB:2YTHA GSSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS 987533222321111232211111111122223334568999999 G 9 >Zinc finger protein 484; SWP:NA; PDB:2YTJA GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS 865433332323222333222222222122122223343456899 G 9 >Zinc finger protein 347; SWP:NA; PDB:2YTKA GSSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS 998766543200000000000000000000000000134578999 G 9 >Zinc finger protein 347; SWP:NA; PDB:2YTNA GSSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 543332332221111222211111121122122223332346899 G 9 >Zinc finger protein 484; SWP:NA; PDB:2YTOA GSSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS 865433333322222333322221111112112223334679999 G 9 >Zinc finger protein 484; SWP:NA; PDB:2YTPA GSSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS 865433332322122333322222122112112222346789999 G 9 >Zinc finger protein 268; SWP:NA; PDB:2YTQA GSSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS 764444444322211222211122222122222223222467999 G 9 >Zinc finger protein 484; SWP:NA; PDB:2YTSA GSSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS 998765432111112333221122221122122233333345678 G 9 >DNA-directed RNA polymerase III 39 kDa polypeptide F variant; SWP:NA; PDB:2YU3A GSSGSSGGQLDLLRSNTGLLYRIKDSQNAGKMKGSDNQEKLVYQI 999999865445566654321123445444433333443343233 IEDAGNKGIWSRDVRYKSNLPLTEINKILKNLESKKLIKAVKSVS 233333222334445655666554443222212333211223456 GPSSG 89999 >E3 SUMO-protein ligase NSE2; SWP:NA; PDB:2YU4A GSSGSSGFTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQKR 976532111101111111110000000000011000000111111 KKKAYCPQIGCSHTDIRKSDLIQDEALRRAIENHNKKRHRHSESG 111000001111110000100011111111112222222345799 PSSG 9999 >Zinc finger protein 473; SWP:NA; PDB:2YU5A GSSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG 86433444332221122222212111101111111222457899 >YTH domain-containing protein 2; SWP:NA; PDB:2YU6A GSSGSSGVRYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFW 754321000000000000000000000000000000000000000 ESSIVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFK 000000000000110000000000000000000000000000000 VEWIRKESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLL 000000000000000000000000000000000000000000000 QLWERL 000000 >Zinc finger protein 347; SWP:NA; PDB:2YU8A GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS 654443322221111111111111122122222222233468999 G 9 >Williams-Beuren syndrome chromosome region 18 protein; SWP:NA; PDB:2YUAA GSSGSSGSQGDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLY 987655444333333444344445555666565555545555665 HPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSDEDLR 666766655544333333333333444554555556555444333 GPGSGPSSG 344456679 >YTH domain-containing protein 1; SWP:NA; PDB:2YUDA GSSGSSGVRAVRKDQTSKLKYVLQDARFFLIKSNNHENVSLAKAK 999999998643221111111111110000000000000000000 GVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFARLSSES 000000000000000001111000000000110000000000000 HHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNP 001100000001111000000000000000000011111111111 WNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRH 111110000000000001110111111111111111111111112 >Protein neuralized; SWP:NA; PDB:2YUEA GSSGSSGPLQFHSVHGDNIRISRDGTLARRFESFCRAITFSARPV 765432100000000000000000000000111110000000000 RINERICVKFAEISNNWNGGIRFGFTSNDPVTLEGTLPKYACPDL 000000000000001111110000000000000000000000000 TNRPGFWAKALHEQYCEKDNILYYYVNGAGDVIYGINNEEKGVIL 000000000000000000000000000000000000000000000 TGIDTRSLLWTVIDIYGNCTGIEFLDSRIYMYQ 000000000000000010000000000000011 >Zinc finger ZZ-type-containing protein 3; SWP:NA; PDB:2YUMA GSSGSSGNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGN 999875321110110010000000000111111000000000011 RTAKQVASQVQKYFIKLTKAGIPVSGPSSG 000000000011111112244345799999 >RUN and TBC1 domain containing 3; SWP:NA; PDB:2YUOA GSSGSSGRRAKALLDFERHDDDELGFRKNDIITIISQKDEHCWVG 986422111111111111111110001111100111111111000 ELNGLRGWFPAKFVEVLDERSKEYSIASGPSSG 001111000111111112232235789999999 >Vinexin; SWP:NA; PDB:2YUPA GSSGSSGKPPTYQVLEYGEAVAQYTFKGDLEVELSFRKGEHICLI 999999998875433211111111111122211111111110011 RKVNENWYEGRITGTGRQGIFPASYVQVSREPRLRLCDDSGPSSG 122222111001122211111111111122222223334555679 >Tyrosine-protein kinase ITK/TSK; SWP:NA; PDB:2YUQA GSSGSSGEDNRRPLWEPEETVVIALYDYQTNDPQELALRRNEEYC 999875433333322333221111222222333221111221111 LLDSSEIHWWRVQDRNGHEGYVPSSYLVEKSPNNLETYEW 1212222211111122221111112111223433468999 >Discoidin domain-containing receptor 2; SWP:NA; PDB:2Z4FA NPAICRYPLGMSGGQIPDEDITASSQWSESTAAKYGRLDSEEGDG 211000000000000000000000000000000000000000000 AWCPEIPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFA 000000000000000000000000000000000001122221000 PMYKINYSRDGTRWISWRNRHGKQVLDGNSNPYDIFLKDLEPPIV 000000000110000000000000000001112000000000000 ARFVRFIPVTDHSMNVCMRVELYGCV 00000000000000000000000001 >ACYL CARRIER PROTEIN; SWP:P72393; PDB:2CNRA MAATQEEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMV 200000000000000000000000000000000000000000000 EVVVAAEERFDVKIPDDDVKNLKTVGDATKYILDHQA 0000000000000000000000000000000000001 >Tim15; SWP:NA; PDB:2E2ZA GSHMVDKPKMMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCK 654322110000000000000000000000000000000000000 VRHLIADHLKIFHDHHVTVEQLMKANGEQVSQDVGDLEFEDIPDS 000000000000000000000001111121221110000000001 LKDVLGKYAK 0000011122 >Nuclear pore complex protein Nup153; SWP:NA; PDB:2EBQA GSSGSSGVIGTWDCDTCLVQNKPEAIKCVACETPKPGTCVKRALT 998765443322223333222233333233333333344345679 LT 99 >Nuclear pore complex protein Nup153; SWP:NA; PDB:2EBRA GSSGSSGPEGSWDCELCLVQNKADSTKCLACESAKPGTKSGFKGF 997666543322222222111223221122221223333445679 DT 99 >Nucleoporin 50 kDa; SWP:NA; PDB:2EC1A EVKEEDAFYSKKCKLFYKKDNEFKEKGIGTLHLKPTANQKTQLLV 543210000000000000000000000000000000111000000 RADTNLGNILLNVLIPPNMPCTRTGKNNVLIVCVPNPPIDEKNAT 000111100000000000000000000000000000000001000 MPVTMLIRVKTSEDADELHKILLEKKDA 0000000000000000000000000111 >Kinesin-like protein KIF22; SWP:NA; PDB:2EDUA GSSGSSGEKAEDCWELQISPELLAHGRQKILDLLNEGSARDLRSL 999987643222211111111111110000000000011110111 QRIGPKKAQLIVGWRELHGPFSQVEDLERVEGITGKQMESFLKAN 111111111100111111100100100111111111101100110 ILGLAAGQ 11111233 >Kinesin-like protein KIF1B; SWP:NA; PDB:2EH0A GSSGSSGTPHLVNLNEDPLMSECLLYYIKDGITRVGQADAERRQD 976431100000000011111100000000000000001111000 IVLSGAHIKEEHCIFRSERSNSGEVIVTLEPCERSETYVNGKRVS 000111000000000000011111000000000000000000000 QPVQLRSGNRIIMGKNHVFRFNHPEQARAEREKTSGPSSG 0000000000000011000000000001112234689999 >B/K protein; SWP:NA; PDB:2ENPA GSSGSSGSKYQLGMLHFSTQYDLLHNHLTVRVIEARDLPPPISHD 976543221110000000000000000000000000000001122 GSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFE 222222111100000001111111001110110000000000000 IPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHW 000110110000000011121211100000001111110111100 WKALIPSGPSSG 000001123579 >B/K protein; SWP:NA; PDB:2EO2A GSSGSSGSTQTDKALYNRLVPLVNGVREFSEIQLSRLKKLGIHKT 765433223322222112111222211111110111111111111 DPSTLTEEEVRKFARLNIDPATITWQ 11111111111111111223333457 >MCTP2 protein; SWP:NA; PDB:2EP6A GSSGSSGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGND 999743222111110000000000000001110000000000111 RLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDKPPDF 000000000000000000000111111100000000000100000 LGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDLIYN 0000000000011100000000112111111100000000111 >Coatomer subunit zeta-1; SWP:Q8R3M1; PDB:2HF6A MEALILEPSLYTVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFE 876434322110000000000000000000001100001000000 KNIFNKTHRTDSEIALLEGLTVVYKSSIDLYFYVIGSSYENELML 000000000010000011000000000000000000111110100 MAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVIL 000000000000111111000000000000000000000000111 ESDPQQVVHRVALR 11111100100011 >Thioredoxin I; SWP:P22217; PDB:2I9HA MVTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSE 000000000000000000000000000001000000000000000 QYPQADFYKLDVDELGDVAQKNEVSAMPTLLLFKNGKEVAKVVGA 000000000000000000000000000000000000000000000 NPAAIKQAIAANA 0000000000000 >Cytochrome b5; SWP:NA; PDB:2I96A MAEQSDEAVKYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHP 998764322111222212211223211012211111223223333 GGEEVLREQAGGDATENFEDVGHSTDAREMSKTFIIGELHPDDRP 322111121111223333444444443343333221111223233 KLNKPPETLITTIDSSSS 444346899999999999 >PACTOLUS I-DOMAIN; SWP:Q3UV74; PDB:2IUEA DNSVDLYFLMGLSGSAQGHLSNVQTLGSDLLKALNEISRSGRIGF 100000000000001011111111221111111011100000000 GSIVNMTFQHILKLTADSSQFQRELRKQLVSGKLATPKGQLDAVV 000000000000000000000000000000000000000000000 QVAICLGEIGWRNGTRFLVLVTDNDFHLAKDKTLGTRQNTSDGRC 000000000000000000000000000000000000000000000 HLDDGMYRSRGEPDYQSVVQLASKLAENNIQPIFVVPSRMVKTYE 000000000000000000000000000000000000000000000 KLTTFIPKLTIGELSDDSSNVAQLIRNAYSKL 00000000000000122221111111111112 >Hypothetical lipoprotein ygdR; SWP:NA; PDB:2JN0A DYVMATKDGRMILTDGKPEIDDDTGLVSYHDQQGNAMQINRDDVS 310000000000001100000110000000000000000000000 QIIER 01134 >Nitrite reductase [NAD(P)H] small subunit; SWP:P0A9I9; PDB:2JO6A MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNI 210000000000000000000000000000000000000000000 DPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQF 011111100000000011100000001100000000000011011 SVKHYEARVKDGVVQLRGGS 00000000000000000023 >Protein prgI; SWP:Q57KQ1; PDB:2JOWA MATPWSGYLDDVSAKFDTGVDNLQTQVTEALDKLAAKPSDPALLA 997644433222222233222212222333444455555544443 AYQSKLSEYNLYRNAQSNTVKVFKDIDAAILEHHHHHH 33322221121112112212211111111111233568 >Conserved oligomeric Golgi complex subunit 2; SWP:P53271; PDB:2JQQA KTQSDLQKFMTQLDHLIKDDISNTQEIIKDVLEYLKKLDEIYGSL 000000000000000000000000000000000000000000001 RNHSQLTEALSLGKRLSKSLHEMCGIEPLEEEICSGLIEQLYKLI 111000000000000000000000001000000000000000000 TASRRILESCADSNSPYIHHLRNDYQDLLQEFQISLKILTEKCLE 000000000111111100000000000000000000000000111 NPSSLQNLSLTLVSIIKTA 1111110000001101135 >Vacuolar protein sorting-associating protein 4A; SWP:NA; PDB:2JQ9A TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHS 000000000000000000000000000000000000000000000 DKAKESIRAKCVQYLDRAEKLKDYLR 00000000000000000000000000 >Histone demethylase JARID1C; SWP:Q05CE7; PDB:2JRZA SMNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSL 211111111111110011001111111110000000000000000 SKIVVEEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERI 000000000000000000000000000011110000000000000 VYPYEMYQSGANLVCNTRPFDNEEKDK 000000111111111111111111123 >Nuclear protein localization protein 4 homolog; SWP:A2ACJ4; PDB:2PJHA AESIIIRVQSPDGVKRITATKRETAATFLKKVAKEFGFQNNGFSV 000000000000000000000000000000000000000000000 YINRNKTGEITASSSKSLHLLKIKHGDLLFL 0000000000000000000000000000000 >SCO2 protein homolog, mitochondrial; SWP:NA; PDB:2RLIA SFTGQGDFHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDEL 754332222222233322222212211111111222222222222 EKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHP 222222223233333222211111222233333332332233323 RLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLL 222222222322222222222222223233332222222211111 NPDGLFTDYYGRSRSAEQISDSVRRHMAAFRSVLS 11222221122232222222222222222223579 >Protein transport protein Sec23A; SWP:NA; PDB:2YRDA GSSGSSGEPVLCSRTTCRAALNPLCQVDYRAKLWACNFCYQRNQF 997542100000000000000000000000000000000000000 PPSYAGISELNQPA 00001111112458 >Nostrin; SWP:NA; PDB:2YUNA GSSGSSGRLCKALYSFQARQDDELNLEKGDIVIIHEKKEEGWWFG 865322211111111111211111111111111111121211000 SLNGKKGHFPAAYVEELPSNAGNTATKASGPSSG 1112111100111011122223344568999999